RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 A0A0B4J293 547 aa13.71□□□□□ -0.21
PDLIM2-206ENST00000409141 MFSD2BA6NFX1 497 aa13.71□□□□□ -0.21
PDLIM2-206ENST00000409141 CRYM-AS1A6NIL9 109 aa13.71□□□□□ -0.21
PDLIM2-206ENST00000409141 GGCTO75223 188 aaKnown RBP13.71□□□□□ -0.21
PDLIM2-206ENST00000409141 CDS2O95674 445 aa13.71□□□□□ -0.21
PDLIM2-206ENST00000409141 P0C879 139 aa13.71□□□□□ -0.21
PDLIM2-206ENST00000409141 ARL3P36405 182 aa13.71□□□□□ -0.21
PDLIM2-206ENST00000409141 SGPP2Q8IWX5 399 aa13.71□□□□□ -0.21
PDLIM2-206ENST00000409141 KCNIP3Q9Y2W7 256 aa13.71□□□□□ -0.21
PDLIM2-206ENST00000409141 F11RQ9Y624 299 aaKnown RBP13.71□□□□□ -0.21
PDLIM2-206ENST00000409141 OR2C1O95371 312 aa13.7□□□□□ -0.22
PDLIM2-206ENST00000409141 HLA-AP01891 365 aaKnown RBP13.7□□□□□ -0.22
PDLIM2-206ENST00000409141 CLEC3BP05452 202 aa13.7□□□□□ -0.22
PDLIM2-206ENST00000409141 AKR1C4P17516 323 aa13.7□□□□□ -0.22
PDLIM2-206ENST00000409141 PRCDQ00LT1 54 aa13.7□□□□□ -0.22
PDLIM2-206ENST00000409141 ZNF57Q68EA5 555 aaPredicted RBP13.7□□□□□ -0.22
PDLIM2-206ENST00000409141 IL34Q6ZMJ4 242 aa13.7□□□□□ -0.22
PDLIM2-206ENST00000409141 OR1L6Q8NGR2 347 aa13.7□□□□□ -0.22
PDLIM2-206ENST00000409141 SRRQ9GZT4 340 aa13.7□□□□□ -0.22
PDLIM2-206ENST00000409141 PEMTQ9UBM1 199 aa13.7□□□□□ -0.22
PDLIM2-206ENST00000409141 SPNP16150 400 aa13.69□□□□□ -0.22
PDLIM2-206ENST00000409141 MFAP2P55001 183 aa13.69□□□□□ -0.22
PDLIM2-206ENST00000409141 HAPLN4Q86UW8 402 aa13.69□□□□□ -0.22
PDLIM2-206ENST00000409141 SELENOHQ8IZQ5 122 aaKnown RBP13.69□□□□□ -0.22
PDLIM2-206ENST00000409141 VN1R17PQ8TDU5 208 aa13.69□□□□□ -0.22
PDLIM2-206ENST00000409141 DEDD2Q8WXF8 326 aa13.69□□□□□ -0.22
PDLIM2-206ENST00000409141 RBPMSQ93062 196 aaKnown RBP13.69□□□□□ -0.22
PDLIM2-206ENST00000409141 SORL1Q92673 2214 aa13.69□□□□□ -0.22
PDLIM2-206ENST00000409141 IFNA17P01571 189 aa13.68□□□□□ -0.22
PDLIM2-206ENST00000409141 INPP1P49441 399 aa13.68□□□□□ -0.22
PDLIM2-206ENST00000409141 DCTN2Q13561 401 aaKnown RBP13.68□□□□□ -0.22
PDLIM2-206ENST00000409141 SPINK9Q5DT21 86 aa13.68□□□□□ -0.22
PDLIM2-206ENST00000409141 TMEM268Q5VZI3 342 aa13.68□□□□□ -0.22
PDLIM2-206ENST00000409141 OR2C3Q8N628 320 aa13.68□□□□□ -0.22
PDLIM2-206ENST00000409141 LHFPL5Q8TAF8 219 aa13.68□□□□□ -0.22
PDLIM2-206ENST00000409141 ZNF502Q8TBZ5 544 aa13.68□□□□□ -0.22
PDLIM2-206ENST00000409141 TMEM230Q96A57 120 aa13.68□□□□□ -0.22
PDLIM2-206ENST00000409141 PDCD10Q9BUL8 212 aa13.68□□□□□ -0.22
PDLIM2-206ENST00000409141 PLEKHA3Q9HB20 300 aa13.68□□□□□ -0.22
PDLIM2-206ENST00000409141 IGHV3-21A0A0B4J1V1 117 aa13.67□□□□□ -0.22
PDLIM2-206ENST00000409141 A0A0G2JRQ6 117 aa13.67□□□□□ -0.22
PDLIM2-206ENST00000409141 ST8SIA3O43173 380 aa13.67□□□□□ -0.22
PDLIM2-206ENST00000409141 IGLV1-51P01701 117 aa13.67□□□□□ -0.22
PDLIM2-206ENST00000409141 CSN3P07498 182 aa13.67□□□□□ -0.22
PDLIM2-206ENST00000409141 ERHP84090 104 aaKnown RBP13.67□□□□□ -0.22
PDLIM2-206ENST00000409141 FAM219AQ8IW50 185 aa13.67□□□□□ -0.22
PDLIM2-206ENST00000409141 SLC35G3Q8N808 338 aa13.67□□□□□ -0.22
PDLIM2-206ENST00000409141 OR1P1Q8NH06 330 aa13.67□□□□□ -0.22
PDLIM2-206ENST00000409141 GALNT14Q96FL9 552 aa13.67□□□□□ -0.22
PDLIM2-206ENST00000409141 ZC4H2Q9NQZ6 224 aa13.67□□□□□ -0.22
PDLIM2-206ENST00000409141 GPR183P32249 361 aa13.67□□□□□ -0.22
PDLIM2-206ENST00000409141 TMEM187Q14656 261 aa13.67□□□□□ -0.22
PDLIM2-206ENST00000409141 BAK1Q16611 211 aa13.67□□□□□ -0.22
PDLIM2-206ENST00000409141 FAM106AQ4KMX7 169 aa13.67□□□□□ -0.22
PDLIM2-206ENST00000409141 TRIQKQ629K1 86 aa13.67□□□□□ -0.22
PDLIM2-206ENST00000409141 Q6ZRM9 215 aa13.67□□□□□ -0.22
PDLIM2-206ENST00000409141 GPHB5Q86YW7 130 aa13.67□□□□□ -0.22
PDLIM2-206ENST00000409141 TMEM56-RWDD3S4R434 201 aa13.67□□□□□ -0.22
PDLIM2-206ENST00000409141 ZNF320A2RRD8 509 aa13.66□□□□□ -0.22
PDLIM2-206ENST00000409141 GP9P14770 177 aa13.66□□□□□ -0.22
PDLIM2-206ENST00000409141 PLET1Q6UQ28 207 aa13.66□□□□□ -0.22
PDLIM2-206ENST00000409141 TMED4Q7Z7H5 227 aa13.66□□□□□ -0.22
PDLIM2-206ENST00000409141 SCARB1Q8WTV0 552 aa13.66□□□□□ -0.22
PDLIM2-206ENST00000409141 MISP3Q96FF7 219 aa13.66□□□□□ -0.22
PDLIM2-206ENST00000409141 SLC25A21Q9BQT8 299 aaPredicted RBP13.66□□□□□ -0.22
PDLIM2-206ENST00000409141 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.66□□□□□ -0.22
PDLIM2-206ENST00000409141 SIGLEC8Q9NYZ4 499 aa13.66□□□□□ -0.22
PDLIM2-206ENST00000409141 PRR13Q9NZ81 148 aa13.66□□□□□ -0.22
PDLIM2-206ENST00000409141 LSM4Q9Y4Z0 139 aaKnown RBP13.66□□□□□ -0.22
PDLIM2-206ENST00000409141 LGALS9O00182 355 aa13.65□□□□□ -0.22
PDLIM2-206ENST00000409141 ANXA3P12429 323 aa13.65□□□□□ -0.22
PDLIM2-206ENST00000409141 SNCAP37840 140 aa13.65□□□□□ -0.22
PDLIM2-206ENST00000409141 SUPT4H1P63272 117 aaKnown RBP13.65□□□□□ -0.22
PDLIM2-206ENST00000409141 ZNF114Q8NC26 417 aa13.65□□□□□ -0.22
PDLIM2-206ENST00000409141 IL22RA2Q969J5 263 aa13.65□□□□□ -0.22
PDLIM2-206ENST00000409141 GPR146Q96CH1 333 aa13.65□□□□□ -0.22
PDLIM2-206ENST00000409141 ENY2Q9NPA8 101 aa13.65□□□□□ -0.22
PDLIM2-206ENST00000409141 C21orf62Q9NYP8 219 aa13.65□□□□□ -0.22
PDLIM2-206ENST00000409141 OR2T8A6NH00 312 aa13.64□□□□□ -0.23
PDLIM2-206ENST00000409141 K7EIM0 57 aa13.64□□□□□ -0.23
PDLIM2-206ENST00000409141 HOXA1P49639 335 aaPredicted RBP13.64□□□□□ -0.23
PDLIM2-206ENST00000409141 UBAC2Q8NBM4 344 aa13.64□□□□□ -0.23
PDLIM2-206ENST00000409141 CACNG5Q9UF02 275 aa13.64□□□□□ -0.23
PDLIM2-206ENST00000409141 LINC00854A0A1B0GVQ3 168 aa13.63□□□□□ -0.23
PDLIM2-206ENST00000409141 INS-IGF2F8WCM5 200 aa13.63□□□□□ -0.23
PDLIM2-206ENST00000409141 TGOLN2O43493 480 aa13.63□□□□□ -0.23
PDLIM2-206ENST00000409141 Q56UQ5 140 aa13.63□□□□□ -0.23
PDLIM2-206ENST00000409141 TMEM128Q5BJH2 165 aa13.63□□□□□ -0.23
PDLIM2-206ENST00000409141 BSCL2Q96G97 398 aaPredicted RBP13.63□□□□□ -0.23
PDLIM2-206ENST00000409141 SDHCQ99643 169 aaPredicted RBP13.63□□□□□ -0.23
PDLIM2-206ENST00000409141 IGHV3-35A0A0C4DH35 117 aa13.62□□□□□ -0.23
PDLIM2-206ENST00000409141 NAP1L6A6NFF2 107 aa13.62□□□□□ -0.23
PDLIM2-206ENST00000409141 C2orf70A6NJV1 201 aa13.62□□□□□ -0.23
PDLIM2-206ENST00000409141 SUB1P53999 127 aaKnown RBP eCLIP13.62□□□□□ -0.23
PDLIM2-206ENST00000409141 SPCS3P61009 180 aa13.62□□□□□ -0.23
PDLIM2-206ENST00000409141 CD69Q07108 199 aa13.62□□□□□ -0.23
PDLIM2-206ENST00000409141 ADAMTSL5Q6ZMM2 481 aa13.62□□□□□ -0.23
PDLIM2-206ENST00000409141 LGI3Q8N145 548 aa13.62□□□□□ -0.23
PDLIM2-206ENST00000409141 PINX1Q96BK5 328 aaKnown RBP13.62□□□□□ -0.23
PDLIM2-206ENST00000409141 ATP6V0BQ99437 205 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms