RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 ARL2-SNX15V9GYD0 113 aa8.14□□□□□ -1.11
TRIM39-203ENST00000396547 HCFC1P51610 2035 aa8.13□□□□□ -1.11
TRIM39-203ENST00000396547 RIF1Q5UIP0 2472 aaKnown RBP8.13□□□□□ -1.11
TRIM39-203ENST00000396547 A0A1W2PN81 502 aa8.13□□□□□ -1.11
TRIM39-203ENST00000396547 OOEPA6NGQ2 149 aa8.13□□□□□ -1.11
TRIM39-203ENST00000396547 SH2D7A6NKC9 451 aaPredicted RBP8.13□□□□□ -1.11
TRIM39-203ENST00000396547 LYZL6O75951 148 aa8.13□□□□□ -1.11
TRIM39-203ENST00000396547 P0C879 139 aa8.13□□□□□ -1.11
TRIM39-203ENST00000396547 PRRX1P54821 245 aa8.13□□□□□ -1.11
TRIM39-203ENST00000396547 RBX1P62877 108 aa8.13□□□□□ -1.11
TRIM39-203ENST00000396547 TNXAQ16473 311 aa8.13□□□□□ -1.11
TRIM39-203ENST00000396547 TMEM136Q6ZRR5 245 aa8.13□□□□□ -1.11
TRIM39-203ENST00000396547 NIT1Q86X76 327 aa8.13□□□□□ -1.11
TRIM39-203ENST00000396547 DEFB124Q8NES8 71 aa8.13□□□□□ -1.11
TRIM39-203ENST00000396547 COQ2Q96H96 371 aa8.13□□□□□ -1.11
TRIM39-203ENST00000396547 BOKQ9UMX3 212 aaPredicted RBP8.13□□□□□ -1.11
TRIM39-203ENST00000396547 RPH3ALQ9UNE2 315 aa8.13□□□□□ -1.11
TRIM39-203ENST00000396547 GVINP1Q7Z2Y8 2422 aa8.13□□□□□ -1.11
TRIM39-203ENST00000396547 NKX6-3A6NJ46 265 aa8.13□□□□□ -1.11
TRIM39-203ENST00000396547 SMPD2O60906 423 aa8.13□□□□□ -1.11
TRIM39-203ENST00000396547 IGHV3-48P01763 117 aa8.13□□□□□ -1.11
TRIM39-203ENST00000396547 CTRLP40313 264 aa8.13□□□□□ -1.11
TRIM39-203ENST00000396547 MFAP2P55001 183 aa8.13□□□□□ -1.11
TRIM39-203ENST00000396547 RPL8P62917 257 aaKnown RBP8.13□□□□□ -1.11
TRIM39-203ENST00000396547 ARG2P78540 354 aa8.13□□□□□ -1.11
TRIM39-203ENST00000396547 RPL19P84098 196 aaKnown RBP8.13□□□□□ -1.11
TRIM39-203ENST00000396547 VWC2Q2TAL6 325 aa8.13□□□□□ -1.11
TRIM39-203ENST00000396547 IBA57Q5T440 356 aaKnown RBP8.13□□□□□ -1.11
TRIM39-203ENST00000396547 ZC2HC1AQ96GY0 325 aa8.13□□□□□ -1.11
TRIM39-203ENST00000396547 GNB1LQ9BYB4 327 aa8.13□□□□□ -1.11
TRIM39-203ENST00000396547 NPVFQ9HCQ7 196 aa8.13□□□□□ -1.11
TRIM39-203ENST00000396547 ENY2Q9NPA8 101 aa8.13□□□□□ -1.11
TRIM39-203ENST00000396547 AGFG2O95081 481 aa8.12□□□□□ -1.11
TRIM39-203ENST00000396547 ROS1P08922 2347 aa8.12□□□□□ -1.11
TRIM39-203ENST00000396547 CLDN18P56856 261 aa8.12□□□□□ -1.11
TRIM39-203ENST00000396547 SLAQ13239 276 aa8.12□□□□□ -1.11
TRIM39-203ENST00000396547 UBE2V1Q13404 147 aa8.12□□□□□ -1.11
TRIM39-203ENST00000396547 RAB31Q13636 194 aa8.12□□□□□ -1.11
TRIM39-203ENST00000396547 IL11RAQ14626 422 aa8.12□□□□□ -1.11
TRIM39-203ENST00000396547 TBC1D28Q2M2D7 210 aa8.12□□□□□ -1.11
TRIM39-203ENST00000396547 TRAT1Q6PIZ9 186 aa8.12□□□□□ -1.11
TRIM39-203ENST00000396547 TEPPQ6URK8 271 aa8.12□□□□□ -1.11
TRIM39-203ENST00000396547 PPP1R32Q7Z5V6 425 aa8.12□□□□□ -1.11
TRIM39-203ENST00000396547 ZBTB34Q8NCN2 500 aa8.12□□□□□ -1.11
TRIM39-203ENST00000396547 ZNF355PQ9NSJ1 428 aa8.12□□□□□ -1.11
TRIM39-203ENST00000396547 MPV17P39210 176 aa8.12□□□□□ -1.11
TRIM39-203ENST00000396547 KLF3P57682 345 aaPredicted RBP8.12□□□□□ -1.11
TRIM39-203ENST00000396547 DCAF12Q5T6F0 453 aa8.12□□□□□ -1.11
TRIM39-203ENST00000396547 LHFPL4Q7Z7J7 247 aa8.12□□□□□ -1.11
TRIM39-203ENST00000396547 SFXN3Q9BWM7 321 aa8.12□□□□□ -1.11
TRIM39-203ENST00000396547 TCF19Q9Y242 345 aa8.12□□□□□ -1.11
TRIM39-203ENST00000396547 COX11Q9Y6N1 276 aa8.12□□□□□ -1.11
TRIM39-203ENST00000396547 LOC400499M0QZD8 3231 aa8.12□□□□□ -1.11
TRIM39-203ENST00000396547 SPINT2O43291 252 aa8.12□□□□□ -1.11
TRIM39-203ENST00000396547 PRB4P10163 310 aaPredicted RBP8.12□□□□□ -1.11
TRIM39-203ENST00000396547 CD46P15529 392 aa8.12□□□□□ -1.11
TRIM39-203ENST00000396547 FBLN7Q53RD9 439 aa8.12□□□□□ -1.11
TRIM39-203ENST00000396547 UTF1Q5T230 341 aa8.12□□□□□ -1.11
TRIM39-203ENST00000396547 C1orf185Q5T7R7 199 aa8.12□□□□□ -1.11
TRIM39-203ENST00000396547 KIR3DL3Q8N743 410 aa8.12□□□□□ -1.11
TRIM39-203ENST00000396547 ZNF596Q8TC21 504 aa8.12□□□□□ -1.11
TRIM39-203ENST00000396547 RAB1CQ92928 201 aa8.12□□□□□ -1.11
TRIM39-203ENST00000396547 TMEM140Q9NV12 185 aa8.12□□□□□ -1.11
TRIM39-203ENST00000396547 WASHC3Q9Y3C0 194 aa8.12□□□□□ -1.11
TRIM39-203ENST00000396547 IGHV3OR15-7A0A075B7D8 119 aa8.11□□□□□ -1.11
TRIM39-203ENST00000396547 CIDEAO60543 219 aa8.11□□□□□ -1.11
TRIM39-203ENST00000396547 ESDP10768 282 aa8.11□□□□□ -1.11
TRIM39-203ENST00000396547 FOXA3P55318 350 aaPredicted RBP8.11□□□□□ -1.11
TRIM39-203ENST00000396547 CX3CL1P78423 397 aa8.11□□□□□ -1.11
TRIM39-203ENST00000396547 ZNF146Q15072 292 aa8.11□□□□□ -1.11
TRIM39-203ENST00000396547 WDR73Q6P4I2 378 aa8.11□□□□□ -1.11
TRIM39-203ENST00000396547 Q8IYB0 196 aa8.11□□□□□ -1.11
TRIM39-203ENST00000396547 Q8TCH9 128 aa8.11□□□□□ -1.11
TRIM39-203ENST00000396547 TMEM45BQ96B21 275 aa8.11□□□□□ -1.11
TRIM39-203ENST00000396547 S1PR3Q99500 378 aa8.11□□□□□ -1.11
TRIM39-203ENST00000396547 GP6Q9HCN6 339 aa8.11□□□□□ -1.11
TRIM39-203ENST00000396547 TRAV5A0A0B4J249 113 aa8.11□□□□□ -1.11
TRIM39-203ENST00000396547 A6NJY4 79 aa8.11□□□□□ -1.11
TRIM39-203ENST00000396547 PROP1O75360 226 aa8.11□□□□□ -1.11
TRIM39-203ENST00000396547 IGLL1P15814 213 aa8.11□□□□□ -1.11
TRIM39-203ENST00000396547 NPY1RP25929 384 aa8.11□□□□□ -1.11
TRIM39-203ENST00000396547 ERVK11-1P61568 191 aa8.11□□□□□ -1.11
TRIM39-203ENST00000396547 ABHD17BQ5VST6 288 aa8.11□□□□□ -1.11
TRIM39-203ENST00000396547 MRPL52Q86TS9 123 aaKnown RBP8.11□□□□□ -1.11
TRIM39-203ENST00000396547 ORAOV1Q8WV07 137 aa8.11□□□□□ -1.11
TRIM39-203ENST00000396547 TECRQ9NZ01 308 aaKnown RBP8.11□□□□□ -1.11
TRIM39-203ENST00000396547 IL19Q9UHD0 177 aa8.11□□□□□ -1.11
TRIM39-203ENST00000396547 MED13Q9UHV7 2174 aa8.11□□□□□ -1.11
TRIM39-203ENST00000396547 TRGV10A0A0A0MS01 117 aa8.1□□□□□ -1.11
TRIM39-203ENST00000396547 SNAI2O43623 268 aa8.1□□□□□ -1.11
TRIM39-203ENST00000396547 MPDU1O75352 247 aa8.1□□□□□ -1.11
TRIM39-203ENST00000396547 AMY1AP04745 511 aa8.1□□□□□ -1.11
TRIM39-203ENST00000396547 DUTP33316 252 aaKnown RBP8.1□□□□□ -1.11
TRIM39-203ENST00000396547 TCTAP57738 103 aa8.1□□□□□ -1.11
TRIM39-203ENST00000396547 MPV17L2Q567V2 206 aa8.1□□□□□ -1.11
TRIM39-203ENST00000396547 OR2D3Q8NGH3 330 aa8.1□□□□□ -1.11
TRIM39-203ENST00000396547 OR2T6Q8NHC8 308 aa8.1□□□□□ -1.11
TRIM39-203ENST00000396547 OR8B2Q96RD0 313 aa8.1□□□□□ -1.11
TRIM39-203ENST00000396547 NABP2Q9BQ15 211 aa8.1□□□□□ -1.11
TRIM39-203ENST00000396547 LINC00470Q9BZP3 86 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms