RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 OR1L8Q8NGR8 309 aa8.39□□□□□ -1.07
PTPRM-203ENST00000400060 SIGLEC8Q9NYZ4 499 aa8.39□□□□□ -1.07
PTPRM-203ENST00000400060 TDRD15B5MCY1 1934 aaKnown RBP8.39□□□□□ -1.07
PTPRM-203ENST00000400060 OR2J3O76001 311 aa8.39□□□□□ -1.07
PTPRM-203ENST00000400060 MT-CO3P00414 261 aa8.39□□□□□ -1.07
PTPRM-203ENST00000400060 IFITM1P13164 125 aa8.39□□□□□ -1.07
PTPRM-203ENST00000400060 RAC3P60763 192 aa8.39□□□□□ -1.07
PTPRM-203ENST00000400060 CT83Q5H943 113 aa8.39□□□□□ -1.07
PTPRM-203ENST00000400060 HES3Q5TGS1 186 aa8.39□□□□□ -1.07
PTPRM-203ENST00000400060 ATP6V0E2Q8NHE4 81 aa8.39□□□□□ -1.07
PTPRM-203ENST00000400060 CXXC4Q9H2H0 198 aa8.39□□□□□ -1.07
PTPRM-203ENST00000400060 DLL3Q9NYJ7 618 aa8.39□□□□□ -1.07
PTPRM-203ENST00000400060 SMIM27A0A1W2PRY6 76 aa8.39□□□□□ -1.07
PTPRM-203ENST00000400060 IGKCP01834 107 aa8.39□□□□□ -1.07
PTPRM-203ENST00000400060 CDCP2Q5VXM1 449 aa8.39□□□□□ -1.07
PTPRM-203ENST00000400060 FAM231DQ6ZW35 169 aa8.39□□□□□ -1.07
PTPRM-203ENST00000400060 C11orf52Q96A22 123 aa8.39□□□□□ -1.07
PTPRM-203ENST00000400060 VGLL1Q99990 258 aa8.39□□□□□ -1.07
PTPRM-203ENST00000400060 AKIRIN1Q9H9L7 192 aaPredicted RBP8.39□□□□□ -1.07
PTPRM-203ENST00000400060 HIGD1AQ9Y241 93 aa8.39□□□□□ -1.07
PTPRM-203ENST00000400060 KLF12Q9Y4X4 402 aa8.39□□□□□ -1.07
PTPRM-203ENST00000400060 SCN2AQ99250 2005 aa8.38□□□□□ -1.07
PTPRM-203ENST00000400060 IGKV1-9A0A0C4DH69 117 aa8.38□□□□□ -1.07
PTPRM-203ENST00000400060 WIPI1Q5MNZ9 446 aaPredicted RBP8.38□□□□□ -1.07
PTPRM-203ENST00000400060 PAPPA-AS1Q5QFB9 102 aa8.38□□□□□ -1.07
PTPRM-203ENST00000400060 YAE1D1Q9NRH1 226 aa8.38□□□□□ -1.07
PTPRM-203ENST00000400060 TRBV20-1A0A075B6N2 111 aa8.38□□□□□ -1.07
PTPRM-203ENST00000400060 PGPA6NDG6 321 aa8.38□□□□□ -1.07
PTPRM-203ENST00000400060 SLC25A48Q6ZT89 311 aaKnown RBP8.38□□□□□ -1.07
PTPRM-203ENST00000400060 TCF19Q9Y242 345 aa8.38□□□□□ -1.07
PTPRM-203ENST00000400060 PLXNA3P51805 1871 aa8.38□□□□□ -1.07
PTPRM-203ENST00000400060 NPIPB11E5RHQ5 1161 aa8.38□□□□□ -1.07
PTPRM-203ENST00000400060 J3KRW8 73 aa8.38□□□□□ -1.07
PTPRM-203ENST00000400060 DEFA4P12838 97 aa8.38□□□□□ -1.07
PTPRM-203ENST00000400060 KLF17Q5JT82 389 aaPredicted RBP8.38□□□□□ -1.07
PTPRM-203ENST00000400060 ZNF775Q96BV0 537 aaPredicted RBP8.38□□□□□ -1.07
PTPRM-203ENST00000400060 RAX2Q96IS3 184 aa8.38□□□□□ -1.07
PTPRM-203ENST00000400060 RFNGQ9Y644 331 aa8.38□□□□□ -1.07
PTPRM-203ENST00000400060 CKAP5Q14008 2032 aa8.38□□□□□ -1.07
PTPRM-203ENST00000400060 TRAV26-1A0A087WT03 109 aa8.38□□□□□ -1.07
PTPRM-203ENST00000400060 A0A1B0GUS0 222 aa8.38□□□□□ -1.07
PTPRM-203ENST00000400060 CEACAM3P40198 252 aa8.38□□□□□ -1.07
PTPRM-203ENST00000400060 GAB4Q2WGN9 574 aa8.38□□□□□ -1.07
PTPRM-203ENST00000400060 PRNTQ86SH4 94 aa8.38□□□□□ -1.07
PTPRM-203ENST00000400060 H1FXQ92522 213 aaKnown RBP8.38□□□□□ -1.07
PTPRM-203ENST00000400060 IFI27L1Q96BM0 104 aa8.38□□□□□ -1.07
PTPRM-203ENST00000400060 SPXQ9BT56 116 aa8.38□□□□□ -1.07
PTPRM-203ENST00000400060 SCRT1Q9BWW7 348 aa8.38□□□□□ -1.07
PTPRM-203ENST00000400060 PLA2G2FQ9BZM2 168 aa8.38□□□□□ -1.07
PTPRM-203ENST00000400060 NXT2Q9NPJ8 142 aaKnown RBP8.38□□□□□ -1.07
PTPRM-203ENST00000400060 LINC01549A6NIU2 74 aa8.37□□□□□ -1.07
PTPRM-203ENST00000400060 LINC01565O15544 149 aa8.37□□□□□ -1.07
PTPRM-203ENST00000400060 NDUFB8O95169 186 aa8.37□□□□□ -1.07
PTPRM-203ENST00000400060 IGFBP2P18065 325 aa8.37□□□□□ -1.07
PTPRM-203ENST00000400060 SSTR5P35346 364 aa8.37□□□□□ -1.07
PTPRM-203ENST00000400060 LGALS9BQ3B8N2 356 aa8.37□□□□□ -1.07
PTPRM-203ENST00000400060 LGALS9CQ6DKI2 356 aa8.37□□□□□ -1.07
PTPRM-203ENST00000400060 GP6Q9HCN6 339 aa8.37□□□□□ -1.07
PTPRM-203ENST00000400060 C5orf67F2Z3F1 127 aa8.37□□□□□ -1.07
PTPRM-203ENST00000400060 H0YJW9 148 aa8.37□□□□□ -1.07
PTPRM-203ENST00000400060 PRKNO60260 465 aaPredicted RBP8.37□□□□□ -1.07
PTPRM-203ENST00000400060 ZXDAP98168 799 aa8.37□□□□□ -1.07
PTPRM-203ENST00000400060 PRSS8Q16651 343 aa8.37□□□□□ -1.07
PTPRM-203ENST00000400060 ZNF585BQ52M93 769 aa8.37□□□□□ -1.07
PTPRM-203ENST00000400060 PCSK4Q6UW60 755 aa8.37□□□□□ -1.07
PTPRM-203ENST00000400060 CACNG8Q8WXS5 425 aa8.37□□□□□ -1.07
PTPRM-203ENST00000400060 SCNM1Q9BWG6 230 aa8.37□□□□□ -1.07
PTPRM-203ENST00000400060 F2RL2O00254 374 aa8.37□□□□□ -1.07
PTPRM-203ENST00000400060 ORM2P19652 201 aa8.37□□□□□ -1.07
PTPRM-203ENST00000400060 ARG2P78540 354 aa8.37□□□□□ -1.07
PTPRM-203ENST00000400060 KLRD1Q13241 179 aa8.37□□□□□ -1.07
PTPRM-203ENST00000400060 OR9G1Q8NH87 305 aa8.37□□□□□ -1.07
PTPRM-203ENST00000400060 CHAC1Q9BUX1 264 aa8.37□□□□□ -1.07
PTPRM-203ENST00000400060 LIME1Q9H400 295 aa8.37□□□□□ -1.07
PTPRM-203ENST00000400060 V9GYV3 84 aa8.37□□□□□ -1.07
PTPRM-203ENST00000400060 EFNB3Q15768 340 aa8.37□□□□□ -1.07
PTPRM-203ENST00000400060 MORN3Q6PF18 240 aaPredicted RBP8.37□□□□□ -1.07
PTPRM-203ENST00000400060 ASCL4Q6XD76 172 aa8.37□□□□□ -1.07
PTPRM-203ENST00000400060 ZIC4Q8N9L1 334 aa8.37□□□□□ -1.07
PTPRM-203ENST00000400060 FLYWCH2Q96CP2 140 aaKnown RBP8.37□□□□□ -1.07
PTPRM-203ENST00000400060 SS18L2Q9UHA2 77 aa8.37□□□□□ -1.07
PTPRM-203ENST00000400060 IGHV3-15A0A0B4J1V0 119 aa8.36□□□□□ -1.07
PTPRM-203ENST00000400060 KLRC4-KLRK1H3BQV0 150 aa8.36□□□□□ -1.07
PTPRM-203ENST00000400060 CXCL13O43927 109 aa8.36□□□□□ -1.07
PTPRM-203ENST00000400060 ASIPP42127 132 aa8.36□□□□□ -1.07
PTPRM-203ENST00000400060 CACNG7P62955 275 aa8.36□□□□□ -1.07
PTPRM-203ENST00000400060 CIARTQ8N365 385 aaPredicted RBP8.36□□□□□ -1.07
PTPRM-203ENST00000400060 SRSF12Q8WXF0 261 aaKnown RBP8.36□□□□□ -1.07
PTPRM-203ENST00000400060 TMEM140Q9NV12 185 aa8.36□□□□□ -1.07
PTPRM-203ENST00000400060 JPT1Q9UK76 154 aa8.36□□□□□ -1.07
PTPRM-203ENST00000400060 TNS1Q9HBL0 1735 aaKnown RBP8.36□□□□□ -1.07
PTPRM-203ENST00000400060 M0R3E3 92 aa8.36□□□□□ -1.07
PTPRM-203ENST00000400060 HOXA4Q00056 320 aaPredicted RBP8.36□□□□□ -1.07
PTPRM-203ENST00000400060 SCRT2Q9NQ03 307 aa8.36□□□□□ -1.07
PTPRM-203ENST00000400060 DOCK4Q8N1I0 1966 aa8.36□□□□□ -1.07
PTPRM-203ENST00000400060 TRPM6Q9BX84 2022 aa8.36□□□□□ -1.07
PTPRM-203ENST00000400060 J3QW42 95 aa8.36□□□□□ -1.07
PTPRM-203ENST00000400060 SAP30O75446 220 aa8.36□□□□□ -1.07
PTPRM-203ENST00000400060 MYF5P13349 255 aa8.36□□□□□ -1.07
PTPRM-203ENST00000400060 GCSAMQ8N6F7 178 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms