RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 HIPK2Q9H2X6 1198 aa11.89□□□□□ -0.51
LSM5-207ENST00000410044 ENY2Q9NPA8 101 aa11.89□□□□□ -0.51
LSM5-207ENST00000410044 NXPH3O95157 252 aa11.88□□□□□ -0.51
LSM5-207ENST00000410044 APELAP0DMC3 54 aa11.88□□□□□ -0.51
LSM5-207ENST00000410044 HOXA1P49639 335 aaPredicted RBP11.88□□□□□ -0.51
LSM5-207ENST00000410044 TAS2R30P59541 319 aa11.88□□□□□ -0.51
LSM5-207ENST00000410044 POLR2GP62487 172 aaKnown RBP eCLIP11.88□□□□□ -0.51
LSM5-207ENST00000410044 KRTAP21-3Q3LHN1 58 aa11.88□□□□□ -0.51
LSM5-207ENST00000410044 SPINK9Q5DT21 86 aa11.88□□□□□ -0.51
LSM5-207ENST00000410044 C10orf99Q6UWK7 81 aa11.88□□□□□ -0.51
LSM5-207ENST00000410044 OR1P1Q8NH06 330 aa11.88□□□□□ -0.51
LSM5-207ENST00000410044 MYOZ3Q8TDC0 251 aa11.88□□□□□ -0.51
LSM5-207ENST00000410044 CHAC2Q8WUX2 184 aa11.88□□□□□ -0.51
LSM5-207ENST00000410044 WFDC12Q8WWY7 111 aa11.88□□□□□ -0.51
LSM5-207ENST00000410044 SMIM8Q96KF7 97 aa11.88□□□□□ -0.51
LSM5-207ENST00000410044 FANCD2OSQ96PS1 177 aa11.88□□□□□ -0.51
LSM5-207ENST00000410044 RAB40CQ96S21 281 aa11.88□□□□□ -0.51
LSM5-207ENST00000410044 P2RX4Q99571 388 aa11.88□□□□□ -0.51
LSM5-207ENST00000410044 C11orf1Q9H5F2 150 aa11.88□□□□□ -0.51
LSM5-207ENST00000410044 SLA2Q9H6Q3 261 aa11.88□□□□□ -0.51
LSM5-207ENST00000410044 HEYLQ9NQ87 328 aaPredicted RBP11.88□□□□□ -0.51
LSM5-207ENST00000410044 F11RQ9Y624 299 aaKnown RBP11.88□□□□□ -0.51
LSM5-207ENST00000410044 U3KQ87 197 aa11.88□□□□□ -0.51
LSM5-207ENST00000410044 FBN1P35555 2871 aaKnown RBP11.87□□□□□ -0.51
LSM5-207ENST00000410044 K7EPK0 472 aa11.87□□□□□ -0.51
LSM5-207ENST00000410044 RNASE2P10153 161 aaKnown RBP11.87□□□□□ -0.51
LSM5-207ENST00000410044 HIST1H1BP16401 226 aaKnown RBP11.87□□□□□ -0.51
LSM5-207ENST00000410044 SNCAP37840 140 aa11.87□□□□□ -0.51
LSM5-207ENST00000410044 HTR2BP41595 481 aa11.87□□□□□ -0.51
LSM5-207ENST00000410044 RAB9AP51151 201 aa11.87□□□□□ -0.51
LSM5-207ENST00000410044 SUB1P53999 127 aaKnown RBP eCLIP11.87□□□□□ -0.512e-7■■■■□ 24.9
LSM5-207ENST00000410044 PAX9P55771 341 aa11.87□□□□□ -0.51
LSM5-207ENST00000410044 CD83Q01151 205 aa11.87□□□□□ -0.51
LSM5-207ENST00000410044 KIAA0141Q14154 515 aaPredicted RBP11.87□□□□□ -0.51
LSM5-207ENST00000410044 C2orf83Q53S99 150 aa11.87□□□□□ -0.51
LSM5-207ENST00000410044 TCTEX1D4Q5JR98 221 aa11.87□□□□□ -0.51
LSM5-207ENST00000410044 WDR89Q96FK6 387 aaPredicted RBP11.87□□□□□ -0.51
LSM5-207ENST00000410044 ZNF436Q9C0F3 470 aaPredicted RBP11.87□□□□□ -0.51
LSM5-207ENST00000410044 MAGT1Q9H0U3 335 aa11.87□□□□□ -0.51
LSM5-207ENST00000410044 IGLV11-55A0A075B6I3 123 aa11.86□□□□□ -0.51
LSM5-207ENST00000410044 HAX1O00165 279 aa11.86□□□□□ -0.51
LSM5-207ENST00000410044 WRBO00258 174 aa11.86□□□□□ -0.51
LSM5-207ENST00000410044 REG1AP05451 166 aa11.86□□□□□ -0.51
LSM5-207ENST00000410044 GIPP09681 153 aaPredicted RBP11.86□□□□□ -0.51
LSM5-207ENST00000410044 MFAP2P55001 183 aa11.86□□□□□ -0.51
LSM5-207ENST00000410044 KRTAP10-3P60369 221 aa11.86□□□□□ -0.51
LSM5-207ENST00000410044 RAB32Q13637 225 aa11.86□□□□□ -0.51
LSM5-207ENST00000410044 NOXA1Q86UR1 476 aa11.86□□□□□ -0.51
LSM5-207ENST00000410044 OR4X2Q8NGF9 303 aa11.86□□□□□ -0.51
LSM5-207ENST00000410044 KLK15Q9H2R5 256 aa11.86□□□□□ -0.51
LSM5-207ENST00000410044 RCL1Q9Y2P8 373 aaKnown RBP11.86□□□□□ -0.51
LSM5-207ENST00000410044 DMRT1Q9Y5R6 373 aa11.86□□□□□ -0.51
LSM5-207ENST00000410044 CYB5BO43169 146 aa11.85□□□□□ -0.51
LSM5-207ENST00000410044 TMEM50AO95807 157 aa11.85□□□□□ -0.51
LSM5-207ENST00000410044 SCGB1D2O95969 90 aa11.85□□□□□ -0.51
LSM5-207ENST00000410044 DEFA4P12838 97 aa11.85□□□□□ -0.51
LSM5-207ENST00000410044 RPP30P78346 268 aaKnown RBP11.85□□□□□ -0.51
LSM5-207ENST00000410044 TMEM65Q6PI78 240 aa11.85□□□□□ -0.51
LSM5-207ENST00000410044 SLC24A4Q8NFF2 622 aa11.85□□□□□ -0.51
LSM5-207ENST00000410044 TMEM170AQ8WVE7 144 aa11.85□□□□□ -0.51
LSM5-207ENST00000410044 PPP1R1CQ8WVI7 109 aa11.85□□□□□ -0.51
LSM5-207ENST00000410044 USMG5Q96IX5 58 aa11.85□□□□□ -0.51
LSM5-207ENST00000410044 ATRQ13535 2644 aa11.85□□□□□ -0.51
LSM5-207ENST00000410044 FAM223BA6NKX1 122 aa11.84□□□□□ -0.51
LSM5-207ENST00000410044 TSC22D2O75157 780 aa11.84□□□□□ -0.51
LSM5-207ENST00000410044 DEDDO75618 318 aa11.84□□□□□ -0.51
LSM5-207ENST00000410044 MPC2O95563 127 aa11.84□□□□□ -0.51
LSM5-207ENST00000410044 TRGV3P03979 118 aa11.84□□□□□ -0.51
LSM5-207ENST00000410044 RLN2P04090 185 aa11.84□□□□□ -0.51
LSM5-207ENST00000410044 PF4V1P10720 104 aa11.84□□□□□ -0.51
LSM5-207ENST00000410044 IAPPP10997 89 aa11.84□□□□□ -0.51
LSM5-207ENST00000410044 CDX1P47902 265 aaPredicted RBP11.84□□□□□ -0.51
LSM5-207ENST00000410044 RAP2BP61225 183 aa11.84□□□□□ -0.51
LSM5-207ENST00000410044 SLC25A24Q6NUK1 477 aa11.84□□□□□ -0.51
LSM5-207ENST00000410044 FAM223AQ8IWN6 122 aa11.84□□□□□ -0.51
LSM5-207ENST00000410044 ZNF491Q8N8L2 437 aa11.84□□□□□ -0.51
LSM5-207ENST00000410044 NECAP1Q8NC96 275 aa11.84□□□□□ -0.51
LSM5-207ENST00000410044 CITED1Q99966 193 aa11.84□□□□□ -0.51
LSM5-207ENST00000410044 RNF126Q9BV68 326 aa11.84□□□□□ -0.51
LSM5-207ENST00000410044 ZNF747Q9BV97 191 aa11.84□□□□□ -0.51
LSM5-207ENST00000410044 ZNF355PQ9NSJ1 428 aa11.84□□□□□ -0.51
LSM5-207ENST00000410044 PSENENQ9NZ42 101 aa11.84□□□□□ -0.51
LSM5-207ENST00000410044 THYN1Q9P016 225 aa11.84□□□□□ -0.51
LSM5-207ENST00000410044 LSM5Q9Y4Y9 91 aaKnown RBP11.84□□□□□ -0.51
LSM5-207ENST00000410044 A0A0G2JLM5 398 aa11.83□□□□□ -0.52
LSM5-207ENST00000410044 C15orf62A8K5M9 175 aa11.83□□□□□ -0.52
LSM5-207ENST00000410044 H0YIZ8 118 aa11.83□□□□□ -0.52
LSM5-207ENST00000410044 CORTO00230 105 aa11.83□□□□□ -0.52
LSM5-207ENST00000410044 SSSCA1O60232 199 aa11.83□□□□□ -0.52
LSM5-207ENST00000410044 IFNA10P01566 189 aa11.83□□□□□ -0.52
LSM5-207ENST00000410044 PRH1P02810 166 aa11.83□□□□□ -0.52
LSM5-207ENST00000410044 RPLP1P05386 114 aaKnown RBP11.83□□□□□ -0.52
LSM5-207ENST00000410044 CD28P10747 220 aa11.83□□□□□ -0.52
LSM5-207ENST00000410044 LYL1P12980 280 aa11.83□□□□□ -0.52
LSM5-207ENST00000410044 PVALBP20472 110 aaPredicted RBP11.83□□□□□ -0.52
LSM5-207ENST00000410044 NPY1RP25929 384 aa11.83□□□□□ -0.52
LSM5-207ENST00000410044 C11orf87Q6NUJ2 197 aa11.83□□□□□ -0.52
LSM5-207ENST00000410044 C19orf35Q6ZS72 473 aa11.83□□□□□ -0.52
LSM5-207ENST00000410044 UBE2E2Q96LR5 201 aa11.83□□□□□ -0.52
LSM5-207ENST00000410044 MS4A10Q96PG2 267 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms