RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 PGLYRP1O75594 196 aaPredicted RBP9.54□□□□□ -0.88
PRPF40A-202ENST00000410080 C8orf88P0DMB2 117 aa9.54□□□□□ -0.88
PRPF40A-202ENST00000410080 HOXA5P20719 270 aa9.54□□□□□ -0.88
PRPF40A-202ENST00000410080 FGF9P31371 208 aaPredicted RBP9.54□□□□□ -0.88
PRPF40A-202ENST00000410080 PKIAP61925 76 aa9.54□□□□□ -0.88
PRPF40A-202ENST00000410080 OR11H4Q8NGC9 324 aa9.54□□□□□ -0.88
PRPF40A-202ENST00000410080 EFEMP2O95967 443 aa9.54□□□□□ -0.88
PRPF40A-202ENST00000410080 CYP2G1PQ6ZSU1 146 aa9.54□□□□□ -0.88
PRPF40A-202ENST00000410080 MRPL20Q9BYC9 149 aaKnown RBP9.54□□□□□ -0.88
PRPF40A-202ENST00000410080 CEACAM8P31997 349 aaPredicted RBP9.53□□□□□ -0.88
PRPF40A-202ENST00000410080 TIMM23BQ5SRD1 257 aa9.53□□□□□ -0.88
PRPF40A-202ENST00000410080 DMKNQ6E0U4 476 aaPredicted RBP9.53□□□□□ -0.88
PRPF40A-202ENST00000410080 TEX45Q8NA69 505 aa9.53□□□□□ -0.88
PRPF40A-202ENST00000410080 TNFSF18Q9UNG2 199 aa9.53□□□□□ -0.88
PRPF40A-202ENST00000410080 BCL2P10415 239 aa9.53□□□□□ -0.88
PRPF40A-202ENST00000410080 DPM3Q9P2X0 92 aa9.53□□□□□ -0.88
PRPF40A-202ENST00000410080 LOC102723996A0A087X1L8 192 aa9.53□□□□□ -0.88
PRPF40A-202ENST00000410080 HLA-DRB1P01911 266 aa9.53□□□□□ -0.88
PRPF40A-202ENST00000410080 IL6RP08887 468 aaPredicted RBP9.53□□□□□ -0.88
PRPF40A-202ENST00000410080 IGKV1-8A0A0C4DH67 115 aa9.53□□□□□ -0.88
PRPF40A-202ENST00000410080 TYMSP04818 313 aa9.53□□□□□ -0.88
PRPF40A-202ENST00000410080 ZNF414Q96IQ9 312 aa9.53□□□□□ -0.88
PRPF40A-202ENST00000410080 MSGN1A6NI15 193 aa9.53□□□□□ -0.88
PRPF40A-202ENST00000410080 KLK2P20151 261 aa9.53□□□□□ -0.88
PRPF40A-202ENST00000410080 HOGA1Q86XE5 327 aa9.53□□□□□ -0.88
PRPF40A-202ENST00000410080 TMEM219Q86XT9 240 aa9.53□□□□□ -0.88
PRPF40A-202ENST00000410080 ZNF729A6NN14 1252 aaPredicted RBP9.53□□□□□ -0.88
PRPF40A-202ENST00000410080 INS-IGF2F8WCM5 200 aa9.53□□□□□ -0.88
PRPF40A-202ENST00000410080 VENTXO95231 258 aa9.53□□□□□ -0.88
PRPF40A-202ENST00000410080 INSP01308 110 aa9.53□□□□□ -0.88
PRPF40A-202ENST00000410080 HOXD3P31249 432 aaPredicted RBP9.53□□□□□ -0.88
PRPF40A-202ENST00000410080 PRADC1Q9BSG0 188 aa9.53□□□□□ -0.88
PRPF40A-202ENST00000410080 STAG3L3P0CL85 134 aa9.52□□□□□ -0.88
PRPF40A-202ENST00000410080 PAX1P15863 534 aa9.52□□□□□ -0.88
PRPF40A-202ENST00000410080 UBE2V2Q15819 145 aa9.52□□□□□ -0.88
PRPF40A-202ENST00000410080 ZXDCQ2QGD7 858 aaPredicted RBP9.52□□□□□ -0.88
PRPF40A-202ENST00000410080 A0A1W2PP11 408 aa9.52□□□□□ -0.88
PRPF40A-202ENST00000410080 LEPP41159 167 aa9.52□□□□□ -0.88
PRPF40A-202ENST00000410080 SUMO4Q6EEV6 95 aa9.52□□□□□ -0.88
PRPF40A-202ENST00000410080 Q6ZT83 130 aa9.52□□□□□ -0.88
PRPF40A-202ENST00000410080 VCX2Q9H322 139 aa9.52□□□□□ -0.88
PRPF40A-202ENST00000410080 MMP16P51512 607 aa9.52□□□□□ -0.89
PRPF40A-202ENST00000410080 CRYBA2P53672 197 aa9.52□□□□□ -0.89
PRPF40A-202ENST00000410080 LINC00158P58513 81 aa9.52□□□□□ -0.89
PRPF40A-202ENST00000410080 SERF2P84101 59 aa9.52□□□□□ -0.89
PRPF40A-202ENST00000410080 PKDREJQ9NTG1 2253 aa9.52□□□□□ -0.89
PRPF40A-202ENST00000410080 A0A087WX48 190 aa9.52□□□□□ -0.89
PRPF40A-202ENST00000410080 EVI2AP22794 236 aa9.52□□□□□ -0.89
PRPF40A-202ENST00000410080 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.52□□□□□ -0.89
PRPF40A-202ENST00000410080 SEPSECSQ9HD40 501 aaKnown RBP9.52□□□□□ -0.89
PRPF40A-202ENST00000410080 OR5AC2Q9NZP5 309 aa9.52□□□□□ -0.89
PRPF40A-202ENST00000410080 CTDSPLO15194 276 aa9.52□□□□□ -0.89
PRPF40A-202ENST00000410080 HSPE1P61604 102 aaKnown RBP9.52□□□□□ -0.89
PRPF40A-202ENST00000410080 RNASE6Q93091 150 aaKnown RBP9.52□□□□□ -0.89
PRPF40A-202ENST00000410080 C7orf77A4D0Y5 90 aa9.52□□□□□ -0.89
PRPF40A-202ENST00000410080 CENPWQ5EE01 88 aa9.52□□□□□ -0.89
PRPF40A-202ENST00000410080 CBLN4Q9NTU7 201 aa9.52□□□□□ -0.89
PRPF40A-202ENST00000410080 SNAI2O43623 268 aa9.52□□□□□ -0.89
PRPF40A-202ENST00000410080 TIAF1O95411 115 aa9.52□□□□□ -0.89
PRPF40A-202ENST00000410080 SOD3P08294 240 aa9.52□□□□□ -0.89
PRPF40A-202ENST00000410080 PAX2Q02962 417 aa9.52□□□□□ -0.89
PRPF40A-202ENST00000410080 SFTA2Q6UW10 78 aa9.52□□□□□ -0.89
PRPF40A-202ENST00000410080 TAF15Q92804 592 aaKnown RBP eCLIP9.52□□□□□ -0.898e-10■□□□□ 10.2
PRPF40A-202ENST00000410080 C19orf67A6NJJ6 358 aa9.51□□□□□ -0.89
PRPF40A-202ENST00000410080 HS3ST3B1Q9Y662 390 aa9.51□□□□□ -0.89
PRPF40A-202ENST00000410080 MED13Q9UHV7 2174 aa9.51□□□□□ -0.89
PRPF40A-202ENST00000410080 SELENOHQ8IZQ5 122 aaKnown RBP9.51□□□□□ -0.89
PRPF40A-202ENST00000410080 GATD1Q8NB37 220 aa9.51□□□□□ -0.89
PRPF40A-202ENST00000410080 OR2K2Q8NGT1 345 aa9.51□□□□□ -0.89
PRPF40A-202ENST00000410080 FAM57AQ8TBR7 257 aa9.51□□□□□ -0.89
PRPF40A-202ENST00000410080 WNK1Q9H4A3 2382 aa9.51□□□□□ -0.89
PRPF40A-202ENST00000410080 PLXNB3Q9ULL4 1909 aa9.51□□□□□ -0.89
PRPF40A-202ENST00000410080 IGKV1D-42A0A075B6H8 117 aa9.51□□□□□ -0.89
PRPF40A-202ENST00000410080 MEF2CQ06413 473 aaPredicted RBP9.51□□□□□ -0.89
PRPF40A-202ENST00000410080 OR11H7Q8NGC8 314 aa9.51□□□□□ -0.89
PRPF40A-202ENST00000410080 WFIKKN1Q96NZ8 548 aa9.51□□□□□ -0.89
PRPF40A-202ENST00000410080 TNS1Q9HBL0 1735 aaKnown RBP9.51□□□□□ -0.89
PRPF40A-202ENST00000410080 NPIPB8E9PQR5 432 aa9.51□□□□□ -0.89
PRPF40A-202ENST00000410080 NPIPB9F8W1W9 429 aa9.51□□□□□ -0.89
PRPF40A-202ENST00000410080 NPIPB7O75200 414 aa9.51□□□□□ -0.89
PRPF40A-202ENST00000410080 MED13LQ71F56 2210 aa9.51□□□□□ -0.89
PRPF40A-202ENST00000410080 RTN4RL2Q86UN3 420 aa9.51□□□□□ -0.89
PRPF40A-202ENST00000410080 C21orf62Q9NYP8 219 aa9.51□□□□□ -0.89
PRPF40A-202ENST00000410080 ADAMTS7Q9UKP4 1686 aa9.51□□□□□ -0.89
PRPF40A-202ENST00000410080 IGHV3-53P01767 116 aa9.51□□□□□ -0.89
PRPF40A-202ENST00000410080 LINC00527Q9UJ94 153 aa9.51□□□□□ -0.89
PRPF40A-202ENST00000410080 JPT1Q9UK76 154 aa9.51□□□□□ -0.89
PRPF40A-202ENST00000410080 TRAV14DV4A0A0A6YYC5 116 aa9.5□□□□□ -0.89
PRPF40A-202ENST00000410080 CELA3AP09093 270 aa9.5□□□□□ -0.89
PRPF40A-202ENST00000410080 FAM181AQ8N9Y4 354 aa9.5□□□□□ -0.89
PRPF40A-202ENST00000410080 RARRES2Q99969 163 aa9.5□□□□□ -0.89
PRPF40A-202ENST00000410080 PRR14LQ5THK1 2151 aa9.5□□□□□ -0.89
PRPF40A-202ENST00000410080 HMGA2P52926 109 aa9.5□□□□□ -0.89
PRPF40A-202ENST00000410080 NABP2Q9BQ15 211 aa9.5□□□□□ -0.89
PRPF40A-202ENST00000410080 HLA-DQA1P01909 254 aa9.5□□□□□ -0.89
PRPF40A-202ENST00000410080 ACP7Q6ZNF0 438 aa9.5□□□□□ -0.89
PRPF40A-202ENST00000410080 RNF182Q8N6D2 247 aa9.5□□□□□ -0.89
PRPF40A-202ENST00000410080 MRAPQ8TCY5 172 aa9.5□□□□□ -0.89
PRPF40A-202ENST00000410080 TMEM54Q969K7 222 aa9.5□□□□□ -0.89
PRPF40A-202ENST00000410080 MARVELD1Q9BSK0 173 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms