RNA–Protein interactions for RNA: ENST00000409889.1

CCDC148-203, Transcript of coiled-coil domain containing 148, humanhuman

TSL 1 (best) BASIC

Gene CCDC148, Length 1,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148-203ENST00000409889 TRAV3A0A0B4J244 114 aa7.45□□□□□ -1.22
CCDC148-203ENST00000409889 TMEM189A5PLL7 270 aa7.45□□□□□ -1.22
CCDC148-203ENST00000409889 SLC22A5O76082 557 aa7.45□□□□□ -1.22
CCDC148-203ENST00000409889 APOHP02749 345 aaPredicted RBP7.45□□□□□ -1.22
CCDC148-203ENST00000409889 CD1AP06126 327 aa7.45□□□□□ -1.22
CCDC148-203ENST00000409889 ZNF688P0C7X2 276 aa7.45□□□□□ -1.22
CCDC148-203ENST00000409889 EIF4EBP1Q13541 118 aaPredicted RBP7.45□□□□□ -1.22
CCDC148-203ENST00000409889 ZNF773Q6PK81 442 aa7.45□□□□□ -1.22
CCDC148-203ENST00000409889 TMEM80Q96HE8 168 aa7.45□□□□□ -1.22
CCDC148-203ENST00000409889 GPHA2Q96T91 129 aa7.45□□□□□ -1.22
CCDC148-203ENST00000409889 GINS3Q9BRX5 216 aa7.45□□□□□ -1.22
CCDC148-203ENST00000409889 NIPSNAP3BQ9BS92 247 aa7.45□□□□□ -1.22
CCDC148-203ENST00000409889 C1QTNF4Q9BXJ3 329 aa7.45□□□□□ -1.22
CCDC148-203ENST00000409889 VSIRQ9H7M9 311 aa7.45□□□□□ -1.22
CCDC148-203ENST00000409889 PLGRKTQ9HBL7 147 aa7.45□□□□□ -1.22
CCDC148-203ENST00000409889 TAS2R8Q9NYW2 309 aa7.45□□□□□ -1.22
CCDC148-203ENST00000409889 OR2W1Q9Y3N9 320 aa7.45□□□□□ -1.22
CCDC148-203ENST00000409889 F11RQ9Y624 299 aaKnown RBP7.45□□□□□ -1.22
CCDC148-203ENST00000409889 IGKV1D-8A0A087WSZ0 117 aa7.44□□□□□ -1.22
CCDC148-203ENST00000409889 IGKV1D-13A0A0B4J2D9 117 aa7.44□□□□□ -1.22
CCDC148-203ENST00000409889 TEX48A0A1B0GUV7 120 aa7.44□□□□□ -1.22
CCDC148-203ENST00000409889 HLA-DQB1P01920 261 aa7.44□□□□□ -1.22
CCDC148-203ENST00000409889 GNAO1P09471 354 aa7.44□□□□□ -1.22
CCDC148-203ENST00000409889 IGKV1-13P0DP09 117 aa7.44□□□□□ -1.22
CCDC148-203ENST00000409889 NFYAP23511 347 aaPredicted RBP7.44□□□□□ -1.22
CCDC148-203ENST00000409889 XGP55808 180 aa7.44□□□□□ -1.22
CCDC148-203ENST00000409889 ACSM3Q53FZ2 586 aa7.44□□□□□ -1.22
CCDC148-203ENST00000409889 FAM222AQ5U5X8 452 aa7.44□□□□□ -1.22
CCDC148-203ENST00000409889 THOC7Q6I9Y2 204 aaKnown RBP7.44□□□□□ -1.22
CCDC148-203ENST00000409889 LAIR2Q6ISS4 152 aa7.44□□□□□ -1.22
CCDC148-203ENST00000409889 C15orf53Q8NAA6 179 aa7.44□□□□□ -1.22
CCDC148-203ENST00000409889 ZNF555Q8NEP9 628 aa7.44□□□□□ -1.22
CCDC148-203ENST00000409889 STXBP6Q8NFX7 210 aa7.44□□□□□ -1.22
CCDC148-203ENST00000409889 RAB3CQ96E17 227 aa7.44□□□□□ -1.22
CCDC148-203ENST00000409889 GRAMD2BQ96HH9 432 aa7.44□□□□□ -1.22
CCDC148-203ENST00000409889 AIFM2Q9BRQ8 373 aa7.44□□□□□ -1.22
CCDC148-203ENST00000409889 CENPOQ9BU64 300 aa7.44□□□□□ -1.22
CCDC148-203ENST00000409889 NXF2Q9GZY0 626 aaKnown RBP7.44□□□□□ -1.22
CCDC148-203ENST00000409889 XCL2Q9UBD3 114 aa7.44□□□□□ -1.22
CCDC148-203ENST00000409889 DKK2Q9UBU2 259 aa7.44□□□□□ -1.22
CCDC148-203ENST00000409889 A0A075B6Q4 140 aa7.43□□□□□ -1.22
CCDC148-203ENST00000409889 K7EQG2 157 aa7.43□□□□□ -1.22
CCDC148-203ENST00000409889 UPK2O00526 184 aa7.43□□□□□ -1.22
CCDC148-203ENST00000409889 SLC17A2O00624 439 aa7.43□□□□□ -1.22
CCDC148-203ENST00000409889 TRAPPC2P0DI81 140 aa7.43□□□□□ -1.22
CCDC148-203ENST00000409889 TRAPPC2BP0DI82 140 aa7.43□□□□□ -1.22
CCDC148-203ENST00000409889 CD37P11049 281 aa7.43□□□□□ -1.22
CCDC148-203ENST00000409889 GNB3P16520 340 aa7.43□□□□□ -1.22
CCDC148-203ENST00000409889 ST3GAL4Q11206 333 aa7.43□□□□□ -1.22
CCDC148-203ENST00000409889 HSD17B12Q53GQ0 312 aa7.43□□□□□ -1.22
CCDC148-203ENST00000409889 HSD17B13Q7Z5P4 300 aaPredicted RBP7.43□□□□□ -1.22
CCDC148-203ENST00000409889 NEU1Q99519 415 aa7.43□□□□□ -1.22
CCDC148-203ENST00000409889 MFNGO00587 321 aa7.42□□□□□ -1.22
CCDC148-203ENST00000409889 TNFSF12O43508 249 aa7.42□□□□□ -1.22
CCDC148-203ENST00000409889 DENRO43583 198 aaKnown RBP7.42□□□□□ -1.22
CCDC148-203ENST00000409889 FGF2P09038 288 aa7.42□□□□□ -1.22
CCDC148-203ENST00000409889 BTF3P20290 206 aaKnown RBP7.42□□□□□ -1.22
CCDC148-203ENST00000409889 FGF9P31371 208 aaPredicted RBP7.42□□□□□ -1.22
CCDC148-203ENST00000409889 CLDN12P56749 244 aa7.42□□□□□ -1.22
CCDC148-203ENST00000409889 TAS2R31P59538 309 aa7.42□□□□□ -1.22
CCDC148-203ENST00000409889 NUTF2P61970 127 aaKnown RBP7.42□□□□□ -1.22
CCDC148-203ENST00000409889 OXA1LQ15070 435 aa7.42□□□□□ -1.22
CCDC148-203ENST00000409889 RAB11BQ15907 218 aa7.42□□□□□ -1.22
CCDC148-203ENST00000409889 TOMM20LQ6UXN7 152 aa7.42□□□□□ -1.22
CCDC148-203ENST00000409889 ZNF705AQ6ZN79 300 aaPredicted RBP7.42□□□□□ -1.22
CCDC148-203ENST00000409889 Q6ZS49 121 aa7.42□□□□□ -1.22
CCDC148-203ENST00000409889 SPAG16Q8N0X2 631 aa7.42□□□□□ -1.22
CCDC148-203ENST00000409889 LSM10Q969L4 123 aaKnown RBP7.42□□□□□ -1.22
CCDC148-203ENST00000409889 GFI1Q99684 422 aa7.42□□□□□ -1.22
CCDC148-203ENST00000409889 TMEM231Q9H6L2 316 aa7.42□□□□□ -1.22
CCDC148-203ENST00000409889 TMEM140Q9NV12 185 aa7.42□□□□□ -1.22
CCDC148-203ENST00000409889 MDFICQ9P1T7 246 aa7.42□□□□□ -1.22
CCDC148-203ENST00000409889 IGHV3OR16-12A0A075B7B8 117 aa7.41□□□□□ -1.22
CCDC148-203ENST00000409889 TEX50A0A1B0GTY4 177 aa7.41□□□□□ -1.22
CCDC148-203ENST00000409889 EFCAB10A6NFE3 127 aa7.41□□□□□ -1.22
CCDC148-203ENST00000409889 ZNF705FA8MVS1 300 aaPredicted RBP7.41□□□□□ -1.22
CCDC148-203ENST00000409889 MYL12BO14950 172 aa7.41□□□□□ -1.22
CCDC148-203ENST00000409889 ZNF705DP0CH99 300 aaPredicted RBP7.41□□□□□ -1.22
CCDC148-203ENST00000409889 ZNF705BP0CI00 300 aaPredicted RBP7.41□□□□□ -1.22
CCDC148-203ENST00000409889 NQO2P16083 231 aa7.41□□□□□ -1.22
CCDC148-203ENST00000409889 TALDO1P37837 337 aa7.41□□□□□ -1.22
CCDC148-203ENST00000409889 MFAP4P55083 255 aa7.41□□□□□ -1.22
CCDC148-203ENST00000409889 WNT4P56705 351 aa7.41□□□□□ -1.22
CCDC148-203ENST00000409889 RCN1Q15293 331 aa7.41□□□□□ -1.22
CCDC148-203ENST00000409889 POU2AF1Q16633 256 aa7.41□□□□□ -1.22
CCDC148-203ENST00000409889 AHSA2Q719I0 299 aa7.41□□□□□ -1.22
CCDC148-203ENST00000409889 MS4A15Q8N5U1 240 aa7.41□□□□□ -1.22
CCDC148-203ENST00000409889 DMBX1Q8NFW5 382 aa7.41□□□□□ -1.22
CCDC148-203ENST00000409889 DCANP1Q8TF63 244 aa7.41□□□□□ -1.22
CCDC148-203ENST00000409889 SLC25A46Q96AG3 418 aa7.41□□□□□ -1.22
CCDC148-203ENST00000409889 RAB40CQ96S21 281 aa7.41□□□□□ -1.22
CCDC148-203ENST00000409889 HINT2Q9BX68 163 aa7.41□□□□□ -1.22
CCDC148-203ENST00000409889 PTTG2Q9NZH5 202 aa7.41□□□□□ -1.22
CCDC148-203ENST00000409889 RFNGQ9Y644 331 aa7.41□□□□□ -1.22
CCDC148-203ENST00000409889 RNF213Q63HN8 5207 aa7.4□□□□□ -1.22
CCDC148-203ENST00000409889 TMEM272A0A1B0GTI8 110 aa7.4□□□□□ -1.22
CCDC148-203ENST00000409889 SMIM9A6NGZ8 99 aa7.4□□□□□ -1.22
CCDC148-203ENST00000409889 RBFOX2O43251 390 aaKnown RBP eCLIP7.4□□□□□ -1.22
CCDC148-203ENST00000409889 GNG7O60262 68 aa7.4□□□□□ -1.22
CCDC148-203ENST00000409889 SMR3BP02814 79 aaPredicted RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms