RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 PDCD10Q9BUL8 212 aa16.34■□□□□ 0.21
TSPAN4-206ENST00000397408 PLEKHA3Q9HB20 300 aa16.34■□□□□ 0.21
TSPAN4-206ENST00000397408 KLK9Q9UKQ9 250 aa16.34■□□□□ 0.21
TSPAN4-206ENST00000397408 FLVCR2Q9UPI3 526 aa16.34■□□□□ 0.21
TSPAN4-206ENST00000397408 NDUFB8O95169 186 aa16.33■□□□□ 0.2
TSPAN4-206ENST00000397408 IFNA17P01571 189 aa16.33■□□□□ 0.2
TSPAN4-206ENST00000397408 TRBV12-3P01733 135 aa16.33■□□□□ 0.2
TSPAN4-206ENST00000397408 RANGRFQ9HD47 186 aaPredicted RBP16.33■□□□□ 0.2
TSPAN4-206ENST00000397408 CACNG5Q9UF02 275 aa16.33■□□□□ 0.2
TSPAN4-206ENST00000397408 DMRT1Q9Y5R6 373 aa16.33■□□□□ 0.2
TSPAN4-206ENST00000397408 A0A0B4J2A0 478 aa16.32■□□□□ 0.2
TSPAN4-206ENST00000397408 SFT2D2O95562 160 aa16.32■□□□□ 0.2
TSPAN4-206ENST00000397408 DUS4LO95620 317 aaKnown RBP16.32■□□□□ 0.2
TSPAN4-206ENST00000397408 MCRIP2Q9BUT9 160 aaKnown RBP16.32■□□□□ 0.2
TSPAN4-206ENST00000397408 PEF1Q9UBV8 284 aaKnown RBP16.32■□□□□ 0.2
TSPAN4-206ENST00000397408 SHPKQ9UHJ6 478 aa16.32■□□□□ 0.2
TSPAN4-206ENST00000397408 F11RQ9Y624 299 aaKnown RBP16.32■□□□□ 0.2
TSPAN4-206ENST00000397408 CYB5BO43169 146 aa16.31■□□□□ 0.2
TSPAN4-206ENST00000397408 UBE2MP61081 183 aaKnown RBP16.31■□□□□ 0.2
TSPAN4-206ENST00000397408 ANKRD55Q3KP44 614 aa16.31■□□□□ 0.2
TSPAN4-206ENST00000397408 LYZL2Q7Z4W2 148 aa16.31■□□□□ 0.2
TSPAN4-206ENST00000397408 OR2C3Q8N628 320 aa16.31■□□□□ 0.2
TSPAN4-206ENST00000397408 DCUN1D4Q92564 292 aa16.31■□□□□ 0.2
TSPAN4-206ENST00000397408 S4R3C0 116 aa16.31■□□□□ 0.2
TSPAN4-206ENST00000397408 MEGF8Q7Z7M0 2845 aa16.3■□□□□ 0.2
TSPAN4-206ENST00000397408 IGHV3-23P01764 117 aa16.3■□□□□ 0.2
TSPAN4-206ENST00000397408 ZP3P21754 424 aa16.3■□□□□ 0.2
TSPAN4-206ENST00000397408 HOXD3P31249 432 aaPredicted RBP16.3■□□□□ 0.2
TSPAN4-206ENST00000397408 BEAN1Q3B7T3 259 aa16.3■□□□□ 0.2
TSPAN4-206ENST00000397408 NMSQ5H8A3 153 aa16.3■□□□□ 0.2
TSPAN4-206ENST00000397408 SLC25A24Q6NUK1 477 aa16.3■□□□□ 0.2
TSPAN4-206ENST00000397408 DLX4Q92988 240 aaPredicted RBP16.3■□□□□ 0.2
TSPAN4-206ENST00000397408 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.3■□□□□ 0.2
TSPAN4-206ENST00000397408 THYN1Q9P016 225 aa16.3■□□□□ 0.2
TSPAN4-206ENST00000397408 TBC1D24Q9ULP9 559 aa16.3■□□□□ 0.2
TSPAN4-206ENST00000397408 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.29■□□□□ 0.2
TSPAN4-206ENST00000397408 PIGBOS1A0A0B4J2F0 54 aa16.29■□□□□ 0.2
TSPAN4-206ENST00000397408 MFSD2BA6NFX1 497 aa16.29■□□□□ 0.2
TSPAN4-206ENST00000397408 UPK1BO75841 260 aa16.29■□□□□ 0.2
TSPAN4-206ENST00000397408 HLA-AP01891 365 aaKnown RBP16.29■□□□□ 0.2
TSPAN4-206ENST00000397408 ANXA7P20073 488 aaKnown RBP16.29■□□□□ 0.2
TSPAN4-206ENST00000397408 HOXA1P49639 335 aaPredicted RBP16.29■□□□□ 0.2
TSPAN4-206ENST00000397408 MFAP2P55001 183 aa16.29■□□□□ 0.2
TSPAN4-206ENST00000397408 AARDQ4LEZ3 155 aa16.29■□□□□ 0.2
TSPAN4-206ENST00000397408 EEF1AKMT3Q96AZ1 226 aa16.29■□□□□ 0.2
TSPAN4-206ENST00000397408 GPR61Q9BZJ8 451 aa16.29■□□□□ 0.2
TSPAN4-206ENST00000397408 C20orf85Q9H1P6 137 aa16.29■□□□□ 0.2
TSPAN4-206ENST00000397408 DUXBA0A1W2PPF3 345 aa16.28■□□□□ 0.2
TSPAN4-206ENST00000397408 OVOL1O14753 267 aa16.28■□□□□ 0.2
TSPAN4-206ENST00000397408 SULT1A3P0DMM9 295 aa16.28■□□□□ 0.2
TSPAN4-206ENST00000397408 SULT1A4P0DMN0 295 aa16.28■□□□□ 0.2
TSPAN4-206ENST00000397408 ERHP84090 104 aaKnown RBP16.28■□□□□ 0.2
TSPAN4-206ENST00000397408 LRTM2Q8N967 370 aa16.28■□□□□ 0.2
TSPAN4-206ENST00000397408 OR1P1Q8NH06 330 aa16.28■□□□□ 0.2
TSPAN4-206ENST00000397408 CXorf58Q96LI9 332 aa16.28■□□□□ 0.2
TSPAN4-206ENST00000397408 CCDC140Q96MF4 163 aa16.28■□□□□ 0.2
TSPAN4-206ENST00000397408 C9orf170A2RU37 121 aa16.28■□□□□ 0.2
TSPAN4-206ENST00000397408 SEC14L6B5MCN3 397 aa16.28■□□□□ 0.2
TSPAN4-206ENST00000397408 OR4E1P0C645 316 aa16.28■□□□□ 0.2
TSPAN4-206ENST00000397408 SPCS3P61009 180 aa16.28■□□□□ 0.2
TSPAN4-206ENST00000397408 ASAH1Q13510 395 aa16.28■□□□□ 0.2
TSPAN4-206ENST00000397408 FAM209BQ5JX69 171 aa16.28■□□□□ 0.2
TSPAN4-206ENST00000397408 KPRPQ5T749 579 aaPredicted RBP16.28■□□□□ 0.2
TSPAN4-206ENST00000397408 ZNF114Q8NC26 417 aa16.28■□□□□ 0.2
TSPAN4-206ENST00000397408 OR1L6Q8NGR2 347 aa16.28■□□□□ 0.2
TSPAN4-206ENST00000397408 ENY2Q9NPA8 101 aa16.28■□□□□ 0.2
TSPAN4-206ENST00000397408 BMPR1BO00238 502 aa16.27■□□□□ 0.19
TSPAN4-206ENST00000397408 NXPH3O95157 252 aa16.27■□□□□ 0.19
TSPAN4-206ENST00000397408 TCRBP04435 133 aa16.27■□□□□ 0.19
TSPAN4-206ENST00000397408 DEFA6Q01524 100 aa16.27■□□□□ 0.19
TSPAN4-206ENST00000397408 SMCO1Q147U7 214 aa16.27■□□□□ 0.19
TSPAN4-206ENST00000397408 RPEL1Q2QD12 228 aa16.27■□□□□ 0.19
TSPAN4-206ENST00000397408 C4orf46Q504U0 113 aa16.27■□□□□ 0.19
TSPAN4-206ENST00000397408 MZT2BQ6NZ67 158 aa16.27■□□□□ 0.19
TSPAN4-206ENST00000397408 CLEC19AQ6UXS0 136 aa16.27■□□□□ 0.19
TSPAN4-206ENST00000397408 OR52E5Q8NH55 327 aa16.27■□□□□ 0.19
TSPAN4-206ENST00000397408 TRBV7-1A0A0A6YYK4 115 aa16.26■□□□□ 0.19
TSPAN4-206ENST00000397408 PPP5D1E7EU14 171 aa16.26■□□□□ 0.19
TSPAN4-206ENST00000397408 INS-IGF2F8WCM5 200 aa16.26■□□□□ 0.19
TSPAN4-206ENST00000397408 DHRS2Q13268 280 aa16.26■□□□□ 0.19
TSPAN4-206ENST00000397408 C9orf66Q5T8R8 295 aa16.26■□□□□ 0.19
TSPAN4-206ENST00000397408 LYG2Q86SG7 212 aa16.26■□□□□ 0.19
TSPAN4-206ENST00000397408 NUDT15Q9NV35 164 aa16.26■□□□□ 0.19
TSPAN4-206ENST00000397408 TRAV6A0A075B6T7 132 aa16.25■□□□□ 0.19
TSPAN4-206ENST00000397408 IGHV3-21A0A0B4J1V1 117 aa16.25■□□□□ 0.19
TSPAN4-206ENST00000397408 FAM240BA0A1B0GVZ2 78 aa16.25■□□□□ 0.19
TSPAN4-206ENST00000397408 SNCAP37840 140 aa16.25■□□□□ 0.19
TSPAN4-206ENST00000397408 IFITM3Q01628 133 aa16.25■□□□□ 0.19
TSPAN4-206ENST00000397408 PDLIM3Q53GG5 364 aaPredicted RBP16.25■□□□□ 0.19
TSPAN4-206ENST00000397408 ZNF502Q8TBZ5 544 aa16.25■□□□□ 0.19
TSPAN4-206ENST00000397408 VN1R17PQ8TDU5 208 aa16.25■□□□□ 0.19
TSPAN4-206ENST00000397408 MISP3Q96FF7 219 aa16.25■□□□□ 0.19
TSPAN4-206ENST00000397408 K7EIM0 57 aa16.24■□□□□ 0.19
TSPAN4-206ENST00000397408 HOXB5P09067 269 aa16.24■□□□□ 0.19
TSPAN4-206ENST00000397408 ARL3P36405 182 aa16.24■□□□□ 0.19
TSPAN4-206ENST00000397408 SYNJ2BPP57105 145 aa16.24■□□□□ 0.19
TSPAN4-206ENST00000397408 KLF5Q13887 457 aaPredicted RBP16.24■□□□□ 0.19
TSPAN4-206ENST00000397408 CACFD1Q9UGQ2 172 aa16.24■□□□□ 0.19
TSPAN4-206ENST00000397408 A0A1B0GU03 582 aa16.23■□□□□ 0.19
TSPAN4-206ENST00000397408 CEBPZOSA8MTT3 80 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms