RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 IL15RAQ13261 267 aa18.47■□□□□ 0.55
TSPAN4-203ENST00000397397 AWAT1Q58HT5 328 aa18.47■□□□□ 0.55
TSPAN4-203ENST00000397397 OR5AU1Q8NGC0 362 aa18.47■□□□□ 0.55
TSPAN4-203ENST00000397397 LSM5Q9Y4Y9 91 aaKnown RBP18.47■□□□□ 0.55
TSPAN4-203ENST00000397397 SSSCA1O60232 199 aa18.46■□□□□ 0.55
TSPAN4-203ENST00000397397 IGHG4P01861 327 aa18.46■□□□□ 0.55
TSPAN4-203ENST00000397397 DEFA4P12838 97 aa18.46■□□□□ 0.55
TSPAN4-203ENST00000397397 SNCAP37840 140 aa18.46■□□□□ 0.55
TSPAN4-203ENST00000397397 S100A10P60903 97 aa18.46■□□□□ 0.55
TSPAN4-203ENST00000397397 TEX38Q6PEX7 206 aa18.46■□□□□ 0.55
TSPAN4-203ENST00000397397 ZNF436Q9C0F3 470 aaPredicted RBP18.46■□□□□ 0.55
TSPAN4-203ENST00000397397 K7EPK0 472 aa18.45■□□□□ 0.54
TSPAN4-203ENST00000397397 IGLV1-40P01703 118 aa18.45■□□□□ 0.54
TSPAN4-203ENST00000397397 PRH1P02810 166 aa18.45■□□□□ 0.54
TSPAN4-203ENST00000397397 PF4V1P10720 104 aa18.45■□□□□ 0.54
TSPAN4-203ENST00000397397 SRSF4Q08170 494 aaKnown RBP18.45■□□□□ 0.54
TSPAN4-203ENST00000397397 RAB32Q13637 225 aa18.45■□□□□ 0.54
TSPAN4-203ENST00000397397 WIPF2Q8TF74 440 aaPredicted RBP18.45■□□□□ 0.54
TSPAN4-203ENST00000397397 MS4A10Q96PG2 267 aa18.45■□□□□ 0.54
TSPAN4-203ENST00000397397 RCL1Q9Y2P8 373 aaKnown RBP18.45■□□□□ 0.54
TSPAN4-203ENST00000397397 A0A1B0GVG6 124 aa18.44■□□□□ 0.54
TSPAN4-203ENST00000397397 COMMD1Q8N668 190 aa18.44■□□□□ 0.54
TSPAN4-203ENST00000397397 CIB3Q96Q77 187 aaPredicted RBP18.44■□□□□ 0.54
TSPAN4-203ENST00000397397 P2RX4Q99571 388 aa18.44■□□□□ 0.54
TSPAN4-203ENST00000397397 ZFP57Q9NU63 452 aa18.44■□□□□ 0.54
TSPAN4-203ENST00000397397 F11RQ9Y624 299 aaKnown RBP18.44■□□□□ 0.54
TSPAN4-203ENST00000397397 H3BUA1 57 aa18.43■□□□□ 0.54
TSPAN4-203ENST00000397397 FOXE3Q13461 319 aa18.43■□□□□ 0.54
TSPAN4-203ENST00000397397 LRRC37A5PQ49AS3 106 aa18.43■□□□□ 0.54
TSPAN4-203ENST00000397397 TMEM65Q6PI78 240 aa18.43■□□□□ 0.54
TSPAN4-203ENST00000397397 OR4X2Q8NGF9 303 aa18.43■□□□□ 0.54
TSPAN4-203ENST00000397397 ELANEP08246 267 aa18.42■□□□□ 0.54
TSPAN4-203ENST00000397397 RNASE2P10153 161 aaKnown RBP18.42■□□□□ 0.54
TSPAN4-203ENST00000397397 HTR2BP41595 481 aa18.42■□□□□ 0.54
TSPAN4-203ENST00000397397 SUB1P53999 127 aaKnown RBP eCLIP18.42■□□□□ 0.54
TSPAN4-203ENST00000397397 SLC25A24Q6NUK1 477 aa18.42■□□□□ 0.54
TSPAN4-203ENST00000397397 LCNL1Q6ZST4 164 aa18.42■□□□□ 0.54
TSPAN4-203ENST00000397397 ZNF114Q8NC26 417 aa18.42■□□□□ 0.54
TSPAN4-203ENST00000397397 SLC24A4Q8NFF2 622 aa18.42■□□□□ 0.54
TSPAN4-203ENST00000397397 PPP1R1CQ8WVI7 109 aa18.42■□□□□ 0.54
TSPAN4-203ENST00000397397 RAB40CQ96S21 281 aa18.42■□□□□ 0.54
TSPAN4-203ENST00000397397 KLK15Q9H2R5 256 aa18.42■□□□□ 0.54
TSPAN4-203ENST00000397397 L7N2F9 121 aa18.41■□□□□ 0.54
TSPAN4-203ENST00000397397 CYB5BO43169 146 aa18.41■□□□□ 0.54
TSPAN4-203ENST00000397397 IFNA10P01566 189 aa18.41■□□□□ 0.54
TSPAN4-203ENST00000397397 TRGV3P03979 118 aa18.41■□□□□ 0.54
TSPAN4-203ENST00000397397 GIPP09681 153 aaPredicted RBP18.41■□□□□ 0.54
TSPAN4-203ENST00000397397 PSMB8P28062 276 aa18.41■□□□□ 0.54
TSPAN4-203ENST00000397397 TPPP2P59282 170 aa18.41■□□□□ 0.54
TSPAN4-203ENST00000397397 VAMP2P63027 116 aa18.41■□□□□ 0.54
TSPAN4-203ENST00000397397 OR1L6Q8NGR2 347 aa18.41■□□□□ 0.54
TSPAN4-203ENST00000397397 OR1P1Q8NH06 330 aa18.41■□□□□ 0.54
TSPAN4-203ENST00000397397 CHAC2Q8WUX2 184 aa18.41■□□□□ 0.54
TSPAN4-203ENST00000397397 WFDC12Q8WWY7 111 aa18.41■□□□□ 0.54
TSPAN4-203ENST00000397397 U3KQ87 197 aa18.41■□□□□ 0.54
TSPAN4-203ENST00000397397 BRI3O95415 125 aa18.4■□□□□ 0.54
TSPAN4-203ENST00000397397 LY86O95711 162 aa18.4■□□□□ 0.54
TSPAN4-203ENST00000397397 CD28P10747 220 aa18.4■□□□□ 0.54
TSPAN4-203ENST00000397397 HIST1H1BP16401 226 aaKnown RBP18.4■□□□□ 0.54
TSPAN4-203ENST00000397397 RAB9AP51151 201 aa18.4■□□□□ 0.54
TSPAN4-203ENST00000397397 MFAP2P55001 183 aa18.4■□□□□ 0.54
TSPAN4-203ENST00000397397 BSXQ3C1V8 233 aa18.4■□□□□ 0.54
TSPAN4-203ENST00000397397 C11orf44Q8N8P7 122 aa18.4■□□□□ 0.54
TSPAN4-203ENST00000397397 ASB13Q8WXK3 278 aa18.4■□□□□ 0.54
TSPAN4-203ENST00000397397 SMIM8Q96KF7 97 aa18.4■□□□□ 0.54
TSPAN4-203ENST00000397397 FANCD2OSQ96PS1 177 aa18.4■□□□□ 0.54
TSPAN4-203ENST00000397397 SLA2Q9H6Q3 261 aa18.4■□□□□ 0.54
TSPAN4-203ENST00000397397 PSENENQ9NZ42 101 aa18.4■□□□□ 0.54
TSPAN4-203ENST00000397397 DMRT1Q9Y5R6 373 aa18.4■□□□□ 0.54
TSPAN4-203ENST00000397397 IGLV11-55A0A075B6I3 123 aa18.4■□□□□ 0.54
TSPAN4-203ENST00000397397 OR2J3O76001 311 aa18.4■□□□□ 0.54
TSPAN4-203ENST00000397397 RLN2P04090 185 aa18.4■□□□□ 0.54
TSPAN4-203ENST00000397397 RPLP1P05386 114 aaKnown RBP18.4■□□□□ 0.54
TSPAN4-203ENST00000397397 PVALBP20472 110 aaPredicted RBP18.4■□□□□ 0.54
TSPAN4-203ENST00000397397 NPY1RP25929 384 aa18.4■□□□□ 0.54
TSPAN4-203ENST00000397397 KRTAP10-3P60369 221 aa18.4■□□□□ 0.54
TSPAN4-203ENST00000397397 CD83Q01151 205 aa18.4■□□□□ 0.54
TSPAN4-203ENST00000397397 DEFA5Q01523 94 aa18.4■□□□□ 0.54
TSPAN4-203ENST00000397397 SPANXN5Q5MJ07 72 aa18.4■□□□□ 0.54
TSPAN4-203ENST00000397397 H3BP45 60 aa18.39■□□□□ 0.53
TSPAN4-203ENST00000397397 TMEM50AO95807 157 aa18.39■□□□□ 0.53
TSPAN4-203ENST00000397397 PAX9P55771 341 aa18.39■□□□□ 0.53
TSPAN4-203ENST00000397397 RAP2BP61225 183 aa18.39■□□□□ 0.53
TSPAN4-203ENST00000397397 RPL23AP62750 156 aaKnown RBP18.39■□□□□ 0.53
TSPAN4-203ENST00000397397 RPP30P78346 268 aaKnown RBP18.39■□□□□ 0.53
TSPAN4-203ENST00000397397 RHOGP84095 191 aa18.39■□□□□ 0.53
TSPAN4-203ENST00000397397 C2orf83Q53S99 150 aa18.39■□□□□ 0.53
TSPAN4-203ENST00000397397 TCTEX1D4Q5JR98 221 aa18.39■□□□□ 0.53
TSPAN4-203ENST00000397397 RNF152Q8N8N0 203 aa18.39■□□□□ 0.53
TSPAN4-203ENST00000397397 PAIP2BQ9ULR5 123 aaKnown RBP18.39■□□□□ 0.53
TSPAN4-203ENST00000397397 TRBV9A0A0B4J1U6 114 aa18.38■□□□□ 0.53
TSPAN4-203ENST00000397397 DEDDO75618 318 aa18.38■□□□□ 0.53
TSPAN4-203ENST00000397397 MPC2O95563 127 aa18.38■□□□□ 0.53
TSPAN4-203ENST00000397397 BCAP31P51572 246 aa18.38■□□□□ 0.53
TSPAN4-203ENST00000397397 TAS2R30P59541 319 aa18.38■□□□□ 0.53
TSPAN4-203ENST00000397397 KLK9Q2XQG4 91 aa18.38■□□□□ 0.53
TSPAN4-203ENST00000397397 C12orf54Q6X4T0 127 aa18.38■□□□□ 0.53
TSPAN4-203ENST00000397397 NOXA1Q86UR1 476 aa18.38■□□□□ 0.53
TSPAN4-203ENST00000397397 MISP3Q96FF7 219 aa18.38■□□□□ 0.53
TSPAN4-203ENST00000397397 FBXL7Q9UJT9 491 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms