RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 GFRA3O60609 400 aa7.57□□□□□ -1.2
CAPN3-206ENST00000397163 NUDT3O95989 172 aa7.57□□□□□ -1.2
CAPN3-206ENST00000397163 IGHV3-13P01766 116 aa7.57□□□□□ -1.2
CAPN3-206ENST00000397163 IGHV3-7P01780 117 aa7.57□□□□□ -1.2
CAPN3-206ENST00000397163 CD46P15529 392 aa7.57□□□□□ -1.2
CAPN3-206ENST00000397163 GATA2P23769 480 aaPredicted RBP7.57□□□□□ -1.2
CAPN3-206ENST00000397163 DUTP33316 252 aaKnown RBP7.57□□□□□ -1.2
CAPN3-206ENST00000397163 RAB31Q13636 194 aa7.57□□□□□ -1.2
CAPN3-206ENST00000397163 PMCHL1Q16048 86 aa7.57□□□□□ -1.2
CAPN3-206ENST00000397163 WDR73Q6P4I2 378 aa7.57□□□□□ -1.2
CAPN3-206ENST00000397163 PQLC2Q6ZP29 291 aa7.57□□□□□ -1.2
CAPN3-206ENST00000397163 LINC00696Q6ZRV3 163 aa7.57□□□□□ -1.2
CAPN3-206ENST00000397163 SPATA12Q7Z6I5 190 aa7.57□□□□□ -1.2
CAPN3-206ENST00000397163 KIR3DL3Q8N743 410 aa7.57□□□□□ -1.2
CAPN3-206ENST00000397163 CHTOPQ9Y3Y2 248 aaKnown RBP7.57□□□□□ -1.2
CAPN3-206ENST00000397163 TRAV3A0A0B4J244 114 aa7.57□□□□□ -1.2
CAPN3-206ENST00000397163 HELTA6NFD8 242 aa7.57□□□□□ -1.2
CAPN3-206ENST00000397163 CA1P00915 261 aaPredicted RBP7.57□□□□□ -1.2
CAPN3-206ENST00000397163 CRYBB3P26998 211 aa7.57□□□□□ -1.2
CAPN3-206ENST00000397163 VDAC2P45880 294 aaPredicted RBP7.57□□□□□ -1.2
CAPN3-206ENST00000397163 GABRA6Q16445 453 aa7.57□□□□□ -1.2
CAPN3-206ENST00000397163 TEPPQ6URK8 271 aa7.57□□□□□ -1.2
CAPN3-206ENST00000397163 C6orf15Q6UXA7 325 aaPredicted RBP7.57□□□□□ -1.2
CAPN3-206ENST00000397163 LHFPL4Q7Z7J7 247 aa7.57□□□□□ -1.2
CAPN3-206ENST00000397163 OR2D3Q8NGH3 330 aa7.57□□□□□ -1.2
CAPN3-206ENST00000397163 C11orf52Q96A22 123 aa7.57□□□□□ -1.2
CAPN3-206ENST00000397163 SFXN3Q9BWM7 321 aa7.57□□□□□ -1.2
CAPN3-206ENST00000397163 RNASE7Q9H1E1 156 aaKnown RBP7.57□□□□□ -1.2
CAPN3-206ENST00000397163 NCOR1P1Q9H4R4 102 aa7.57□□□□□ -1.2
CAPN3-206ENST00000397163 HEATR1Q9H583 2144 aaKnown RBP7.57□□□□□ -1.2
CAPN3-206ENST00000397163 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.57□□□□□ -1.2
CAPN3-206ENST00000397163 MT-ND6P03923 174 aa7.57□□□□□ -1.2
CAPN3-206ENST00000397163 CA7P43166 264 aa7.57□□□□□ -1.2
CAPN3-206ENST00000397163 PRRX1P54821 245 aa7.57□□□□□ -1.2
CAPN3-206ENST00000397163 PSG5Q15238 335 aa7.57□□□□□ -1.2
CAPN3-206ENST00000397163 TSKUQ8WUA8 353 aa7.57□□□□□ -1.2
CAPN3-206ENST00000397163 HES4Q9HCC6 221 aa7.57□□□□□ -1.2
CAPN3-206ENST00000397163 GCM1Q9NP62 436 aa7.57□□□□□ -1.2
CAPN3-206ENST00000397163 SERTAD4Q9NUC0 356 aa7.57□□□□□ -1.2
CAPN3-206ENST00000397163 CLEC5AQ9NY25 188 aa7.57□□□□□ -1.2
CAPN3-206ENST00000397163 PILRBQ9UKJ0 227 aa7.57□□□□□ -1.2
CAPN3-206ENST00000397163 TCF19Q9Y242 345 aa7.57□□□□□ -1.2
CAPN3-206ENST00000397163 TIMM8BQ9Y5J9 83 aaPredicted RBP7.57□□□□□ -1.2
CAPN3-206ENST00000397163 LY96Q9Y6Y9 160 aa7.57□□□□□ -1.2
CAPN3-206ENST00000397163 PATE3B3GLJ2 98 aa7.56□□□□□ -1.2
CAPN3-206ENST00000397163 HSBP1L1C9JCN9 74 aa7.56□□□□□ -1.2
CAPN3-206ENST00000397163 MPV17P39210 176 aa7.56□□□□□ -1.2
CAPN3-206ENST00000397163 TIGITQ495A1 244 aa7.56□□□□□ -1.2
CAPN3-206ENST00000397163 ACP7Q6ZNF0 438 aa7.56□□□□□ -1.2
CAPN3-206ENST00000397163 HINT2Q9BX68 163 aa7.56□□□□□ -1.2
CAPN3-206ENST00000397163 TMEM140Q9NV12 185 aa7.56□□□□□ -1.2
CAPN3-206ENST00000397163 MRPS16Q9Y3D3 137 aaKnown RBP7.56□□□□□ -1.2
CAPN3-206ENST00000397163 CACNA1HO95180 2353 aa7.56□□□□□ -1.2
CAPN3-206ENST00000397163 DOCK10Q96BY6 2186 aa7.56□□□□□ -1.2
CAPN3-206ENST00000397163 hDV102S1A0JD36 115 aa7.56□□□□□ -1.2
CAPN3-206ENST00000397163 SH2D7A6NKC9 451 aaPredicted RBP7.56□□□□□ -1.2
CAPN3-206ENST00000397163 IQCF6A8MYZ5 107 aa7.56□□□□□ -1.2
CAPN3-206ENST00000397163 PRSS46E5RG02 174 aa7.56□□□□□ -1.2
CAPN3-206ENST00000397163 SNAI2O43623 268 aa7.56□□□□□ -1.2
CAPN3-206ENST00000397163 MGST1P10620 155 aaKnown RBP7.56□□□□□ -1.2
CAPN3-206ENST00000397163 TMPRSS3P57727 454 aa7.56□□□□□ -1.2
CAPN3-206ENST00000397163 CX3CL1P78423 397 aa7.56□□□□□ -1.2
CAPN3-206ENST00000397163 PSG9Q00887 426 aa7.56□□□□□ -1.2
CAPN3-206ENST00000397163 OR10J3Q5JRS4 329 aa7.56□□□□□ -1.2
CAPN3-206ENST00000397163 MIR17HGQ75NE6 70 aa7.56□□□□□ -1.2
CAPN3-206ENST00000397163 SLC24A4Q8NFF2 622 aa7.56□□□□□ -1.2
CAPN3-206ENST00000397163 Q8TCH9 128 aa7.56□□□□□ -1.2
CAPN3-206ENST00000397163 S1PR3Q99500 378 aa7.56□□□□□ -1.2
CAPN3-206ENST00000397163 ABI3Q9P2A4 366 aa7.56□□□□□ -1.2
CAPN3-206ENST00000397163 CLCF1Q9UBD9 225 aa7.56□□□□□ -1.2
CAPN3-206ENST00000397163 LSM4Q9Y4Z0 139 aaKnown RBP7.56□□□□□ -1.2
CAPN3-206ENST00000397163 ARL2-SNX15V9GYD0 113 aa7.56□□□□□ -1.2
CAPN3-206ENST00000397163 TRAV8-6A0A0B4J262 113 aa7.56□□□□□ -1.2
CAPN3-206ENST00000397163 K7ERU9 68 aa7.56□□□□□ -1.2
CAPN3-206ENST00000397163 PROP1O75360 226 aa7.56□□□□□ -1.2
CAPN3-206ENST00000397163 ADH4P08319 380 aa7.56□□□□□ -1.2
CAPN3-206ENST00000397163 NPY1RP25929 384 aa7.56□□□□□ -1.2
CAPN3-206ENST00000397163 PPOXP50336 477 aa7.56□□□□□ -1.2
CAPN3-206ENST00000397163 RPL39P5Q59GN2 51 aa7.56□□□□□ -1.2
CAPN3-206ENST00000397163 PMS2CLQ68D20 193 aa7.56□□□□□ -1.2
CAPN3-206ENST00000397163 EBLN2Q6P2I7 272 aa7.56□□□□□ -1.2
CAPN3-206ENST00000397163 TMEM136Q6ZRR5 245 aa7.56□□□□□ -1.2
CAPN3-206ENST00000397163 MUC15Q8N387 334 aa7.56□□□□□ -1.2
CAPN3-206ENST00000397163 OR52E5Q8NH55 327 aa7.56□□□□□ -1.2
CAPN3-206ENST00000397163 KLF14Q8TD94 323 aaPredicted RBP7.56□□□□□ -1.2
CAPN3-206ENST00000397163 ENY2Q9NPA8 101 aa7.56□□□□□ -1.2
CAPN3-206ENST00000397163 GNG7O60262 68 aa7.55□□□□□ -1.2
CAPN3-206ENST00000397163 WISP2O76076 250 aa7.55□□□□□ -1.2
CAPN3-206ENST00000397163 IGFBP2P18065 325 aa7.55□□□□□ -1.2
CAPN3-206ENST00000397163 C1orf159Q96HA4 380 aa7.55□□□□□ -1.2
CAPN3-206ENST00000397163 PLEKHA3Q9HB20 300 aa7.55□□□□□ -1.2
CAPN3-206ENST00000397163 FAM90A9PA6NNJ1 464 aa7.55□□□□□ -1.2
CAPN3-206ENST00000397163 BMPR1BO00238 502 aa7.55□□□□□ -1.2
CAPN3-206ENST00000397163 LYZL6O75951 148 aa7.55□□□□□ -1.2
CAPN3-206ENST00000397163 SP9P0CG40 484 aa7.55□□□□□ -1.2
CAPN3-206ENST00000397163 GPR6P46095 362 aaPredicted RBP7.55□□□□□ -1.2
CAPN3-206ENST00000397163 TNXAQ16473 311 aa7.55□□□□□ -1.2
CAPN3-206ENST00000397163 RNASEKQ6P5S7 137 aaKnown RBP7.55□□□□□ -1.2
CAPN3-206ENST00000397163 C11orf53Q8IXP5 236 aa7.55□□□□□ -1.2
CAPN3-206ENST00000397163 NHLRC2Q8NBF2 726 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms