RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 HLA-DQA1P01909 254 aa11.56□□□□□ -0.56
VAPA-202ENST00000400000 GLRXP35754 106 aa11.56□□□□□ -0.56
VAPA-202ENST00000400000 HBBP68871 147 aa11.56□□□□□ -0.56
VAPA-202ENST00000400000 NPCDR1Q9BY65 106 aa11.56□□□□□ -0.56
VAPA-202ENST00000400000 A0A087WV48 116 aa11.56□□□□□ -0.56
VAPA-202ENST00000400000 PINLYPA6NC86 204 aa11.56□□□□□ -0.56
VAPA-202ENST00000400000 TNFSF10P50591 281 aa11.56□□□□□ -0.56
VAPA-202ENST00000400000 TCF23Q7RTU1 214 aa11.56□□□□□ -0.56
VAPA-202ENST00000400000 MRPS18AQ9NVS2 196 aaKnown RBP11.56□□□□□ -0.56
VAPA-202ENST00000400000 RAMP3O60896 148 aa11.56□□□□□ -0.56
VAPA-202ENST00000400000 CNTFRP26992 372 aa11.56□□□□□ -0.56
VAPA-202ENST00000400000 LEPP41159 167 aa11.56□□□□□ -0.56
VAPA-202ENST00000400000 RNASE7Q9H1E1 156 aaKnown RBP11.56□□□□□ -0.56
VAPA-202ENST00000400000 ANKRD36A6QL64 1941 aa11.56□□□□□ -0.56
VAPA-202ENST00000400000 CHD5Q8TDI0 1954 aa11.55□□□□□ -0.56
VAPA-202ENST00000400000 WDYHV1Q96HA8 205 aa11.55□□□□□ -0.56
VAPA-202ENST00000400000 IFI27L2Q9H2X8 130 aa11.55□□□□□ -0.56
VAPA-202ENST00000400000 SPRR3Q9UBC9 169 aa11.55□□□□□ -0.56
VAPA-202ENST00000400000 CACNA1IQ9P0X4 2223 aa11.55□□□□□ -0.56
VAPA-202ENST00000400000 CTAG1AP78358 180 aa11.55□□□□□ -0.56
VAPA-202ENST00000400000 PPP1R3EQ9H7J1 279 aa11.55□□□□□ -0.56
VAPA-202ENST00000400000 OR9G4Q8NGQ1 327 aa11.55□□□□□ -0.56
VAPA-202ENST00000400000 THADAQ6YHU6 1953 aa11.55□□□□□ -0.56
VAPA-202ENST00000400000 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.55□□□□□ -0.56
VAPA-202ENST00000400000 LY6HO94772 140 aa11.55□□□□□ -0.56
VAPA-202ENST00000400000 ERVK11-1P61568 191 aa11.55□□□□□ -0.56
VAPA-202ENST00000400000 FOXF2Q12947 444 aa11.55□□□□□ -0.56
VAPA-202ENST00000400000 FAM181AQ8N9Y4 354 aa11.55□□□□□ -0.56
VAPA-202ENST00000400000 TUBGCP6Q96RT7 1819 aa11.55□□□□□ -0.56
VAPA-202ENST00000400000 SAA2-SAA4A0A096LPE2 208 aa11.55□□□□□ -0.56
VAPA-202ENST00000400000 SAA2P0DJI9 122 aaPredicted RBP11.55□□□□□ -0.56
VAPA-202ENST00000400000 STPG2Q8N412 459 aa11.55□□□□□ -0.56
VAPA-202ENST00000400000 TRBV5-7A0A0A0MS05 114 aa11.54□□□□□ -0.56
VAPA-202ENST00000400000 SMIM13P0DJ93 91 aa11.54□□□□□ -0.56
VAPA-202ENST00000400000 OR11H4Q8NGC9 324 aa11.54□□□□□ -0.56
VAPA-202ENST00000400000 OR52E5Q8NH55 327 aa11.54□□□□□ -0.56
VAPA-202ENST00000400000 TMEM167AQ8TBQ9 72 aa11.54□□□□□ -0.56
VAPA-202ENST00000400000 OR10J3Q5JRS4 329 aa11.54□□□□□ -0.56
VAPA-202ENST00000400000 ASCL4Q6XD76 172 aa11.54□□□□□ -0.56
VAPA-202ENST00000400000 GTF3AQ92664 365 aaKnown RBP11.54□□□□□ -0.56
VAPA-202ENST00000400000 PEMTQ9UBM1 199 aa11.54□□□□□ -0.56
VAPA-202ENST00000400000 TRAV21A0A0B4J279 112 aa11.54□□□□□ -0.56
VAPA-202ENST00000400000 CRPP02741 224 aa11.54□□□□□ -0.56
VAPA-202ENST00000400000 NDPQ00604 133 aa11.54□□□□□ -0.56
VAPA-202ENST00000400000 SMIM10L1P0DMW3 83 aa11.54□□□□□ -0.56
VAPA-202ENST00000400000 SMIM10Q96HG1 83 aa11.54□□□□□ -0.56
VAPA-202ENST00000400000 MRPS16Q9Y3D3 137 aaKnown RBP11.54□□□□□ -0.56
VAPA-202ENST00000400000 LSM4Q9Y4Z0 139 aaKnown RBP11.54□□□□□ -0.56
VAPA-202ENST00000400000 SRSF4Q08170 494 aaKnown RBP11.54□□□□□ -0.56
VAPA-202ENST00000400000 C10orf126Q8N4M7 172 aa11.54□□□□□ -0.56
VAPA-202ENST00000400000 NEU4Q8WWR8 484 aaPredicted RBP11.54□□□□□ -0.56
VAPA-202ENST00000400000 FAM169BQ8N8A8 192 aa11.53□□□□□ -0.56
VAPA-202ENST00000400000 LRTM2Q8N967 370 aa11.53□□□□□ -0.56
VAPA-202ENST00000400000 DLEC1Q9Y238 1755 aa11.53□□□□□ -0.56
VAPA-202ENST00000400000 A0A0G2JLM5 398 aa11.53□□□□□ -0.56
VAPA-202ENST00000400000 PLPPR1Q8TBJ4 325 aa11.53□□□□□ -0.56
VAPA-202ENST00000400000 A0A0G2JK05 382 aa11.53□□□□□ -0.56
VAPA-202ENST00000400000 C17orf100A8MU93 164 aa11.53□□□□□ -0.56
VAPA-202ENST00000400000 PYYP10082 97 aa11.53□□□□□ -0.56
VAPA-202ENST00000400000 PSMG4Q5JS54 123 aa11.53□□□□□ -0.56
VAPA-202ENST00000400000 OR10W1Q8NGF6 305 aa11.53□□□□□ -0.56
VAPA-202ENST00000400000 SMIM8Q96KF7 97 aa11.53□□□□□ -0.56
VAPA-202ENST00000400000 ZNF236Q9UL36 1845 aa11.53□□□□□ -0.56
VAPA-202ENST00000400000 PTPRFP10586 1907 aa11.53□□□□□ -0.56
VAPA-202ENST00000400000 KBTBD11-OT1A0A1B0GTJ5 212 aa11.53□□□□□ -0.56
VAPA-202ENST00000400000 C1QTNF9BB2RNN3 333 aa11.53□□□□□ -0.56
VAPA-202ENST00000400000 SMIM6P0DI80 62 aa11.53□□□□□ -0.56
VAPA-202ENST00000400000 GZMBP10144 247 aa11.53□□□□□ -0.56
VAPA-202ENST00000400000 LBHQ53QV2 105 aaPredicted RBP11.53□□□□□ -0.56
VAPA-202ENST00000400000 GATAD1Q8WUU5 269 aa11.53□□□□□ -0.56
VAPA-202ENST00000400000 LINC00862A6NCI5 91 aa11.53□□□□□ -0.56
VAPA-202ENST00000400000 RAB9AP51151 201 aa11.53□□□□□ -0.56
VAPA-202ENST00000400000 RHOGP84095 191 aa11.53□□□□□ -0.56
VAPA-202ENST00000400000 TBR1Q16650 682 aa11.53□□□□□ -0.56
VAPA-202ENST00000400000 DEPPQ9NTK1 212 aa11.53□□□□□ -0.56
VAPA-202ENST00000400000 WISP3O95389 354 aaPredicted RBP11.52□□□□□ -0.56
VAPA-202ENST00000400000 TMEM50AO95807 157 aa11.52□□□□□ -0.56
VAPA-202ENST00000400000 ZIC4Q8N9L1 334 aa11.52□□□□□ -0.56
VAPA-202ENST00000400000 THBDP07204 575 aa11.52□□□□□ -0.56
VAPA-202ENST00000400000 LINC00614P0C842 121 aa11.52□□□□□ -0.56
VAPA-202ENST00000400000 UBE2E2Q96LR5 201 aa11.52□□□□□ -0.56
VAPA-202ENST00000400000 CEP290O15078 2479 aa11.52□□□□□ -0.57
VAPA-202ENST00000400000 RPL15P61313 204 aaKnown RBP11.52□□□□□ -0.57
VAPA-202ENST00000400000 ZXDCQ2QGD7 858 aaPredicted RBP11.52□□□□□ -0.57
VAPA-202ENST00000400000 NMBP08949 121 aa11.52□□□□□ -0.57
VAPA-202ENST00000400000 FER1L6-AS1Q8NA97 138 aa11.52□□□□□ -0.57
VAPA-202ENST00000400000 TRAV2A0A0B4J234 112 aa11.52□□□□□ -0.57
VAPA-202ENST00000400000 OR11H12B2RN74 326 aa11.52□□□□□ -0.57
VAPA-202ENST00000400000 HOXA5P20719 270 aa11.52□□□□□ -0.57
VAPA-202ENST00000400000 LINC01590Q5TEZ4 76 aa11.52□□□□□ -0.57
VAPA-202ENST00000400000 IGFL4Q6B9Z1 124 aa11.52□□□□□ -0.57
VAPA-202ENST00000400000 OR11H1Q8NG94 326 aa11.52□□□□□ -0.57
VAPA-202ENST00000400000 OR11H2Q8NH07 326 aa11.52□□□□□ -0.57
VAPA-202ENST00000400000 RPRMQ9NS64 109 aa11.52□□□□□ -0.57
VAPA-202ENST00000400000 TP53BP1Q12888 1972 aaPredicted RBP11.52□□□□□ -0.57
VAPA-202ENST00000400000 MRPL32Q9BYC8 188 aaKnown RBP11.52□□□□□ -0.57
VAPA-202ENST00000400000 SIPA1L3O60292 1781 aaPredicted RBP11.51□□□□□ -0.57
VAPA-202ENST00000400000 MLNRO43193 412 aa11.51□□□□□ -0.57
VAPA-202ENST00000400000 RNASE6Q93091 150 aaKnown RBP11.51□□□□□ -0.57
VAPA-202ENST00000400000 CHCHD5Q9BSY4 110 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms