RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 COL4A5P29400 1685 aa0.25□□□□□ -2.37
PMS1-203ENST00000409593 CLDN25C9JDP6 229 aa0.24□□□□□ -2.37
PMS1-203ENST00000409593 ASAH2BP0C7U1 165 aa0.24□□□□□ -2.37
PMS1-203ENST00000409593 FAM228BP0C875 321 aa0.24□□□□□ -2.37
PMS1-203ENST00000409593 MAP2K4P45985 399 aa0.24□□□□□ -2.37
PMS1-203ENST00000409593 CAV1Q03135 178 aa0.24□□□□□ -2.37
PMS1-203ENST00000409593 STX5Q13190 355 aa0.24□□□□□ -2.37
PMS1-203ENST00000409593 BATFQ16520 125 aa0.24□□□□□ -2.37
PMS1-203ENST00000409593 GLT8D1Q68CQ7 371 aa0.24□□□□□ -2.37
PMS1-203ENST00000409593 ZNF826PQ6ZT77 177 aa0.24□□□□□ -2.37
PMS1-203ENST00000409593 OR4D11Q8NGI4 311 aa0.24□□□□□ -2.37
PMS1-203ENST00000409593 C7orf50Q9BRJ6 194 aaKnown RBP0.24□□□□□ -2.37
PMS1-203ENST00000409593 CISHQ9NSE2 258 aa0.24□□□□□ -2.37
PMS1-203ENST00000409593 SSPOA2VEC9 5147 aa0.24□□□□□ -2.37
PMS1-203ENST00000409593 SSNA1O43805 119 aa0.24□□□□□ -2.37
PMS1-203ENST00000409593 CALUO43852 315 aaPredicted RBP0.24□□□□□ -2.37
PMS1-203ENST00000409593 TYMSP04818 313 aa0.24□□□□□ -2.37
PMS1-203ENST00000409593 HTR1AP08908 422 aa0.24□□□□□ -2.37
PMS1-203ENST00000409593 PHF13Q86YI8 300 aaPredicted RBP0.24□□□□□ -2.37
PMS1-203ENST00000409593 TMEM156Q8N614 296 aa0.24□□□□□ -2.37
PMS1-203ENST00000409593 OR2T4Q8NH00 348 aa0.24□□□□□ -2.37
PMS1-203ENST00000409593 ZNF418Q8TF45 676 aaPredicted RBP0.24□□□□□ -2.37
PMS1-203ENST00000409593 DIRAS2Q96HU8 199 aa0.24□□□□□ -2.37
PMS1-203ENST00000409593 MAP1LC3AQ9H492 121 aa0.24□□□□□ -2.37
PMS1-203ENST00000409593 PLEKHJ1Q9NW61 149 aa0.24□□□□□ -2.37
PMS1-203ENST00000409593 CKLFQ9UBR5 152 aa0.24□□□□□ -2.37
PMS1-203ENST00000409593 FRAS1Q86XX4 4008 aa0.23□□□□□ -2.37
PMS1-203ENST00000409593 MAST2Q6P0Q8 1798 aa0.23□□□□□ -2.37
PMS1-203ENST00000409593 C2orf70A6NJV1 201 aa0.23□□□□□ -2.37
PMS1-203ENST00000409593 M0QX08 132 aa0.23□□□□□ -2.37
PMS1-203ENST00000409593 OR1I1O60431 355 aa0.23□□□□□ -2.37
PMS1-203ENST00000409593 COX5BP10606 129 aa0.23□□□□□ -2.37
PMS1-203ENST00000409593 MAP3K7CLP57077 242 aa0.23□□□□□ -2.37
PMS1-203ENST00000409593 RAB4BP61018 213 aa0.23□□□□□ -2.37
PMS1-203ENST00000409593 Q6ZQT0 140 aa0.23□□□□□ -2.37
PMS1-203ENST00000409593 RASSF5Q8WWW0 418 aa0.23□□□□□ -2.37
PMS1-203ENST00000409593 ZNF462Q96JM2 2506 aa0.23□□□□□ -2.37
PMS1-203ENST00000409593 FAT4Q6V0I7 4981 aa0.23□□□□□ -2.37
PMS1-203ENST00000409593 LINC00854A0A1B0GVQ3 168 aa0.22□□□□□ -2.37
PMS1-203ENST00000409593 EVPLLA8MZ36 301 aa0.22□□□□□ -2.37
PMS1-203ENST00000409593 PFDN6O15212 129 aa0.22□□□□□ -2.37
PMS1-203ENST00000409593 CTSDP07339 412 aaPredicted RBP0.22□□□□□ -2.37
PMS1-203ENST00000409593 OCMP0CE72 109 aaPredicted RBP0.22□□□□□ -2.37
PMS1-203ENST00000409593 SPI1P17947 270 aa0.22□□□□□ -2.37
PMS1-203ENST00000409593 SKP1P63208 163 aa0.22□□□□□ -2.37
PMS1-203ENST00000409593 MLLT11Q13015 90 aaPredicted RBP0.22□□□□□ -2.37
PMS1-203ENST00000409593 TRBV20OR9-2A0A075B6H5 130 aa0.21□□□□□ -2.38
PMS1-203ENST00000409593 GOLGA8KD6RF30 607 aa0.21□□□□□ -2.38
PMS1-203ENST00000409593 INMT-MINDY4F8WBC2 141 aa0.21□□□□□ -2.38
PMS1-203ENST00000409593 C8orf88P0DMB2 117 aa0.21□□□□□ -2.38
PMS1-203ENST00000409593 CRYGAP11844 174 aa0.21□□□□□ -2.38
PMS1-203ENST00000409593 DEFB125Q8N687 156 aa0.21□□□□□ -2.38
PMS1-203ENST00000409593 GPR32P1Q8NGA4 272 aa0.21□□□□□ -2.38
PMS1-203ENST00000409593 GINS4Q9BRT9 223 aa0.21□□□□□ -2.38
PMS1-203ENST00000409593 ANKRD17O75179 2603 aaKnown RBP0.21□□□□□ -2.38
PMS1-203ENST00000409593 NAV3Q8IVL0 2385 aa0.21□□□□□ -2.38
PMS1-203ENST00000409593 RALGAPA2Q2PPJ7 1873 aa0.21□□□□□ -2.38
PMS1-203ENST00000409593 GOLGA6L19H0YKK7 550 aa0.21□□□□□ -2.38
PMS1-203ENST00000409593 RPL12P30050 165 aaKnown RBP0.21□□□□□ -2.38
PMS1-203ENST00000409593 CCL20P78556 96 aa0.21□□□□□ -2.38
PMS1-203ENST00000409593 GUK1Q16774 197 aa0.21□□□□□ -2.38
PMS1-203ENST00000409593 AADACL3Q5VUY0 350 aa0.21□□□□□ -2.38
PMS1-203ENST00000409593 SFXN4Q6P4A7 337 aa0.21□□□□□ -2.38
PMS1-203ENST00000409593 BPIFA4PQ86YQ2 179 aa0.21□□□□□ -2.38
PMS1-203ENST00000409593 MCFD2Q8NI22 146 aa0.21□□□□□ -2.38
PMS1-203ENST00000409593 ATP6V1G3Q96LB4 118 aa0.21□□□□□ -2.38
PMS1-203ENST00000409593 CNBD2Q96M20 576 aa0.21□□□□□ -2.38
PMS1-203ENST00000409593 SCGB3A1Q96QR1 104 aa0.21□□□□□ -2.38
PMS1-203ENST00000409593 TP73-AS1Q9UF72 201 aa0.21□□□□□ -2.38
PMS1-203ENST00000409593 TRBV6-8A0A0A6YYG3 113 aa0.2□□□□□ -2.38
PMS1-203ENST00000409593 A0A0J9YY10 115 aa0.2□□□□□ -2.38
PMS1-203ENST00000409593 A0A1B0GX78 115 aa0.2□□□□□ -2.38
PMS1-203ENST00000409593 M0R2N4 97 aa0.2□□□□□ -2.38
PMS1-203ENST00000409593 CXCR6O00574 342 aa0.2□□□□□ -2.38
PMS1-203ENST00000409593 PDE6HQ13956 83 aa0.2□□□□□ -2.38
PMS1-203ENST00000409593 GRK1Q15835 563 aa0.2□□□□□ -2.38
PMS1-203ENST00000409593 C1orf195Q5TG92 126 aa0.2□□□□□ -2.38
PMS1-203ENST00000409593 DPPA3Q6W0C5 159 aa0.2□□□□□ -2.38
PMS1-203ENST00000409593 PLEKHG7Q6ZR37 379 aa0.2□□□□□ -2.38
PMS1-203ENST00000409593 DEFB128Q7Z7B8 93 aa0.2□□□□□ -2.38
PMS1-203ENST00000409593 KLK6Q92876 244 aa0.2□□□□□ -2.38
PMS1-203ENST00000409593 DERL1Q9BUN8 251 aa0.2□□□□□ -2.38
PMS1-203ENST00000409593 XPNPEP1Q9NQW7 623 aa0.2□□□□□ -2.38
PMS1-203ENST00000409593 CACNA1EQ15878 2313 aa0.2□□□□□ -2.38
PMS1-203ENST00000409593 TTC28Q96AY4 2481 aa0.19□□□□□ -2.38
PMS1-203ENST00000409593 ABCC11Q96J66 1382 aa0.19□□□□□ -2.38
PMS1-203ENST00000409593 NCR3O14931 201 aa0.19□□□□□ -2.38
PMS1-203ENST00000409593 PRH1P02810 166 aa0.19□□□□□ -2.38
PMS1-203ENST00000409593 CASQ1P31415 396 aa0.19□□□□□ -2.38
PMS1-203ENST00000409593 BLVRAP53004 296 aa0.19□□□□□ -2.38
PMS1-203ENST00000409593 CNBPP62633 177 aaKnown RBP0.19□□□□□ -2.38
PMS1-203ENST00000409593 IFITM2Q01629 132 aa0.19□□□□□ -2.38
PMS1-203ENST00000409593 COQ5Q5HYK3 327 aa0.19□□□□□ -2.38
PMS1-203ENST00000409593 SPANXN5Q5MJ07 72 aa0.19□□□□□ -2.38
PMS1-203ENST00000409593 ALKAL1Q6UXT8 129 aa0.19□□□□□ -2.38
PMS1-203ENST00000409593 OR4E2Q8NGC2 313 aa0.19□□□□□ -2.38
PMS1-203ENST00000409593 BORCS5Q969J3 196 aa0.19□□□□□ -2.38
PMS1-203ENST00000409593 CMTM5Q96DZ9 223 aa0.19□□□□□ -2.38
PMS1-203ENST00000409593 TMEM147Q9BVK8 224 aa0.19□□□□□ -2.38
PMS1-203ENST00000409593 OR51I1Q9H343 314 aa0.19□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms