RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 REG1AP05451 166 aa12.19□□□□□ -0.46
NCKIPSD-204ENST00000416649 EFNB3Q15768 340 aa12.19□□□□□ -0.46
NCKIPSD-204ENST00000416649 Q5PR19 223 aa12.19□□□□□ -0.46
NCKIPSD-204ENST00000416649 ZNF645Q8N7E2 425 aa12.19□□□□□ -0.46
NCKIPSD-204ENST00000416649 CT55Q8WUE5 264 aa12.19□□□□□ -0.46
NCKIPSD-204ENST00000416649 C5orf30Q96GV9 206 aa12.19□□□□□ -0.46
NCKIPSD-204ENST00000416649 NAA38Q9BRA0 125 aaKnown RBP12.19□□□□□ -0.46
NCKIPSD-204ENST00000416649 LIFP15018 202 aa12.18□□□□□ -0.46
NCKIPSD-204ENST00000416649 SPACA3Q8IXA5 215 aa12.18□□□□□ -0.46
NCKIPSD-204ENST00000416649 VKORC1L1Q8N0U8 176 aa12.18□□□□□ -0.46
NCKIPSD-204ENST00000416649 DEFB125Q8N687 156 aa12.18□□□□□ -0.46
NCKIPSD-204ENST00000416649 SCCPDHQ8NBX0 429 aa12.18□□□□□ -0.46
NCKIPSD-204ENST00000416649 OR8B3Q8NGG8 313 aa12.18□□□□□ -0.46
NCKIPSD-204ENST00000416649 FAM168AQ92567 244 aa12.18□□□□□ -0.46
NCKIPSD-204ENST00000416649 TMEM70Q9BUB7 260 aa12.18□□□□□ -0.46
NCKIPSD-204ENST00000416649 PRDM14Q9GZV8 571 aa12.18□□□□□ -0.46
NCKIPSD-204ENST00000416649 TRBV6-6A0A0A6YYG2 114 aa12.18□□□□□ -0.46
NCKIPSD-204ENST00000416649 ANKRD30BLA7E2S9 258 aa12.18□□□□□ -0.46
NCKIPSD-204ENST00000416649 TFF1P04155 84 aa12.18□□□□□ -0.46
NCKIPSD-204ENST00000416649 OR10J4P0C629 311 aa12.18□□□□□ -0.46
NCKIPSD-204ENST00000416649 CD59P13987 128 aa12.18□□□□□ -0.46
NCKIPSD-204ENST00000416649 DSCR4P56555 118 aaPredicted RBP12.18□□□□□ -0.46
NCKIPSD-204ENST00000416649 NINJ1Q92982 152 aa12.18□□□□□ -0.46
NCKIPSD-204ENST00000416649 PMCHL2Q9BQD1 86 aa12.18□□□□□ -0.46
NCKIPSD-204ENST00000416649 PRRG4Q9BZD6 226 aa12.18□□□□□ -0.46
NCKIPSD-204ENST00000416649 PLEKHA3Q9HB20 300 aa12.18□□□□□ -0.46
NCKIPSD-204ENST00000416649 CEP295Q9C0D2 2601 aa12.18□□□□□ -0.46
NCKIPSD-204ENST00000416649 PIEZO2Q9H5I5 2752 aa12.18□□□□□ -0.46
NCKIPSD-204ENST00000416649 GAGE10A6NGK3 116 aa12.17□□□□□ -0.46
NCKIPSD-204ENST00000416649 APOA2P02652 100 aa12.17□□□□□ -0.46
NCKIPSD-204ENST00000416649 UQCRFS1P47985 274 aa12.17□□□□□ -0.46
NCKIPSD-204ENST00000416649 BRWD1-AS2P59051 145 aa12.17□□□□□ -0.46
NCKIPSD-204ENST00000416649 Q0VFX4 171 aa12.17□□□□□ -0.46
NCKIPSD-204ENST00000416649 LINC00173Q6ZV60 143 aa12.17□□□□□ -0.46
NCKIPSD-204ENST00000416649 MIR17HGQ75NE6 70 aa12.17□□□□□ -0.46
NCKIPSD-204ENST00000416649 IMMP1LQ96LU5 166 aa12.17□□□□□ -0.46
NCKIPSD-204ENST00000416649 FNDC4Q9H6D8 234 aaPredicted RBP12.17□□□□□ -0.46
NCKIPSD-204ENST00000416649 HES4Q9HCC6 221 aa12.17□□□□□ -0.46
NCKIPSD-204ENST00000416649 TNFRSF19Q9NS68 423 aa12.17□□□□□ -0.46
NCKIPSD-204ENST00000416649 KCNIP1Q9NZI2 227 aa12.17□□□□□ -0.46
NCKIPSD-204ENST00000416649 ABCA1O95477 2261 aa12.17□□□□□ -0.46
NCKIPSD-204ENST00000416649 C2orf70A6NJV1 201 aa12.17□□□□□ -0.46
NCKIPSD-204ENST00000416649 C9orf172C9J069 976 aa12.17□□□□□ -0.46
NCKIPSD-204ENST00000416649 OR7C2O60412 319 aa12.17□□□□□ -0.46
NCKIPSD-204ENST00000416649 CLDN18P56856 261 aa12.17□□□□□ -0.46
NCKIPSD-204ENST00000416649 RAC3P60763 192 aa12.17□□□□□ -0.46
NCKIPSD-204ENST00000416649 TBR1Q16650 682 aa12.17□□□□□ -0.46
NCKIPSD-204ENST00000416649 TMEM249Q2WGJ8 235 aa12.17□□□□□ -0.46
NCKIPSD-204ENST00000416649 KRTAP27-1Q3LI81 207 aa12.17□□□□□ -0.46
NCKIPSD-204ENST00000416649 STPG3Q8N7X2 389 aa12.17□□□□□ -0.46
NCKIPSD-204ENST00000416649 RFESDQ8TAC1 157 aa12.17□□□□□ -0.46
NCKIPSD-204ENST00000416649 CHRDL1Q9BU40 450 aa12.17□□□□□ -0.46
NCKIPSD-204ENST00000416649 WDR54Q9H977 334 aa12.17□□□□□ -0.46
NCKIPSD-204ENST00000416649 ZNF355PQ9NSJ1 428 aa12.17□□□□□ -0.46
NCKIPSD-204ENST00000416649 PPIAL4DF5H284 164 aa12.17□□□□□ -0.46
NCKIPSD-204ENST00000416649 OR9G9P0C7N8 305 aa12.17□□□□□ -0.46
NCKIPSD-204ENST00000416649 ACP1P24666 158 aa12.17□□□□□ -0.46
NCKIPSD-204ENST00000416649 CD24P25063 80 aa12.17□□□□□ -0.46
NCKIPSD-204ENST00000416649 SSR4P51571 173 aa12.17□□□□□ -0.46
NCKIPSD-204ENST00000416649 FOXA3P55318 350 aaPredicted RBP12.17□□□□□ -0.46
NCKIPSD-204ENST00000416649 COX19Q49B96 90 aa12.17□□□□□ -0.46
NCKIPSD-204ENST00000416649 ATP1A1-AS1Q5TC04 95 aa12.17□□□□□ -0.46
NCKIPSD-204ENST00000416649 PRAMEF5Q5TYX0 476 aa12.17□□□□□ -0.46
NCKIPSD-204ENST00000416649 PRAMEF6Q5VXH4 476 aa12.17□□□□□ -0.46
NCKIPSD-204ENST00000416649 C6orf15Q6UXA7 325 aaPredicted RBP12.17□□□□□ -0.46
NCKIPSD-204ENST00000416649 C12orf54Q6X4T0 127 aa12.17□□□□□ -0.46
NCKIPSD-204ENST00000416649 NPIPB11E5RHQ5 1161 aa12.16□□□□□ -0.46
NCKIPSD-204ENST00000416649 GNG3P63215 75 aa12.16□□□□□ -0.46
NCKIPSD-204ENST00000416649 SPINK14Q6IE38 97 aa12.16□□□□□ -0.46
NCKIPSD-204ENST00000416649 FAM216AQ8WUB2 273 aa12.16□□□□□ -0.46
NCKIPSD-204ENST00000416649 GALMQ96C23 342 aa12.16□□□□□ -0.46
NCKIPSD-204ENST00000416649 AKAP13Q12802 2813 aa12.16□□□□□ -0.46
NCKIPSD-204ENST00000416649 CSMD1Q96PZ7 3565 aa12.16□□□□□ -0.46
NCKIPSD-204ENST00000416649 LINC00473A8K010 186 aa12.16□□□□□ -0.46
NCKIPSD-204ENST00000416649 RFPL3SP0C7P2 107 aa12.16□□□□□ -0.46
NCKIPSD-204ENST00000416649 P0C879 139 aa12.16□□□□□ -0.46
NCKIPSD-204ENST00000416649 ZNF497Q6ZNH5 498 aa12.16□□□□□ -0.46
NCKIPSD-204ENST00000416649 MOB1BQ7L9L4 216 aa12.16□□□□□ -0.46
NCKIPSD-204ENST00000416649 PPP1R32Q7Z5V6 425 aa12.16□□□□□ -0.46
NCKIPSD-204ENST00000416649 OSTCQ9NRP0 149 aa12.16□□□□□ -0.46
NCKIPSD-204ENST00000416649 ZNF716A6NP11 495 aa12.15□□□□□ -0.46
NCKIPSD-204ENST00000416649 PRSS47A8MTI9 375 aa12.15□□□□□ -0.46
NCKIPSD-204ENST00000416649 MPDU1O75352 247 aa12.15□□□□□ -0.46
NCKIPSD-204ENST00000416649 WIPI1Q5MNZ9 446 aaPredicted RBP12.15□□□□□ -0.46
NCKIPSD-204ENST00000416649 Q6P435 159 aa12.15□□□□□ -0.46
NCKIPSD-204ENST00000416649 TRAT1Q6PIZ9 186 aa12.15□□□□□ -0.46
NCKIPSD-204ENST00000416649 LINC00696Q6ZRV3 163 aa12.15□□□□□ -0.46
NCKIPSD-204ENST00000416649 TPRX1Q8N7U7 411 aa12.15□□□□□ -0.46
NCKIPSD-204ENST00000416649 C11orf52Q96A22 123 aa12.15□□□□□ -0.46
NCKIPSD-204ENST00000416649 AP1S3Q96PC3 154 aa12.15□□□□□ -0.46
NCKIPSD-204ENST00000416649 SAP30LQ9HAJ7 183 aa12.15□□□□□ -0.46
NCKIPSD-204ENST00000416649 SMIM21Q3B7S5 101 aa12.15□□□□□ -0.46
NCKIPSD-204ENST00000416649 FAM71F2Q6NXP2 309 aa12.15□□□□□ -0.46
NCKIPSD-204ENST00000416649 FER1L6-AS1Q8NA97 138 aa12.15□□□□□ -0.46
NCKIPSD-204ENST00000416649 OR1B1Q8NGR6 318 aa12.15□□□□□ -0.46
NCKIPSD-204ENST00000416649 OR4A16Q8NH70 328 aa12.15□□□□□ -0.46
NCKIPSD-204ENST00000416649 LINC00479Q96M42 142 aa12.15□□□□□ -0.46
NCKIPSD-204ENST00000416649 HSD17B10Q99714 261 aaKnown RBP12.15□□□□□ -0.46
NCKIPSD-204ENST00000416649 SF3B5Q9BWJ5 86 aaKnown RBP12.15□□□□□ -0.46
NCKIPSD-204ENST00000416649 HINT2Q9BX68 163 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms