RNA–Protein interactions for RNA: ENST00000404583.5

CDPF1-203, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CDPF1, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-203ENST00000404583 DMRT1Q9Y5R6 373 aa11.24□□□□□ -0.61
CDPF1-203ENST00000404583 IGLV11-55A0A075B6I3 123 aa11.23□□□□□ -0.61
CDPF1-203ENST00000404583 TRBV12-3P01733 135 aa11.23□□□□□ -0.61
CDPF1-203ENST00000404583 HIST1H1BP16401 226 aaKnown RBP11.23□□□□□ -0.61
CDPF1-203ENST00000404583 VAMP1P23763 118 aa11.23□□□□□ -0.61
CDPF1-203ENST00000404583 PRCDQ00LT1 54 aa11.23□□□□□ -0.61
CDPF1-203ENST00000404583 PPP1R1AQ13522 171 aa11.23□□□□□ -0.61
CDPF1-203ENST00000404583 EXOSC2Q13868 293 aaKnown RBP11.23□□□□□ -0.61
CDPF1-203ENST00000404583 KLK9Q2XQG4 91 aa11.23□□□□□ -0.61
CDPF1-203ENST00000404583 SLC25A24Q6NUK1 477 aa11.23□□□□□ -0.61
CDPF1-203ENST00000404583 LYZL2Q7Z4W2 148 aa11.23□□□□□ -0.61
CDPF1-203ENST00000404583 DCUN1D4Q92564 292 aa11.23□□□□□ -0.61
CDPF1-203ENST00000404583 DLX4Q92988 240 aaPredicted RBP11.23□□□□□ -0.61
CDPF1-203ENST00000404583 IL22RA2Q969J5 263 aa11.23□□□□□ -0.61
CDPF1-203ENST00000404583 RANGRFQ9HD47 186 aaPredicted RBP11.23□□□□□ -0.61
CDPF1-203ENST00000404583 PEF1Q9UBV8 284 aaKnown RBP11.23□□□□□ -0.61
CDPF1-203ENST00000404583 KLK9Q9UKQ9 250 aa11.23□□□□□ -0.61
CDPF1-203ENST00000404583 S4R3C0 116 aa11.23□□□□□ -0.61
CDPF1-203ENST00000404583 SFT2D2O95562 160 aa11.22□□□□□ -0.61
CDPF1-203ENST00000404583 IFNA17P01571 189 aa11.22□□□□□ -0.61
CDPF1-203ENST00000404583 IGHV3-23P01764 117 aa11.22□□□□□ -0.61
CDPF1-203ENST00000404583 MFAP2P55001 183 aa11.22□□□□□ -0.61
CDPF1-203ENST00000404583 IFITM3Q01628 133 aa11.22□□□□□ -0.61
CDPF1-203ENST00000404583 ANKRD55Q3KP44 614 aa11.22□□□□□ -0.61
CDPF1-203ENST00000404583 PDLIM3Q53GG5 364 aaPredicted RBP11.22□□□□□ -0.61
CDPF1-203ENST00000404583 LGI3Q8N145 548 aa11.22□□□□□ -0.61
CDPF1-203ENST00000404583 PDCD10Q9BUL8 212 aa11.22□□□□□ -0.61
CDPF1-203ENST00000404583 CACNG5Q9UF02 275 aa11.22□□□□□ -0.61
CDPF1-203ENST00000404583 F11RQ9Y624 299 aaKnown RBP11.22□□□□□ -0.61
CDPF1-203ENST00000404583 A0A0B4J2A0 478 aa11.21□□□□□ -0.61
CDPF1-203ENST00000404583 DUS4LO95620 317 aaKnown RBP11.21□□□□□ -0.61
CDPF1-203ENST00000404583 HOXD3P31249 432 aaPredicted RBP11.21□□□□□ -0.61
CDPF1-203ENST00000404583 DEFA1P59665 94 aa11.21□□□□□ -0.61
CDPF1-203ENST00000404583 DEFA3P59666 94 aa11.21□□□□□ -0.61
CDPF1-203ENST00000404583 BEAN1Q3B7T3 259 aa11.21□□□□□ -0.61
CDPF1-203ENST00000404583 OR2C3Q8N628 320 aa11.21□□□□□ -0.61
CDPF1-203ENST00000404583 PLEKHA3Q9HB20 300 aa11.21□□□□□ -0.61
CDPF1-203ENST00000404583 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.21□□□□□ -0.61
CDPF1-203ENST00000404583 SHPKQ9UHJ6 478 aa11.21□□□□□ -0.61
CDPF1-203ENST00000404583 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.2□□□□□ -0.62
CDPF1-203ENST00000404583 MFSD2BA6NFX1 497 aa11.2□□□□□ -0.62
CDPF1-203ENST00000404583 OVOL1O14753 267 aa11.2□□□□□ -0.62
CDPF1-203ENST00000404583 ANXA7P20073 488 aaKnown RBP11.2□□□□□ -0.62
CDPF1-203ENST00000404583 UBE2MP61081 183 aaKnown RBP11.2□□□□□ -0.62
CDPF1-203ENST00000404583 SRPXP78539 464 aa11.2□□□□□ -0.62
CDPF1-203ENST00000404583 ERHP84090 104 aaKnown RBP11.2□□□□□ -0.62
CDPF1-203ENST00000404583 MCRIP2Q9BUT9 160 aaKnown RBP11.2□□□□□ -0.62
CDPF1-203ENST00000404583 TBC1D24Q9ULP9 559 aa11.2□□□□□ -0.62
CDPF1-203ENST00000404583 C9orf170A2RU37 121 aa11.19□□□□□ -0.62
CDPF1-203ENST00000404583 PPP5D1E7EU14 171 aa11.19□□□□□ -0.62
CDPF1-203ENST00000404583 CYB5BO43169 146 aa11.19□□□□□ -0.62
CDPF1-203ENST00000404583 NXPH3O95157 252 aa11.19□□□□□ -0.62
CDPF1-203ENST00000404583 OR4E1P0C645 316 aa11.19□□□□□ -0.62
CDPF1-203ENST00000404583 SULT1A3P0DMM9 295 aa11.19□□□□□ -0.62
CDPF1-203ENST00000404583 SULT1A4P0DMN0 295 aa11.19□□□□□ -0.62
CDPF1-203ENST00000404583 ZP3P21754 424 aa11.19□□□□□ -0.62
CDPF1-203ENST00000404583 ASAH1Q13510 395 aa11.19□□□□□ -0.62
CDPF1-203ENST00000404583 AARDQ4LEZ3 155 aa11.19□□□□□ -0.62
CDPF1-203ENST00000404583 NMSQ5H8A3 153 aa11.19□□□□□ -0.62
CDPF1-203ENST00000404583 LRTM2Q8N967 370 aa11.19□□□□□ -0.62
CDPF1-203ENST00000404583 EEF1AKMT3Q96AZ1 226 aa11.19□□□□□ -0.62
CDPF1-203ENST00000404583 CCDC140Q96MF4 163 aa11.19□□□□□ -0.62
CDPF1-203ENST00000404583 THYN1Q9P016 225 aa11.19□□□□□ -0.62
CDPF1-203ENST00000404583 IGHV3-21A0A0B4J1V1 117 aa11.18□□□□□ -0.62
CDPF1-203ENST00000404583 SEC14L6B5MCN3 397 aa11.18□□□□□ -0.62
CDPF1-203ENST00000404583 BMPR1BO00238 502 aa11.18□□□□□ -0.62
CDPF1-203ENST00000404583 HLA-AP01891 365 aaKnown RBP11.18□□□□□ -0.62
CDPF1-203ENST00000404583 TCRBP04435 133 aa11.18□□□□□ -0.62
CDPF1-203ENST00000404583 HOXA1P49639 335 aaPredicted RBP11.18□□□□□ -0.62
CDPF1-203ENST00000404583 SPCS3P61009 180 aa11.18□□□□□ -0.62
CDPF1-203ENST00000404583 DHRS2Q13268 280 aa11.18□□□□□ -0.62
CDPF1-203ENST00000404583 RPEL1Q2QD12 228 aa11.18□□□□□ -0.62
CDPF1-203ENST00000404583 KPRPQ5T749 579 aaPredicted RBP11.18□□□□□ -0.62
CDPF1-203ENST00000404583 CLEC19AQ6UXS0 136 aa11.18□□□□□ -0.62
CDPF1-203ENST00000404583 OR1P1Q8NH06 330 aa11.18□□□□□ -0.62
CDPF1-203ENST00000404583 OR52E5Q8NH55 327 aa11.18□□□□□ -0.62
CDPF1-203ENST00000404583 CXorf58Q96LI9 332 aa11.18□□□□□ -0.62
CDPF1-203ENST00000404583 C20orf85Q9H1P6 137 aa11.18□□□□□ -0.62
CDPF1-203ENST00000404583 DNAH3Q8TD57 4116 aa11.18□□□□□ -0.62
CDPF1-203ENST00000404583 TRAV6A0A075B6T7 132 aa11.18□□□□□ -0.62
CDPF1-203ENST00000404583 TRBV7-1A0A0A6YYK4 115 aa11.18□□□□□ -0.62
CDPF1-203ENST00000404583 DUXBA0A1W2PPF3 345 aa11.18□□□□□ -0.62
CDPF1-203ENST00000404583 INS-IGF2F8WCM5 200 aa11.18□□□□□ -0.62
CDPF1-203ENST00000404583 PRB2P02812 416 aaPredicted RBP11.18□□□□□ -0.62
CDPF1-203ENST00000404583 HOXB5P09067 269 aa11.18□□□□□ -0.62
CDPF1-203ENST00000404583 KLF5Q13887 457 aaPredicted RBP11.18□□□□□ -0.62
CDPF1-203ENST00000404583 SMCO1Q147U7 214 aa11.18□□□□□ -0.62
CDPF1-203ENST00000404583 C4orf46Q504U0 113 aa11.18□□□□□ -0.62
CDPF1-203ENST00000404583 C9orf66Q5T8R8 295 aa11.18□□□□□ -0.62
CDPF1-203ENST00000404583 MZT2BQ6NZ67 158 aa11.18□□□□□ -0.62
CDPF1-203ENST00000404583 ZNF114Q8NC26 417 aa11.18□□□□□ -0.62
CDPF1-203ENST00000404583 OR1L6Q8NGR2 347 aa11.18□□□□□ -0.62
CDPF1-203ENST00000404583 GPR61Q9BZJ8 451 aa11.18□□□□□ -0.62
CDPF1-203ENST00000404583 ENY2Q9NPA8 101 aa11.18□□□□□ -0.62
CDPF1-203ENST00000404583 PIGBOS1A0A0B4J2F0 54 aa11.17□□□□□ -0.62
CDPF1-203ENST00000404583 FAM240BA0A1B0GVZ2 78 aa11.17□□□□□ -0.62
CDPF1-203ENST00000404583 CLEC3BP05452 202 aa11.17□□□□□ -0.62
CDPF1-203ENST00000404583 SNCAP37840 140 aa11.17□□□□□ -0.62
CDPF1-203ENST00000404583 SYNJ2BPP57105 145 aa11.17□□□□□ -0.62
CDPF1-203ENST00000404583 FAM209BQ5JX69 171 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms