RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 PRCDQ00LT1 54 aa19.54■□□□□ 0.72
TSPAN4-207ENST00000397411 ZNF429Q86V71 674 aa19.54■□□□□ 0.72
TSPAN4-207ENST00000397411 LGI3Q8N145 548 aa19.54■□□□□ 0.72
TSPAN4-207ENST00000397411 SLC35G3Q8N808 338 aa19.54■□□□□ 0.72
TSPAN4-207ENST00000397411 IL22RA2Q969J5 263 aa19.54■□□□□ 0.72
TSPAN4-207ENST00000397411 ENY2Q9NPA8 101 aa19.54■□□□□ 0.72
TSPAN4-207ENST00000397411 CTNNBIP1Q9NSA3 81 aaPredicted RBP19.54■□□□□ 0.72
TSPAN4-207ENST00000397411 PRR13Q9NZ81 148 aa19.54■□□□□ 0.72
TSPAN4-207ENST00000397411 TMEM56-RWDD3S4R434 201 aa19.54■□□□□ 0.72
TSPAN4-207ENST00000397411 IGLV11-55A0A075B6I3 123 aa19.53■□□□□ 0.72
TSPAN4-207ENST00000397411 PIGBOS1A0A0B4J2F0 54 aa19.53■□□□□ 0.72
TSPAN4-207ENST00000397411 P0C879 139 aa19.53■□□□□ 0.72
TSPAN4-207ENST00000397411 RPEL1Q2QD12 228 aa19.53■□□□□ 0.72
TSPAN4-207ENST00000397411 SPINK9Q5DT21 86 aa19.53■□□□□ 0.72
TSPAN4-207ENST00000397411 OR1L6Q8NGR2 347 aa19.53■□□□□ 0.72
TSPAN4-207ENST00000397411 CXorf58Q96LI9 332 aa19.53■□□□□ 0.72
TSPAN4-207ENST00000397411 CCDC32Q9BV29 185 aa19.53■□□□□ 0.72
TSPAN4-207ENST00000397411 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP19.52■□□□□ 0.72
TSPAN4-207ENST00000397411 ST8SIA3O43173 380 aa19.52■□□□□ 0.72
TSPAN4-207ENST00000397411 IGHV3-23P01764 117 aa19.52■□□□□ 0.72
TSPAN4-207ENST00000397411 SUPT4H1P63272 117 aaKnown RBP19.52■□□□□ 0.72
TSPAN4-207ENST00000397411 KPRPQ5T749 579 aaPredicted RBP19.52■□□□□ 0.72
TSPAN4-207ENST00000397411 GPR146Q96CH1 333 aa19.52■□□□□ 0.72
TSPAN4-207ENST00000397411 F11RQ9Y624 299 aaKnown RBP19.52■□□□□ 0.72
TSPAN4-207ENST00000397411 S4R3C0 116 aa19.52■□□□□ 0.72
TSPAN4-207ENST00000397411 A0A0G2JRQ6 117 aa19.51■□□□□ 0.71
TSPAN4-207ENST00000397411 NDUFB6O95139 128 aa19.51■□□□□ 0.71
TSPAN4-207ENST00000397411 TRBV12-3P01733 135 aa19.51■□□□□ 0.71
TSPAN4-207ENST00000397411 ELOVL1Q9BW60 279 aa19.51■□□□□ 0.71
TSPAN4-207ENST00000397411 ZMAT5Q9UDW3 170 aaKnown RBP19.51■□□□□ 0.71
TSPAN4-207ENST00000397411 CACNG5Q9UF02 275 aa19.51■□□□□ 0.71
TSPAN4-207ENST00000397411 NOTCH1P46531 2555 aa19.5■□□□□ 0.71
TSPAN4-207ENST00000397411 SNCAP37840 140 aa19.5■□□□□ 0.71
TSPAN4-207ENST00000397411 HOXA1P49639 335 aaPredicted RBP19.5■□□□□ 0.71
TSPAN4-207ENST00000397411 ZNF846Q147U1 533 aa19.5■□□□□ 0.71
TSPAN4-207ENST00000397411 KLK9Q2XQG4 91 aa19.5■□□□□ 0.71
TSPAN4-207ENST00000397411 CLEC19AQ6UXS0 136 aa19.5■□□□□ 0.71
TSPAN4-207ENST00000397411 OR2C3Q8N628 320 aa19.5■□□□□ 0.71
TSPAN4-207ENST00000397411 WDR12Q9GZL7 423 aaKnown RBP19.5■□□□□ 0.71
TSPAN4-207ENST00000397411 KLK9Q9UKQ9 250 aa19.5■□□□□ 0.71
TSPAN4-207ENST00000397411 TRBV7-1A0A0A6YYK4 115 aa19.49■□□□□ 0.71
TSPAN4-207ENST00000397411 LYRM1O43325 122 aa19.49■□□□□ 0.71
TSPAN4-207ENST00000397411 SAP30O75446 220 aa19.49■□□□□ 0.71
TSPAN4-207ENST00000397411 PRB2P02812 416 aaPredicted RBP19.49■□□□□ 0.71
TSPAN4-207ENST00000397411 Q6ZRM9 215 aa19.49■□□□□ 0.71
TSPAN4-207ENST00000397411 OR4C12Q96R67 309 aa19.49■□□□□ 0.71
TSPAN4-207ENST00000397411 A0A0B4J2A0 478 aa19.48■□□□□ 0.71
TSPAN4-207ENST00000397411 SFT2D2O95562 160 aa19.48■□□□□ 0.71
TSPAN4-207ENST00000397411 SULT1A3P0DMM9 295 aa19.48■□□□□ 0.71
TSPAN4-207ENST00000397411 SULT1A4P0DMN0 295 aa19.48■□□□□ 0.71
TSPAN4-207ENST00000397411 SYNJ2BPP57105 145 aa19.48■□□□□ 0.71
TSPAN4-207ENST00000397411 LYZL2Q7Z4W2 148 aa19.48■□□□□ 0.71
TSPAN4-207ENST00000397411 OR1P1Q8NH06 330 aa19.48■□□□□ 0.71
TSPAN4-207ENST00000397411 MISP3Q96FF7 219 aa19.48■□□□□ 0.71
TSPAN4-207ENST00000397411 SHPKQ9UHJ6 478 aa19.48■□□□□ 0.71
TSPAN4-207ENST00000397411 FLVCR2Q9UPI3 526 aa19.48■□□□□ 0.71
TSPAN4-207ENST00000397411 MFSD2BA6NFX1 497 aa19.47■□□□□ 0.71
TSPAN4-207ENST00000397411 PPP5D1E7EU14 171 aa19.47■□□□□ 0.71
TSPAN4-207ENST00000397411 PLA2G10O15496 165 aa19.47■□□□□ 0.71
TSPAN4-207ENST00000397411 GGCTO75223 188 aaKnown RBP19.47■□□□□ 0.71
TSPAN4-207ENST00000397411 ARL3P36405 182 aa19.47■□□□□ 0.71
TSPAN4-207ENST00000397411 INSL3P51460 131 aa19.47■□□□□ 0.71
TSPAN4-207ENST00000397411 SUB1P53999 127 aaKnown RBP eCLIP19.47■□□□□ 0.71
TSPAN4-207ENST00000397411 SPCS3P61009 180 aa19.47■□□□□ 0.71
TSPAN4-207ENST00000397411 UBE2MP61081 183 aaKnown RBP19.47■□□□□ 0.71
TSPAN4-207ENST00000397411 PPP1R1AQ13522 171 aa19.47■□□□□ 0.71
TSPAN4-207ENST00000397411 KLF5Q13887 457 aaPredicted RBP19.47■□□□□ 0.71
TSPAN4-207ENST00000397411 VN1R17PQ8TDU5 208 aa19.47■□□□□ 0.71
TSPAN4-207ENST00000397411 CACFD1Q9UGQ2 172 aa19.47■□□□□ 0.71
TSPAN4-207ENST00000397411 DMRT1Q9Y5R6 373 aa19.47■□□□□ 0.71
TSPAN4-207ENST00000397411 IGHV3-21A0A0B4J1V1 117 aa19.46■□□□□ 0.71
TSPAN4-207ENST00000397411 BMPR1BO00238 502 aa19.46■□□□□ 0.71
TSPAN4-207ENST00000397411 CLEC3BP05452 202 aa19.46■□□□□ 0.71
TSPAN4-207ENST00000397411 REC114Q7Z4M0 266 aa19.46■□□□□ 0.71
TSPAN4-207ENST00000397411 CEBPZOSA8MTT3 80 aa19.45■□□□□ 0.7
TSPAN4-207ENST00000397411 MFAP2P55001 183 aa19.45■□□□□ 0.7
TSPAN4-207ENST00000397411 ACSM6Q6P461 480 aa19.45■□□□□ 0.7
TSPAN4-207ENST00000397411 OR52E5Q8NH55 327 aa19.45■□□□□ 0.7
TSPAN4-207ENST00000397411 DUXBA0A1W2PPF3 345 aa19.44■□□□□ 0.7
TSPAN4-207ENST00000397411 OR2C1O95371 312 aa19.44■□□□□ 0.7
TSPAN4-207ENST00000397411 BTCP35070 178 aa19.44■□□□□ 0.7
TSPAN4-207ENST00000397411 SMCO1Q147U7 214 aa19.44■□□□□ 0.7
TSPAN4-207ENST00000397411 ANKRD55Q3KP44 614 aa19.44■□□□□ 0.7
TSPAN4-207ENST00000397411 C4orf46Q504U0 113 aa19.44■□□□□ 0.7
TSPAN4-207ENST00000397411 MZT2BQ6NZ67 158 aa19.44■□□□□ 0.7
TSPAN4-207ENST00000397411 OR1S1Q8NH92 325 aa19.44■□□□□ 0.7
TSPAN4-207ENST00000397411 ZNF502Q8TBZ5 544 aa19.44■□□□□ 0.7
TSPAN4-207ENST00000397411 CCDC140Q96MF4 163 aa19.44■□□□□ 0.7
TSPAN4-207ENST00000397411 HEYLQ9NQ87 328 aaPredicted RBP19.44■□□□□ 0.7
TSPAN4-207ENST00000397411 PEMTQ9UBM1 199 aa19.44■□□□□ 0.7
TSPAN4-207ENST00000397411 NXPH3O95157 252 aa19.43■□□□□ 0.7
TSPAN4-207ENST00000397411 HLA-AP01891 365 aaKnown RBP19.43■□□□□ 0.7
TSPAN4-207ENST00000397411 GPR183P32249 361 aa19.43■□□□□ 0.7
TSPAN4-207ENST00000397411 KRTAP10-11P60412 298 aa19.43■□□□□ 0.7
TSPAN4-207ENST00000397411 PLET1Q6UQ28 207 aa19.43■□□□□ 0.7
TSPAN4-207ENST00000397411 UBAC2Q8NBM4 344 aa19.43■□□□□ 0.7
TSPAN4-207ENST00000397411 ZNF114Q8NC26 417 aa19.43■□□□□ 0.7
TSPAN4-207ENST00000397411 OR9G4Q8NGQ1 327 aa19.43■□□□□ 0.7
TSPAN4-207ENST00000397411 PINX1Q96BK5 328 aaKnown RBP19.43■□□□□ 0.7
TSPAN4-207ENST00000397411 ZC4H2Q9NQZ6 224 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms