RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 OR4F17Q8NGA8 305 aa3.78□□□□□ -1.8
VPS41-205ENST00000414632 OR4D10Q8NGI6 311 aa3.78□□□□□ -1.8
VPS41-205ENST00000414632 OR51H1Q8NH63 302 aa3.78□□□□□ -1.8
VPS41-205ENST00000414632 MCFD2Q8NI22 146 aa3.78□□□□□ -1.8
VPS41-205ENST00000414632 ARPC1AQ92747 370 aa3.78□□□□□ -1.8
VPS41-205ENST00000414632 DIRAS2Q96HU8 199 aa3.78□□□□□ -1.8
VPS41-205ENST00000414632 ADTRPQ96IZ2 230 aa3.78□□□□□ -1.8
VPS41-205ENST00000414632 OR4F4Q96R69 305 aa3.78□□□□□ -1.8
VPS41-205ENST00000414632 PHB2Q99623 299 aa3.78□□□□□ -1.8
VPS41-205ENST00000414632 RBM38Q9H0Z9 239 aaKnown RBP3.78□□□□□ -1.8
VPS41-205ENST00000414632 ALX4Q9H161 411 aaPredicted RBP3.78□□□□□ -1.8
VPS41-205ENST00000414632 GNB4Q9HAV0 340 aa3.78□□□□□ -1.8
VPS41-205ENST00000414632 ZNF355PQ9NSJ1 428 aa3.78□□□□□ -1.8
VPS41-205ENST00000414632 CCDC59Q9P031 241 aaKnown RBP3.78□□□□□ -1.8
VPS41-205ENST00000414632 KLK11Q9UBX7 282 aa3.78□□□□□ -1.8
VPS41-205ENST00000414632 ANAPC10Q9UM13 185 aa3.78□□□□□ -1.8
VPS41-205ENST00000414632 TNCP24821 2201 aa3.78□□□□□ -1.8
VPS41-205ENST00000414632 TRAV3A0A0B4J244 114 aa3.77□□□□□ -1.81
VPS41-205ENST00000414632 C15orf62A8K5M9 175 aa3.77□□□□□ -1.81
VPS41-205ENST00000414632 SLC22A5O76082 557 aa3.77□□□□□ -1.81
VPS41-205ENST00000414632 S1PR2O95136 353 aa3.77□□□□□ -1.81
VPS41-205ENST00000414632 IGHG4P01861 327 aa3.77□□□□□ -1.81
VPS41-205ENST00000414632 PRH1P02810 166 aa3.77□□□□□ -1.81
VPS41-205ENST00000414632 SLPIP03973 132 aa3.77□□□□□ -1.81
VPS41-205ENST00000414632 CD3DP04234 171 aa3.77□□□□□ -1.81
VPS41-205ENST00000414632 RRASP10301 218 aa3.77□□□□□ -1.81
VPS41-205ENST00000414632 PSG1P11464 419 aa3.77□□□□□ -1.81
VPS41-205ENST00000414632 PSMB8P28062 276 aa3.77□□□□□ -1.81
VPS41-205ENST00000414632 GNRHRP30968 328 aa3.77□□□□□ -1.81
VPS41-205ENST00000414632 TPPP2P59282 170 aa3.77□□□□□ -1.81
VPS41-205ENST00000414632 UBE2KP61086 200 aa3.77□□□□□ -1.81
VPS41-205ENST00000414632 DLK1P80370 383 aa3.77□□□□□ -1.81
VPS41-205ENST00000414632 DEFA6Q01524 100 aa3.77□□□□□ -1.81
VPS41-205ENST00000414632 VMA21Q3ZAQ7 101 aa3.77□□□□□ -1.81
VPS41-205ENST00000414632 SCGB2B2Q4G0G5 96 aa3.77□□□□□ -1.81
VPS41-205ENST00000414632 ACTBL2Q562R1 376 aa3.77□□□□□ -1.81
VPS41-205ENST00000414632 ZNF660Q6AZW8 331 aaPredicted RBP3.77□□□□□ -1.81
VPS41-205ENST00000414632 FAM122CQ6P4D5 195 aa3.77□□□□□ -1.81
VPS41-205ENST00000414632 NRARPQ7Z6K4 114 aa3.77□□□□□ -1.81
VPS41-205ENST00000414632 ZNF695Q8IW36 515 aa3.77□□□□□ -1.81
VPS41-205ENST00000414632 SPAG16Q8N0X2 631 aa3.77□□□□□ -1.81
VPS41-205ENST00000414632 OR6F1Q8NGZ6 308 aa3.77□□□□□ -1.81
VPS41-205ENST00000414632 OR4S2Q8NH73 311 aa3.77□□□□□ -1.81
VPS41-205ENST00000414632 GIMAP1Q8WWP7 306 aa3.77□□□□□ -1.81
VPS41-205ENST00000414632 FCAMRQ8WWV6 532 aa3.77□□□□□ -1.81
VPS41-205ENST00000414632 HSD17B10Q99714 261 aaKnown RBP3.77□□□□□ -1.81
VPS41-205ENST00000414632 RNF5Q99942 180 aa3.77□□□□□ -1.81
VPS41-205ENST00000414632 BCL7BQ9BQE9 202 aa3.77□□□□□ -1.81
VPS41-205ENST00000414632 GON7Q9BXV9 100 aa3.77□□□□□ -1.81
VPS41-205ENST00000414632 SLIRPQ9GZT3 109 aaKnown RBP3.77□□□□□ -1.81
VPS41-205ENST00000414632 ZNF430Q9H8G1 570 aaPredicted RBP3.77□□□□□ -1.81
VPS41-205ENST00000414632 DNAJC4Q9NNZ3 241 aa3.77□□□□□ -1.81
VPS41-205ENST00000414632 RSL24D1Q9UHA3 163 aaKnown RBP3.77□□□□□ -1.81
VPS41-205ENST00000414632 FOXA2Q9Y261 457 aaPredicted RBP3.77□□□□□ -1.81
VPS41-205ENST00000414632 PRELID3BQ9Y3B1 194 aa3.77□□□□□ -1.81
VPS41-205ENST00000414632 MSGN1A6NI15 193 aa3.76□□□□□ -1.81
VPS41-205ENST00000414632 E7EUB6 86 aa3.76□□□□□ -1.81
VPS41-205ENST00000414632 GABARAPH6UMI1 98 aa3.76□□□□□ -1.81
VPS41-205ENST00000414632 GPR31O00270 319 aa3.76□□□□□ -1.81
VPS41-205ENST00000414632 OR2A4O95047 310 aa3.76□□□□□ -1.81
VPS41-205ENST00000414632 RAB3DO95716 219 aa3.76□□□□□ -1.81
VPS41-205ENST00000414632 TRGV3P03979 118 aa3.76□□□□□ -1.81
VPS41-205ENST00000414632 IFNA6P05013 189 aa3.76□□□□□ -1.81
VPS41-205ENST00000414632 REG1AP05451 166 aa3.76□□□□□ -1.81
VPS41-205ENST00000414632 SPP1P10451 314 aa3.76□□□□□ -1.81
VPS41-205ENST00000414632 PGAM2P15259 253 aa3.76□□□□□ -1.81
VPS41-205ENST00000414632 LPAR6P43657 344 aa3.76□□□□□ -1.81
VPS41-205ENST00000414632 LGALS7P47929 136 aa3.76□□□□□ -1.81
VPS41-205ENST00000414632 RAB9AP51151 201 aa3.76□□□□□ -1.81
VPS41-205ENST00000414632 TMEM267Q0VDI3 215 aaPredicted RBP3.76□□□□□ -1.81
VPS41-205ENST00000414632 CATR1Q13166 79 aa3.76□□□□□ -1.81
VPS41-205ENST00000414632 KIAA0141Q14154 515 aaPredicted RBP3.76□□□□□ -1.81
VPS41-205ENST00000414632 PRSS8Q16651 343 aa3.76□□□□□ -1.81
VPS41-205ENST00000414632 KRTAP15-1Q3LI76 137 aa3.76□□□□□ -1.81
VPS41-205ENST00000414632 RNASE10Q5GAN6 216 aaKnown RBP3.76□□□□□ -1.81
VPS41-205ENST00000414632 OR4A47Q6IF82 309 aa3.76□□□□□ -1.81
VPS41-205ENST00000414632 DHRS11Q6UWP2 260 aa3.76□□□□□ -1.81
VPS41-205ENST00000414632 ZNF562Q6V9R5 426 aa3.76□□□□□ -1.81
VPS41-205ENST00000414632 COMMD1Q8N668 190 aa3.76□□□□□ -1.81
VPS41-205ENST00000414632 ZNF491Q8N8L2 437 aa3.76□□□□□ -1.81
VPS41-205ENST00000414632 NRACQ8N912 160 aa3.76□□□□□ -1.81
VPS41-205ENST00000414632 MINDY2Q8NBR6 621 aa3.76□□□□□ -1.81
VPS41-205ENST00000414632 DMBX1Q8NFW5 382 aa3.76□□□□□ -1.81
VPS41-205ENST00000414632 OR11H1Q8NG94 326 aa3.76□□□□□ -1.81
VPS41-205ENST00000414632 SRSF12Q8WXF0 261 aaKnown RBP3.76□□□□□ -1.81
VPS41-205ENST00000414632 OR2A7Q96R45 310 aa3.76□□□□□ -1.81
VPS41-205ENST00000414632 NXF2Q9GZY0 626 aaKnown RBP3.76□□□□□ -1.81
VPS41-205ENST00000414632 HRASLSQ9HDD0 168 aa3.76□□□□□ -1.81
VPS41-205ENST00000414632 ZFP57Q9NU63 452 aa3.76□□□□□ -1.81
VPS41-205ENST00000414632 COA4Q9NYJ1 87 aa3.76□□□□□ -1.81
VPS41-205ENST00000414632 C11orf21Q9P2W6 132 aa3.76□□□□□ -1.81
VPS41-205ENST00000414632 MTFP1Q9UDX5 166 aa3.76□□□□□ -1.81
VPS41-205ENST00000414632 NUBP2Q9Y5Y2 271 aa3.76□□□□□ -1.81
VPS41-205ENST00000414632 NOTCH3Q9UM47 2321 aa3.75□□□□□ -1.81
VPS41-205ENST00000414632 IGHV4OR15-8A0A075B7B6 117 aa3.75□□□□□ -1.81
VPS41-205ENST00000414632 A0A087WW49 117 aa3.75□□□□□ -1.81
VPS41-205ENST00000414632 IGLV5-52A0A0A0MRZ9 124 aa3.75□□□□□ -1.81
VPS41-205ENST00000414632 TEX13DA0A0J9YY54 714 aaPredicted RBP3.75□□□□□ -1.81
VPS41-205ENST00000414632 A0A1B0GW64 132 aa3.75□□□□□ -1.81
VPS41-205ENST00000414632 FABP12A6NFH5 140 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms