RNA–Protein interactions for RNA: ENST00000409024.3

POLR1A-202, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-202ENST00000409024 PARP11Q9NR21 331 aa7.85□□□□□ -1.15
POLR1A-202ENST00000409024 METTL1Q9UBP6 276 aaKnown RBP7.85□□□□□ -1.15
POLR1A-202ENST00000409024 IGHV3-72A0A0B4J1Y9 119 aa7.84□□□□□ -1.15
POLR1A-202ENST00000409024 PRSS46E5RG02 174 aa7.84□□□□□ -1.15
POLR1A-202ENST00000409024 C17orf112F2Z3M2 114 aa7.84□□□□□ -1.15
POLR1A-202ENST00000409024 CORTO00230 105 aa7.84□□□□□ -1.15
POLR1A-202ENST00000409024 FBXO24O75426 580 aa7.84□□□□□ -1.15
POLR1A-202ENST00000409024 IGKV1D-33P01593 117 aa7.84□□□□□ -1.15
POLR1A-202ENST00000409024 IGKV1-33P01594 117 aa7.84□□□□□ -1.15
POLR1A-202ENST00000409024 MBP02144 154 aa7.84□□□□□ -1.15
POLR1A-202ENST00000409024 IFNA4P05014 189 aa7.84□□□□□ -1.15
POLR1A-202ENST00000409024 SAA4P35542 130 aa7.84□□□□□ -1.15
POLR1A-202ENST00000409024 RPL27AP46776 148 aaKnown RBP7.84□□□□□ -1.15
POLR1A-202ENST00000409024 MRGPRG-AS1Q2M3A8 158 aa7.84□□□□□ -1.15
POLR1A-202ENST00000409024 PVRIGQ6DKI7 326 aa7.84□□□□□ -1.15
POLR1A-202ENST00000409024 OR8G2PQ6IF36 304 aa7.84□□□□□ -1.15
POLR1A-202ENST00000409024 COMMD1Q8N668 190 aa7.84□□□□□ -1.15
POLR1A-202ENST00000409024 TEX29Q8N6K0 151 aa7.84□□□□□ -1.15
POLR1A-202ENST00000409024 HSD17B11Q8NBQ5 300 aa7.84□□□□□ -1.15
POLR1A-202ENST00000409024 OR2G3Q8NGZ4 309 aa7.84□□□□□ -1.15
POLR1A-202ENST00000409024 LYPD6BQ8NI32 183 aa7.84□□□□□ -1.15
POLR1A-202ENST00000409024 TAF15Q92804 592 aaKnown RBP eCLIP7.84□□□□□ -1.15
POLR1A-202ENST00000409024 REG4Q9BYZ8 158 aa7.84□□□□□ -1.15
POLR1A-202ENST00000409024 C7orf69Q9H7B7 122 aa7.84□□□□□ -1.15
POLR1A-202ENST00000409024 NPVFQ9HCQ7 196 aa7.84□□□□□ -1.15
POLR1A-202ENST00000409024 KCNIP2Q9NS61 270 aa7.84□□□□□ -1.15
POLR1A-202ENST00000409024 FBXO7Q9Y3I1 522 aa7.84□□□□□ -1.15
POLR1A-202ENST00000409024 RAB19A4D1S5 217 aa7.83□□□□□ -1.16
POLR1A-202ENST00000409024 ZNF705EA8MWA4 302 aaPredicted RBP7.83□□□□□ -1.16
POLR1A-202ENST00000409024 CA2P00918 260 aa7.83□□□□□ -1.16
POLR1A-202ENST00000409024 RNASE2P10153 161 aaKnown RBP7.83□□□□□ -1.16
POLR1A-202ENST00000409024 RAB31Q13636 194 aa7.83□□□□□ -1.16
POLR1A-202ENST00000409024 MMDQ15546 238 aa7.83□□□□□ -1.16
POLR1A-202ENST00000409024 C5orf64Q2M2E5 130 aa7.83□□□□□ -1.16
POLR1A-202ENST00000409024 Q5PR19 223 aa7.83□□□□□ -1.16
POLR1A-202ENST00000409024 AKR1C8PQ5T2L2 129 aa7.83□□□□□ -1.16
POLR1A-202ENST00000409024 ETFRF1Q6IPR1 90 aa7.83□□□□□ -1.16
POLR1A-202ENST00000409024 UQCC3Q6UW78 93 aa7.83□□□□□ -1.16
POLR1A-202ENST00000409024 ZNF562Q6V9R5 426 aa7.83□□□□□ -1.16
POLR1A-202ENST00000409024 IL34Q6ZMJ4 242 aa7.83□□□□□ -1.16
POLR1A-202ENST00000409024 SLC7A5P1Q8MH63 180 aa7.83□□□□□ -1.16
POLR1A-202ENST00000409024 ZNF709Q8N972 641 aa7.83□□□□□ -1.16
POLR1A-202ENST00000409024 AJUBAQ96IF1 538 aa7.83□□□□□ -1.16
POLR1A-202ENST00000409024 RITA1Q96K30 269 aa7.83□□□□□ -1.16
POLR1A-202ENST00000409024 HINT2Q9BX68 163 aa7.83□□□□□ -1.16
POLR1A-202ENST00000409024 HIF1ANQ9NWT6 349 aa7.83□□□□□ -1.16
POLR1A-202ENST00000409024 WDR83OSQ9Y284 106 aa7.83□□□□□ -1.16
POLR1A-202ENST00000409024 SONP18583 2426 aaKnown RBP7.83□□□□□ -1.16
POLR1A-202ENST00000409024 BTBD17A6NE02 478 aa7.82□□□□□ -1.16
POLR1A-202ENST00000409024 TEX46H3BTG2 121 aa7.82□□□□□ -1.16
POLR1A-202ENST00000409024 TMEM11P17152 192 aa7.82□□□□□ -1.16
POLR1A-202ENST00000409024 PRB3Q04118 309 aaPredicted RBP7.82□□□□□ -1.16
POLR1A-202ENST00000409024 HES1Q14469 280 aa7.82□□□□□ -1.16
POLR1A-202ENST00000409024 PLGLAQ15195 96 aa7.82□□□□□ -1.16
POLR1A-202ENST00000409024 TNXAQ16473 311 aa7.82□□□□□ -1.16
POLR1A-202ENST00000409024 SPINK9Q5DT21 86 aa7.82□□□□□ -1.16
POLR1A-202ENST00000409024 FAM74A1Q5RGS3 127 aa7.82□□□□□ -1.16
POLR1A-202ENST00000409024 LFNGQ8NES3 379 aa7.82□□□□□ -1.16
POLR1A-202ENST00000409024 MARC2Q969Z3 335 aa7.82□□□□□ -1.16
POLR1A-202ENST00000409024 FBXL15Q9H469 300 aa7.82□□□□□ -1.16
POLR1A-202ENST00000409024 ZANQ9Y493 2812 aa7.82□□□□□ -1.16
POLR1A-202ENST00000409024 UBE2L5PA0A1B0GUS4 154 aa7.81□□□□□ -1.16
POLR1A-202ENST00000409024 A0A1W2PRD5 423 aa7.81□□□□□ -1.16
POLR1A-202ENST00000409024 A0A1W2PRF3 423 aa7.81□□□□□ -1.16
POLR1A-202ENST00000409024 A0A1W2PRM7 423 aa7.81□□□□□ -1.16
POLR1A-202ENST00000409024 IGLC7A0M8Q6 106 aa7.81□□□□□ -1.16
POLR1A-202ENST00000409024 CGB1A6NKQ9 187 aa7.81□□□□□ -1.16
POLR1A-202ENST00000409024 CYB5BO43169 146 aa7.81□□□□□ -1.16
POLR1A-202ENST00000409024 HBE1P02100 147 aa7.81□□□□□ -1.16
POLR1A-202ENST00000409024 PRH1P02810 166 aa7.81□□□□□ -1.16
POLR1A-202ENST00000409024 FBP1P09467 338 aa7.81□□□□□ -1.16
POLR1A-202ENST00000409024 CNTFRP26992 372 aa7.81□□□□□ -1.16
POLR1A-202ENST00000409024 CAMLGP49069 296 aa7.81□□□□□ -1.16
POLR1A-202ENST00000409024 RAB2AP61019 212 aa7.81□□□□□ -1.16
POLR1A-202ENST00000409024 CD69Q07108 199 aa7.81□□□□□ -1.16
POLR1A-202ENST00000409024 BTNL8Q6UX41 500 aa7.81□□□□□ -1.16
POLR1A-202ENST00000409024 C16orf82Q7Z2V1 217 aa7.81□□□□□ -1.16
POLR1A-202ENST00000409024 TMEM144Q7Z5S9 345 aa7.81□□□□□ -1.16
POLR1A-202ENST00000409024 COMMD7Q86VX2 200 aa7.81□□□□□ -1.16
POLR1A-202ENST00000409024 DYNAPQ8N1N2 210 aa7.81□□□□□ -1.16
POLR1A-202ENST00000409024 PIP4P2Q8N4L2 257 aa7.81□□□□□ -1.16
POLR1A-202ENST00000409024 OR1P1Q8NH06 330 aa7.81□□□□□ -1.16
POLR1A-202ENST00000409024 TMEM170AQ8WVE7 144 aa7.81□□□□□ -1.16
POLR1A-202ENST00000409024 SRSF12Q8WXF0 261 aaKnown RBP7.81□□□□□ -1.16
POLR1A-202ENST00000409024 TMEM68Q96MH6 324 aa7.81□□□□□ -1.16
POLR1A-202ENST00000409024 TRAV1-1A0A0B4J248 108 aa7.8□□□□□ -1.16
POLR1A-202ENST00000409024 MFSD2BA6NFX1 497 aa7.8□□□□□ -1.16
POLR1A-202ENST00000409024 INAFM1C9JVW0 142 aa7.8□□□□□ -1.16
POLR1A-202ENST00000409024 E7EUB6 86 aa7.8□□□□□ -1.16
POLR1A-202ENST00000409024 CNIH1O95406 144 aa7.8□□□□□ -1.16
POLR1A-202ENST00000409024 HLA-DRB1P01911 266 aa7.8□□□□□ -1.16
POLR1A-202ENST00000409024 OR13C7P0DN81 318 aa7.8□□□□□ -1.16
POLR1A-202ENST00000409024 IGHV4-31P0DP07 118 aa7.8□□□□□ -1.16
POLR1A-202ENST00000409024 MYOD1P15172 320 aa7.8□□□□□ -1.16
POLR1A-202ENST00000409024 FGF7P21781 194 aa7.8□□□□□ -1.16
POLR1A-202ENST00000409024 OPRK1P41145 380 aa7.8□□□□□ -1.16
POLR1A-202ENST00000409024 WT1-ASQ06250 92 aa7.8□□□□□ -1.16
POLR1A-202ENST00000409024 PJVKQ0ZLH3 352 aa7.8□□□□□ -1.16
POLR1A-202ENST00000409024 TUSC1Q2TAM9 212 aa7.8□□□□□ -1.16
POLR1A-202ENST00000409024 TMEM249Q2WGJ8 235 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms