RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 MS4A10Q96PG2 267 aa26.01■■□□□ 1.75
CSNK1E-204ENST00000403904 PF4V1P10720 104 aa26■■□□□ 1.75
CSNK1E-204ENST00000403904 IAPPP10997 89 aa26■■□□□ 1.75
CSNK1E-204ENST00000403904 C11orf44Q8N8P7 122 aa26■■□□□ 1.75
CSNK1E-204ENST00000403904 NMES1Q9C002 83 aa26■■□□□ 1.75
CSNK1E-204ENST00000403904 KLK15Q9H2R5 256 aa26■■□□□ 1.75
CSNK1E-204ENST00000403904 HIPK2Q9H2X6 1198 aa26■■□□□ 1.75
CSNK1E-204ENST00000403904 WRBO00258 174 aa25.99■■□□□ 1.75
CSNK1E-204ENST00000403904 DEFA4P12838 97 aa25.99■■□□□ 1.75
CSNK1E-204ENST00000403904 hCG_2014768A0A024R1R8 64 aa25.99■■□□□ 1.75
CSNK1E-204ENST00000403904 PSMB8P28062 276 aa25.99■■□□□ 1.75
CSNK1E-204ENST00000403904 SNCAP37840 140 aa25.99■■□□□ 1.75
CSNK1E-204ENST00000403904 KRTAP10-3P60369 221 aa25.99■■□□□ 1.75
CSNK1E-204ENST00000403904 HIST2H2BDQ6DRA6 164 aa25.99■■□□□ 1.75
CSNK1E-204ENST00000403904 WFDC12Q8WWY7 111 aa25.99■■□□□ 1.75
CSNK1E-204ENST00000403904 P2RX4Q99571 388 aa25.99■■□□□ 1.75
CSNK1E-204ENST00000403904 SSSCA1O60232 199 aa25.98■■□□□ 1.75
CSNK1E-204ENST00000403904 CYCSP99999 105 aaKnown RBP25.98■■□□□ 1.75
CSNK1E-204ENST00000403904 FOXE3Q13461 319 aa25.98■■□□□ 1.75
CSNK1E-204ENST00000403904 OR4X2Q8NGF9 303 aa25.98■■□□□ 1.75
CSNK1E-204ENST00000403904 LSM5Q9Y4Y9 91 aaKnown RBP25.98■■□□□ 1.75
CSNK1E-204ENST00000403904 F11RQ9Y624 299 aaKnown RBP25.98■■□□□ 1.75
CSNK1E-204ENST00000403904 S100A10P60903 97 aa25.97■■□□□ 1.75
CSNK1E-204ENST00000403904 RAB32Q13637 225 aa25.97■■□□□ 1.75
CSNK1E-204ENST00000403904 TCTEX1D4Q5JR98 221 aa25.97■■□□□ 1.75
CSNK1E-204ENST00000403904 COMMD1Q8N668 190 aa25.97■■□□□ 1.75
CSNK1E-204ENST00000403904 RCL1Q9Y2P8 373 aaKnown RBP25.97■■□□□ 1.75
CSNK1E-204ENST00000403904 DMRT1Q9Y5R6 373 aa25.97■■□□□ 1.75
CSNK1E-204ENST00000403904 K7EPK0 472 aa25.96■■□□□ 1.75
CSNK1E-204ENST00000403904 ELANEP08246 267 aa25.96■■□□□ 1.75
CSNK1E-204ENST00000403904 CD28P10747 220 aa25.96■■□□□ 1.75
CSNK1E-204ENST00000403904 SRSF4Q08170 494 aaKnown RBP25.96■■□□□ 1.75
CSNK1E-204ENST00000403904 TMEM65Q6PI78 240 aa25.96■■□□□ 1.75
CSNK1E-204ENST00000403904 ZNF436Q9C0F3 470 aaPredicted RBP25.96■■□□□ 1.75
CSNK1E-204ENST00000403904 A0A1B0GVG6 124 aa25.95■■□□□ 1.75
CSNK1E-204ENST00000403904 RAB9AP51151 201 aa25.95■■□□□ 1.75
CSNK1E-204ENST00000403904 MFAP2P55001 183 aa25.95■■□□□ 1.75
CSNK1E-204ENST00000403904 DEFA5Q01523 94 aa25.95■■□□□ 1.75
CSNK1E-204ENST00000403904 LRRC37A5PQ49AS3 106 aa25.95■■□□□ 1.75
CSNK1E-204ENST00000403904 ZNF114Q8NC26 417 aa25.95■■□□□ 1.75
CSNK1E-204ENST00000403904 FANCD2OSQ96PS1 177 aa25.95■■□□□ 1.75
CSNK1E-204ENST00000403904 H3BUA1 57 aa25.95■■□□□ 1.74
CSNK1E-204ENST00000403904 RPLP1P05386 114 aaKnown RBP25.95■■□□□ 1.74
CSNK1E-204ENST00000403904 MDFIQ99750 246 aa25.95■■□□□ 1.74
CSNK1E-204ENST00000403904 TRGV3P03979 118 aa25.94■■□□□ 1.74
CSNK1E-204ENST00000403904 RNASE2P10153 161 aaKnown RBP25.94■■□□□ 1.74
CSNK1E-204ENST00000403904 HTR2BP41595 481 aa25.94■■□□□ 1.74
CSNK1E-204ENST00000403904 BSXQ3C1V8 233 aa25.94■■□□□ 1.74
CSNK1E-204ENST00000403904 SLC25A24Q6NUK1 477 aa25.94■■□□□ 1.74
CSNK1E-204ENST00000403904 SLC24A4Q8NFF2 622 aa25.94■■□□□ 1.74
CSNK1E-204ENST00000403904 OR1P1Q8NH06 330 aa25.94■■□□□ 1.74
CSNK1E-204ENST00000403904 PPP1R1CQ8WVI7 109 aa25.94■■□□□ 1.74
CSNK1E-204ENST00000403904 CIB3Q96Q77 187 aaPredicted RBP25.94■■□□□ 1.74
CSNK1E-204ENST00000403904 TPPP2P59282 170 aa25.93■■□□□ 1.74
CSNK1E-204ENST00000403904 RNF152Q8N8N0 203 aa25.93■■□□□ 1.74
CSNK1E-204ENST00000403904 CHAC2Q8WUX2 184 aa25.93■■□□□ 1.74
CSNK1E-204ENST00000403904 SLA2Q9H6Q3 261 aa25.93■■□□□ 1.74
CSNK1E-204ENST00000403904 IGLV11-55A0A075B6I3 123 aa25.92■■□□□ 1.74
CSNK1E-204ENST00000403904 BRI3O95415 125 aa25.92■■□□□ 1.74
CSNK1E-204ENST00000403904 TMEM50AO95807 157 aa25.92■■□□□ 1.74
CSNK1E-204ENST00000403904 IFNA10P01566 189 aa25.92■■□□□ 1.74
CSNK1E-204ENST00000403904 U3KQ87 197 aa25.92■■□□□ 1.74
CSNK1E-204ENST00000403904 TRBV9A0A0B4J1U6 114 aa25.91■■□□□ 1.74
CSNK1E-204ENST00000403904 OR2J3O76001 311 aa25.91■■□□□ 1.74
CSNK1E-204ENST00000403904 SUB1P53999 127 aaKnown RBP eCLIP25.91■■□□□ 1.741e-6■■■■■ 30.8
CSNK1E-204ENST00000403904 PAX9P55771 341 aa25.91■■□□□ 1.74
CSNK1E-204ENST00000403904 TMEM170AQ8WVE7 144 aa25.91■■□□□ 1.74
CSNK1E-204ENST00000403904 RAB40CQ96S21 281 aa25.91■■□□□ 1.74
CSNK1E-204ENST00000403904 H3BP45 60 aa25.9■■□□□ 1.74
CSNK1E-204ENST00000403904 RHOGP84095 191 aa25.9■■□□□ 1.74
CSNK1E-204ENST00000403904 NPY1RP25929 384 aa25.9■■□□□ 1.74
CSNK1E-204ENST00000403904 CD83Q01151 205 aa25.9■■□□□ 1.74
CSNK1E-204ENST00000403904 C12orf54Q6X4T0 127 aa25.9■■□□□ 1.74
CSNK1E-204ENST00000403904 OR1L6Q8NGR2 347 aa25.9■■□□□ 1.74
CSNK1E-204ENST00000403904 SMIM8Q96KF7 97 aa25.9■■□□□ 1.74
CSNK1E-204ENST00000403904 CITED2Q99967 270 aaPredicted RBP25.9■■□□□ 1.74
CSNK1E-204ENST00000403904 ZFP57Q9NU63 452 aa25.9■■□□□ 1.74
CSNK1E-204ENST00000403904 PSENENQ9NZ42 101 aa25.9■■□□□ 1.74
CSNK1E-204ENST00000403904 GIPP09681 153 aaPredicted RBP25.89■■□□□ 1.73
CSNK1E-204ENST00000403904 HIST1H1BP16401 226 aaKnown RBP25.89■■□□□ 1.73
CSNK1E-204ENST00000403904 KIAA0141Q14154 515 aaPredicted RBP25.89■■□□□ 1.73
CSNK1E-204ENST00000403904 KLK9Q2XQG4 91 aa25.89■■□□□ 1.73
CSNK1E-204ENST00000403904 C2orf83Q53S99 150 aa25.89■■□□□ 1.73
CSNK1E-204ENST00000403904 KHDC1LQ5JSQ8 128 aa25.89■■□□□ 1.73
CSNK1E-204ENST00000403904 SPANXN5Q5MJ07 72 aa25.89■■□□□ 1.73
CSNK1E-204ENST00000403904 FBXL7Q9UJT9 491 aa25.89■■□□□ 1.73
CSNK1E-204ENST00000403904 KLK9Q9UKQ9 250 aa25.89■■□□□ 1.73
CSNK1E-204ENST00000403904 STAB1Q9NY15 2570 aa25.88■■□□□ 1.73
CSNK1E-204ENST00000403904 TCRBV4S1A1TA0A5B7 111 aa25.88■■□□□ 1.73
CSNK1E-204ENST00000403904 CYB5BO43169 146 aa25.88■■□□□ 1.73
CSNK1E-204ENST00000403904 NDUFB8O95169 186 aa25.88■■□□□ 1.73
CSNK1E-204ENST00000403904 NECAP1Q8NC96 275 aa25.88■■□□□ 1.73
CSNK1E-204ENST00000403904 MYOZ3Q8TDC0 251 aa25.88■■□□□ 1.73
CSNK1E-204ENST00000403904 MISP3Q96FF7 219 aa25.88■■□□□ 1.73
CSNK1E-204ENST00000403904 L7N2F9 121 aa25.87■■□□□ 1.73
CSNK1E-204ENST00000403904 MPC2O95563 127 aa25.87■■□□□ 1.73
CSNK1E-204ENST00000403904 LY86O95711 162 aa25.87■■□□□ 1.73
CSNK1E-204ENST00000403904 VAMP2P63027 116 aa25.87■■□□□ 1.73
CSNK1E-204ENST00000403904 C11orf1Q9H5F2 150 aa25.87■■□□□ 1.73
CSNK1E-204ENST00000403904 PAIP2BQ9ULR5 123 aaKnown RBP25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms