RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 SNCAP37840 140 aa10.79□□□□□ -0.68
MCF2L-209ENST00000397036 IER3P46695 156 aa10.79□□□□□ -0.68
MCF2L-209ENST00000397036 WT1-ASQ06250 92 aa10.79□□□□□ -0.68
MCF2L-209ENST00000397036 ARL16Q0P5N6 197 aa10.79□□□□□ -0.68
MCF2L-209ENST00000397036 VWC2Q2TAL6 325 aa10.79□□□□□ -0.68
MCF2L-209ENST00000397036 C10orf55Q5SWW7 151 aa10.79□□□□□ -0.68
MCF2L-209ENST00000397036 ETV3LQ6ZN32 361 aa10.79□□□□□ -0.68
MCF2L-209ENST00000397036 ZNF767PQ75MW2 155 aa10.79□□□□□ -0.68
MCF2L-209ENST00000397036 BCL6BQ8N143 479 aaPredicted RBP10.79□□□□□ -0.68
MCF2L-209ENST00000397036 C5orf56Q8N8D9 126 aa10.79□□□□□ -0.68
MCF2L-209ENST00000397036 OR10W1Q8NGF6 305 aa10.79□□□□□ -0.68
MCF2L-209ENST00000397036 ST8SIA2Q92186 375 aa10.79□□□□□ -0.68
MCF2L-209ENST00000397036 TMEM68Q96MH6 324 aa10.79□□□□□ -0.68
MCF2L-209ENST00000397036 ATP5SQ99766 215 aa10.79□□□□□ -0.68
MCF2L-209ENST00000397036 SOX21Q9Y651 276 aaPredicted RBP10.79□□□□□ -0.68
MCF2L-209ENST00000397036 AKAP9Q99996 3911 aa10.79□□□□□ -0.68
MCF2L-209ENST00000397036 IGHV7-81A0A0B4J1V7 117 aa10.79□□□□□ -0.68
MCF2L-209ENST00000397036 PRSS46E5RG02 174 aa10.79□□□□□ -0.68
MCF2L-209ENST00000397036 H3BUX3 64 aa10.79□□□□□ -0.68
MCF2L-209ENST00000397036 CNIH1O95406 144 aa10.79□□□□□ -0.68
MCF2L-209ENST00000397036 IFNA7P01567 189 aa10.79□□□□□ -0.68
MCF2L-209ENST00000397036 OR13C7P0DN81 318 aa10.79□□□□□ -0.68
MCF2L-209ENST00000397036 SLC38A11Q08AI6 406 aa10.79□□□□□ -0.68
MCF2L-209ENST00000397036 TMEM267Q0VDI3 215 aaPredicted RBP10.79□□□□□ -0.68
MCF2L-209ENST00000397036 RPL7L1Q6DKI1 246 aaKnown RBP10.79□□□□□ -0.68
MCF2L-209ENST00000397036 ZNF680Q8NEM1 530 aa10.79□□□□□ -0.68
MCF2L-209ENST00000397036 OR1L6Q8NGR2 347 aa10.79□□□□□ -0.68
MCF2L-209ENST00000397036 RNASEH2CQ8TDP1 164 aaKnown RBP10.79□□□□□ -0.68
MCF2L-209ENST00000397036 CACNG8Q8WXS5 425 aa10.79□□□□□ -0.68
MCF2L-209ENST00000397036 SONP18583 2426 aaKnown RBP10.78□□□□□ -0.68
MCF2L-209ENST00000397036 CRYGCP07315 174 aa10.78□□□□□ -0.68
MCF2L-209ENST00000397036 GPX4P36969 197 aaPredicted RBP10.78□□□□□ -0.68
MCF2L-209ENST00000397036 CRIP2P52943 208 aaPredicted RBP10.78□□□□□ -0.68
MCF2L-209ENST00000397036 DLK1P80370 383 aa10.78□□□□□ -0.68
MCF2L-209ENST00000397036 KLK9Q2XQG4 91 aa10.78□□□□□ -0.68
MCF2L-209ENST00000397036 EIF5AL1Q6IS14 154 aaKnown RBP10.78□□□□□ -0.68
MCF2L-209ENST00000397036 CLEC9AQ6UXN8 241 aa10.78□□□□□ -0.68
MCF2L-209ENST00000397036 TMEM86BQ8N661 226 aa10.78□□□□□ -0.68
MCF2L-209ENST00000397036 TMEM217Q8N7C4 229 aa10.78□□□□□ -0.68
MCF2L-209ENST00000397036 OR1P1Q8NH06 330 aa10.78□□□□□ -0.68
MCF2L-209ENST00000397036 SSMEM1Q8WWF3 244 aa10.78□□□□□ -0.68
MCF2L-209ENST00000397036 ARPC1AQ92747 370 aa10.78□□□□□ -0.68
MCF2L-209ENST00000397036 P2RX4Q99571 388 aa10.78□□□□□ -0.68
MCF2L-209ENST00000397036 GINS3Q9BRX5 216 aa10.78□□□□□ -0.68
MCF2L-209ENST00000397036 TMEM147Q9BVK8 224 aa10.78□□□□□ -0.68
MCF2L-209ENST00000397036 KLK9Q9UKQ9 250 aa10.78□□□□□ -0.68
MCF2L-209ENST00000397036 NPIPB5A8MRT5 1133 aa10.77□□□□□ -0.69
MCF2L-209ENST00000397036 CFDP00746 253 aaPredicted RBP10.77□□□□□ -0.69
MCF2L-209ENST00000397036 AMY1AP04745 511 aa10.77□□□□□ -0.69
MCF2L-209ENST00000397036 IFNA4P05014 189 aa10.77□□□□□ -0.69
MCF2L-209ENST00000397036 CTRB1P17538 263 aa10.77□□□□□ -0.69
MCF2L-209ENST00000397036 HNF1AP20823 631 aa10.77□□□□□ -0.69
MCF2L-209ENST00000397036 GNB1P62873 340 aa10.77□□□□□ -0.69
MCF2L-209ENST00000397036 CTRB2Q6GPI1 263 aa10.77□□□□□ -0.69
MCF2L-209ENST00000397036 SGMS2Q8NHU3 365 aa10.77□□□□□ -0.69
MCF2L-209ENST00000397036 TMUB1Q9BVT8 246 aa10.77□□□□□ -0.69
MCF2L-209ENST00000397036 SMIM3Q9BZL3 60 aa10.77□□□□□ -0.69
MCF2L-209ENST00000397036 ZNF469Q96JG9 3925 aaPredicted RBP10.77□□□□□ -0.69
MCF2L-209ENST00000397036 SVEP1Q4LDE5 3571 aa10.76□□□□□ -0.69
MCF2L-209ENST00000397036 BTBD17A6NE02 478 aa10.76□□□□□ -0.69
MCF2L-209ENST00000397036 CORTO00230 105 aa10.76□□□□□ -0.69
MCF2L-209ENST00000397036 IFNA5P01569 189 aa10.76□□□□□ -0.69
MCF2L-209ENST00000397036 EGR2P11161 476 aaPredicted RBP10.76□□□□□ -0.69
MCF2L-209ENST00000397036 MDKP21741 143 aaPredicted RBP10.76□□□□□ -0.69
MCF2L-209ENST00000397036 SCGB2A2Q13296 93 aa10.76□□□□□ -0.69
MCF2L-209ENST00000397036 CLINT1Q14677 625 aa10.76□□□□□ -0.69
MCF2L-209ENST00000397036 OR8G2PQ6IF36 304 aa10.76□□□□□ -0.69
MCF2L-209ENST00000397036 LILRB2Q8N423 598 aa10.76□□□□□ -0.69
MCF2L-209ENST00000397036 TTC9CQ8N5M4 171 aa10.76□□□□□ -0.69
MCF2L-209ENST00000397036 ZNF48Q96MX3 618 aaPredicted RBP10.76□□□□□ -0.69
MCF2L-209ENST00000397036 YAE1D1Q9NRH1 226 aa10.76□□□□□ -0.69
MCF2L-209ENST00000397036 UQCC1Q9NVA1 299 aa10.76□□□□□ -0.69
MCF2L-209ENST00000397036 ZNF580Q9UK33 172 aa10.76□□□□□ -0.69
MCF2L-209ENST00000397036 PAIP2BQ9ULR5 123 aaKnown RBP10.76□□□□□ -0.69
MCF2L-209ENST00000397036 F11RQ9Y624 299 aaKnown RBP10.76□□□□□ -0.69
MCF2L-209ENST00000397036 BAHCC1Q9P281 2608 aa10.76□□□□□ -0.69
MCF2L-209ENST00000397036 HIVEP2P31629 2446 aa10.75□□□□□ -0.69
MCF2L-209ENST00000397036 SEC11BP0C7V7 166 aa10.75□□□□□ -0.69
MCF2L-209ENST00000397036 AREGP15514 252 aa10.75□□□□□ -0.69
MCF2L-209ENST00000397036 SRP14P37108 136 aaKnown RBP10.75□□□□□ -0.69
MCF2L-209ENST00000397036 NDPQ00604 133 aa10.75□□□□□ -0.69
MCF2L-209ENST00000397036 AKIRIN2Q53H80 203 aa10.75□□□□□ -0.69
MCF2L-209ENST00000397036 CENPVQ7Z7K6 275 aaPredicted RBP10.75□□□□□ -0.69
MCF2L-209ENST00000397036 SCARB1Q8WTV0 552 aa10.75□□□□□ -0.69
MCF2L-209ENST00000397036 GNPNAT1Q96EK6 184 aaPredicted RBP10.75□□□□□ -0.69
MCF2L-209ENST00000397036 MDFIC2A0A1B0GVS7 189 aa10.74□□□□□ -0.69
MCF2L-209ENST00000397036 MPDU1O75352 247 aa10.74□□□□□ -0.69
MCF2L-209ENST00000397036 IGHV4-59P01825 116 aa10.74□□□□□ -0.69
MCF2L-209ENST00000397036 IGHG2P01859 326 aa10.74□□□□□ -0.69
MCF2L-209ENST00000397036 IGF1P05019 195 aa10.74□□□□□ -0.69
MCF2L-209ENST00000397036 SPP1P10451 314 aa10.74□□□□□ -0.69
MCF2L-209ENST00000397036 CD69Q07108 199 aa10.74□□□□□ -0.69
MCF2L-209ENST00000397036 EXOSC2Q13868 293 aaKnown RBP10.74□□□□□ -0.69
MCF2L-209ENST00000397036 TMEM219Q86XT9 240 aa10.74□□□□□ -0.69
MCF2L-209ENST00000397036 C22orf15Q8WYQ4 148 aa10.74□□□□□ -0.69
MCF2L-209ENST00000397036 HSPB9Q9BQS6 159 aa10.74□□□□□ -0.69
MCF2L-209ENST00000397036 WDR61Q9GZS3 305 aaKnown RBP10.74□□□□□ -0.69
MCF2L-209ENST00000397036 UBQLN2Q9UHD9 624 aa10.74□□□□□ -0.69
MCF2L-209ENST00000397036 VPREB3Q9UKI3 123 aa10.74□□□□□ -0.69
MCF2L-209ENST00000397036 CYB5BO43169 146 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms