RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 PLXNA3P51805 1871 aa10.24□□□□□ -0.77
SMCR8-201ENST00000406438 FOXA2Q9Y261 457 aaPredicted RBP10.24□□□□□ -0.77
SMCR8-201ENST00000406438 BSPH1Q075Z2 132 aa10.24□□□□□ -0.77
SMCR8-201ENST00000406438 KIAA1644Q3SXP7 199 aa10.24□□□□□ -0.77
SMCR8-201ENST00000406438 ZNHIT1O43257 154 aa10.24□□□□□ -0.77
SMCR8-201ENST00000406438 LEMD1Q68G75 181 aa10.24□□□□□ -0.77
SMCR8-201ENST00000406438 KIR3DL3Q8N743 410 aa10.24□□□□□ -0.77
SMCR8-201ENST00000406438 MBD3L1Q8WWY6 194 aa10.24□□□□□ -0.77
SMCR8-201ENST00000406438 GGACTQ9BVM4 153 aa10.24□□□□□ -0.77
SMCR8-201ENST00000406438 LTBP4Q8N2S1 1624 aa10.24□□□□□ -0.77
SMCR8-201ENST00000406438 IGHV3-35A0A0C4DH35 117 aa10.24□□□□□ -0.77
SMCR8-201ENST00000406438 A0A1B0GUT8 65 aa10.24□□□□□ -0.77
SMCR8-201ENST00000406438 GATAD1Q8WUU5 269 aa10.24□□□□□ -0.77
SMCR8-201ENST00000406438 ELF5Q9UKW6 265 aaPredicted RBP10.24□□□□□ -0.77
SMCR8-201ENST00000406438 TNRC6AQ8NDV7 1962 aaKnown RBP10.24□□□□□ -0.77
SMCR8-201ENST00000406438 UCP3P55916 312 aa10.24□□□□□ -0.77
SMCR8-201ENST00000406438 ACP7Q6ZNF0 438 aa10.24□□□□□ -0.77
SMCR8-201ENST00000406438 TMEM54Q969K7 222 aa10.24□□□□□ -0.77
SMCR8-201ENST00000406438 HS3ST3B1Q9Y662 390 aa10.24□□□□□ -0.77
SMCR8-201ENST00000406438 LOC390937A0A1W2PQ73 354 aa10.24□□□□□ -0.77
SMCR8-201ENST00000406438 NPIPB9F8W1W9 429 aa10.24□□□□□ -0.77
SMCR8-201ENST00000406438 NPIPB7O75200 414 aa10.24□□□□□ -0.77
SMCR8-201ENST00000406438 GCHFRP30047 84 aa10.24□□□□□ -0.77
SMCR8-201ENST00000406438 ZNF324BQ6AW86 544 aaPredicted RBP10.24□□□□□ -0.77
SMCR8-201ENST00000406438 RTN4RL2Q86UN3 420 aa10.24□□□□□ -0.77
SMCR8-201ENST00000406438 FAM169BQ8N8A8 192 aa10.24□□□□□ -0.77
SMCR8-201ENST00000406438 PPP1R3EQ9H7J1 279 aa10.24□□□□□ -0.77
SMCR8-201ENST00000406438 MED13Q9UHV7 2174 aa10.23□□□□□ -0.77
SMCR8-201ENST00000406438 H3BTX0 84 aa10.23□□□□□ -0.77
SMCR8-201ENST00000406438 NBEAP1P0C6P0 100 aa10.23□□□□□ -0.77
SMCR8-201ENST00000406438 OR5AN1Q8NGI8 311 aa10.23□□□□□ -0.77
SMCR8-201ENST00000406438 LINC01560Q8TB33 94 aa10.23□□□□□ -0.77
SMCR8-201ENST00000406438 G6PC2Q9NQR9 355 aa10.23□□□□□ -0.77
SMCR8-201ENST00000406438 SIRT4Q9Y6E7 314 aaPredicted RBP10.23□□□□□ -0.77
SMCR8-201ENST00000406438 MYOD1P15172 320 aa10.23□□□□□ -0.77
SMCR8-201ENST00000406438 HOXA5P20719 270 aa10.23□□□□□ -0.77
SMCR8-201ENST00000406438 VDAC2P45880 294 aaPredicted RBP10.23□□□□□ -0.77
SMCR8-201ENST00000406438 DRAM1Q8N682 238 aa10.23□□□□□ -0.77
SMCR8-201ENST00000406438 GP6Q9HCN6 339 aa10.23□□□□□ -0.77
SMCR8-201ENST00000406438 NPIPB13A6NJU9 1138 aa10.23□□□□□ -0.77
SMCR8-201ENST00000406438 H0YL77 283 aa10.23□□□□□ -0.77
SMCR8-201ENST00000406438 ZIC3O60481 467 aa10.23□□□□□ -0.77
SMCR8-201ENST00000406438 PCP4P48539 62 aa10.23□□□□□ -0.77
SMCR8-201ENST00000406438 GZMMP51124 257 aa10.23□□□□□ -0.77
SMCR8-201ENST00000406438 SP7Q8TDD2 431 aaPredicted RBP10.23□□□□□ -0.77
SMCR8-201ENST00000406438 DPM3Q9P2X0 92 aa10.23□□□□□ -0.77
SMCR8-201ENST00000406438 ADAMTS9Q9P2N4 1935 aa10.23□□□□□ -0.77
SMCR8-201ENST00000406438 MED13LQ71F56 2210 aa10.23□□□□□ -0.77
SMCR8-201ENST00000406438 CRPP02741 224 aa10.23□□□□□ -0.77
SMCR8-201ENST00000406438 DDTP30046 118 aa10.23□□□□□ -0.77
SMCR8-201ENST00000406438 TBR1Q16650 682 aa10.23□□□□□ -0.77
SMCR8-201ENST00000406438 ZNF660Q6AZW8 331 aaPredicted RBP10.23□□□□□ -0.77
SMCR8-201ENST00000406438 IGHV3-49A0A0A0MS15 119 aa10.23□□□□□ -0.77
SMCR8-201ENST00000406438 IGLV1-36A0A0B4J1U3 117 aa10.23□□□□□ -0.77
SMCR8-201ENST00000406438 CDK2AP2O75956 126 aa10.23□□□□□ -0.77
SMCR8-201ENST00000406438 RND3P61587 244 aa10.23□□□□□ -0.77
SMCR8-201ENST00000406438 TMEM42Q69YG0 159 aa10.23□□□□□ -0.77
SMCR8-201ENST00000406438 ZIC4Q8N9L1 334 aa10.23□□□□□ -0.77
SMCR8-201ENST00000406438 PSMG3Q9BT73 122 aaPredicted RBP10.23□□□□□ -0.77
SMCR8-201ENST00000406438 GRIFINA4D1Z8 144 aa10.23□□□□□ -0.77
SMCR8-201ENST00000406438 GPR183P32249 361 aa10.23□□□□□ -0.77
SMCR8-201ENST00000406438 TMEM106BQ9NUM4 274 aa10.23□□□□□ -0.77
SMCR8-201ENST00000406438 C1orf100Q5SVJ3 147 aa10.22□□□□□ -0.77
SMCR8-201ENST00000406438 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.22□□□□□ -0.77
SMCR8-201ENST00000406438 SDHCQ99643 169 aaPredicted RBP10.22□□□□□ -0.77
SMCR8-201ENST00000406438 ZNF98A6NK75 572 aa10.22□□□□□ -0.77
SMCR8-201ENST00000406438 J3QW42 95 aa10.22□□□□□ -0.77
SMCR8-201ENST00000406438 NDUFA3O95167 84 aa10.22□□□□□ -0.77
SMCR8-201ENST00000406438 LDLRAD2Q5SZI1 272 aa10.22□□□□□ -0.77
SMCR8-201ENST00000406438 ASPHD2Q6ICH7 369 aa10.22□□□□□ -0.77
SMCR8-201ENST00000406438 RPRMQ9NS64 109 aa10.22□□□□□ -0.77
SMCR8-201ENST00000406438 TGIF1Q15583 401 aa10.22□□□□□ -0.77
SMCR8-201ENST00000406438 RNASEH2CQ8TDP1 164 aaKnown RBP10.22□□□□□ -0.77
SMCR8-201ENST00000406438 CBLN1P23435 193 aa10.22□□□□□ -0.77
SMCR8-201ENST00000406438 PPP1R27Q86WC6 154 aa10.22□□□□□ -0.77
SMCR8-201ENST00000406438 FBXL7Q9UJT9 491 aa10.22□□□□□ -0.77
SMCR8-201ENST00000406438 Q6AWC8 147 aa10.22□□□□□ -0.77
SMCR8-201ENST00000406438 TEX45Q8NA69 505 aa10.22□□□□□ -0.77
SMCR8-201ENST00000406438 OSR1Q8TAX0 266 aaPredicted RBP10.22□□□□□ -0.77
SMCR8-201ENST00000406438 NPCDR1Q9BY65 106 aa10.22□□□□□ -0.77
SMCR8-201ENST00000406438 NXT2Q9NPJ8 142 aaKnown RBP10.22□□□□□ -0.77
SMCR8-201ENST00000406438 VENTXO95231 258 aa10.22□□□□□ -0.77
SMCR8-201ENST00000406438 RPL39P5Q59GN2 51 aa10.22□□□□□ -0.77
SMCR8-201ENST00000406438 NPFFR1Q9GZQ6 430 aa10.22□□□□□ -0.77
SMCR8-201ENST00000406438 SIP14410 1827 aa10.21□□□□□ -0.77
SMCR8-201ENST00000406438 TRAV24A0A0B4J272 114 aa10.21□□□□□ -0.77
SMCR8-201ENST00000406438 A0A1B0GW15 77 aa10.21□□□□□ -0.77
SMCR8-201ENST00000406438 TMEM187Q14656 261 aa10.21□□□□□ -0.77
SMCR8-201ENST00000406438 SPAG8Q99932 426 aaPredicted RBP10.21□□□□□ -0.77
SMCR8-201ENST00000406438 TNS1Q9HBL0 1735 aaKnown RBP10.21□□□□□ -0.77
SMCR8-201ENST00000406438 OR10J3Q5JRS4 329 aa10.21□□□□□ -0.77
SMCR8-201ENST00000406438 TRBV5-7A0A0A0MS05 114 aa10.21□□□□□ -0.78
SMCR8-201ENST00000406438 KCNS1Q96KK3 526 aa10.21□□□□□ -0.78
SMCR8-201ENST00000406438 ORMDL3Q8N138 153 aa10.21□□□□□ -0.78
SMCR8-201ENST00000406438 LOC101059948A0A1B0GTJ6 334 aa10.21□□□□□ -0.78
SMCR8-201ENST00000406438 C19orf67A6NJJ6 358 aa10.21□□□□□ -0.78
SMCR8-201ENST00000406438 EIF3GO75821 320 aaKnown RBP eCLIP10.21□□□□□ -0.78
SMCR8-201ENST00000406438 RSPO4Q2I0M5 234 aaPredicted RBP10.21□□□□□ -0.78
SMCR8-201ENST00000406438 TMEM95Q3KNT9 176 aa10.21□□□□□ -0.78
SMCR8-201ENST00000406438 FAM181AQ8N9Y4 354 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms