RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 HRASP01112 189 aa11.37□□□□□ -0.59
SNCA-204ENST00000394989 CDSNQ15517 529 aa11.37□□□□□ -0.59
SNCA-204ENST00000394989 ARSJQ5FYB0 599 aaPredicted RBP11.37□□□□□ -0.59
SNCA-204ENST00000394989 H1FXQ92522 213 aaKnown RBP11.37□□□□□ -0.59
SNCA-204ENST00000394989 MRPL20Q9BYC9 149 aaKnown RBP11.37□□□□□ -0.59
SNCA-204ENST00000394989 SLC35D1Q9NTN3 355 aa11.37□□□□□ -0.59
SNCA-204ENST00000394989 ITPR1Q14643 2758 aa11.37□□□□□ -0.59
SNCA-204ENST00000394989 LOXP28300 417 aaPredicted RBP11.36□□□□□ -0.59
SNCA-204ENST00000394989 APOBEC3AP31941 199 aaPredicted RBP11.36□□□□□ -0.59
SNCA-204ENST00000394989 DIAPH2-AS1Q14236 149 aa11.36□□□□□ -0.59
SNCA-204ENST00000394989 TMEM208Q9BTX3 173 aa11.36□□□□□ -0.59
SNCA-204ENST00000394989 VSTM5A8MXK1 200 aa11.36□□□□□ -0.59
SNCA-204ENST00000394989 IFNA1P01562 189 aa11.36□□□□□ -0.59
SNCA-204ENST00000394989 CA7P43166 264 aa11.36□□□□□ -0.59
SNCA-204ENST00000394989 TDRG1Q3Y452 100 aa11.36□□□□□ -0.59
SNCA-204ENST00000394989 SLC24A4Q8NFF2 622 aa11.36□□□□□ -0.59
SNCA-204ENST00000394989 LSM4Q9Y4Z0 139 aaKnown RBP11.36□□□□□ -0.59
SNCA-204ENST00000394989 OR51B2Q9Y5P1 312 aa11.36□□□□□ -0.59
SNCA-204ENST00000394989 NDUFB3O43676 98 aa11.36□□□□□ -0.59
SNCA-204ENST00000394989 OPN1MWP04001 364 aa11.36□□□□□ -0.59
SNCA-204ENST00000394989 OPN1MW2P0DN77 364 aa11.36□□□□□ -0.59
SNCA-204ENST00000394989 OPN1MW3P0DN78 364 aa11.36□□□□□ -0.59
SNCA-204ENST00000394989 EFNB3Q15768 340 aa11.36□□□□□ -0.59
SNCA-204ENST00000394989 NOL4LQ96MY1 436 aaPredicted RBP11.36□□□□□ -0.59
SNCA-204ENST00000394989 GGTLC1Q9BX51 225 aa11.36□□□□□ -0.59
SNCA-204ENST00000394989 SDF2L1Q9HCN8 221 aa11.36□□□□□ -0.59
SNCA-204ENST00000394989 FAM90A27PA6NNH2 459 aa11.35□□□□□ -0.59
SNCA-204ENST00000394989 UPK2O00526 184 aa11.35□□□□□ -0.59
SNCA-204ENST00000394989 CA2P00918 260 aa11.35□□□□□ -0.59
SNCA-204ENST00000394989 SAA1P0DJI8 122 aaPredicted RBP11.35□□□□□ -0.59
SNCA-204ENST00000394989 CHRNA7P36544 502 aa11.35□□□□□ -0.59
SNCA-204ENST00000394989 REG1BP48304 166 aa11.35□□□□□ -0.59
SNCA-204ENST00000394989 CDC34P49427 236 aaPredicted RBP11.35□□□□□ -0.59
SNCA-204ENST00000394989 DLX6P56179 175 aa11.35□□□□□ -0.59
SNCA-204ENST00000394989 RTL8BQ17RB0 113 aa11.35□□□□□ -0.59
SNCA-204ENST00000394989 KAAG1Q9UBP8 84 aa11.35□□□□□ -0.59
SNCA-204ENST00000394989 IGHV1-69-2A0A0G2JMI3 117 aa11.35□□□□□ -0.59
SNCA-204ENST00000394989 MPDU1O75352 247 aa11.35□□□□□ -0.59
SNCA-204ENST00000394989 CD3EP07766 207 aa11.35□□□□□ -0.59
SNCA-204ENST00000394989 COL8A2P25067 703 aa11.35□□□□□ -0.59
SNCA-204ENST00000394989 NPY1RP25929 384 aa11.35□□□□□ -0.59
SNCA-204ENST00000394989 OPRK1P41145 380 aa11.35□□□□□ -0.59
SNCA-204ENST00000394989 GALR1P47211 349 aa11.35□□□□□ -0.59
SNCA-204ENST00000394989 ACOT6Q3I5F7 207 aaPredicted RBP11.35□□□□□ -0.59
SNCA-204ENST00000394989 LRRC10Q5BKY1 277 aa11.35□□□□□ -0.59
SNCA-204ENST00000394989 PATZ1Q9HBE1 687 aaKnown RBP11.35□□□□□ -0.59
SNCA-204ENST00000394989 ANKHD1Q8IWZ3 2542 aaKnown RBP11.35□□□□□ -0.59
SNCA-204ENST00000394989 H0YJW9 148 aa11.34□□□□□ -0.59
SNCA-204ENST00000394989 TGOLN2O43493 480 aa11.34□□□□□ -0.59
SNCA-204ENST00000394989 TMEM256Q8N2U0 113 aa11.34□□□□□ -0.59
SNCA-204ENST00000394989 PAM16Q9Y3D7 125 aa11.34□□□□□ -0.59
SNCA-204ENST00000394989 H7BYZ3 331 aa11.34□□□□□ -0.59
SNCA-204ENST00000394989 J3QR06 171 aa11.34□□□□□ -0.59
SNCA-204ENST00000394989 HNF1AP20823 631 aa11.34□□□□□ -0.59
SNCA-204ENST00000394989 PSMB3P49720 205 aa11.34□□□□□ -0.59
SNCA-204ENST00000394989 PRCDQ00LT1 54 aa11.34□□□□□ -0.59
SNCA-204ENST00000394989 FBXL19-AS1Q494R0 122 aa11.34□□□□□ -0.59
SNCA-204ENST00000394989 LBHQ53QV2 105 aaPredicted RBP11.34□□□□□ -0.59
SNCA-204ENST00000394989 MIC13Q5XKP0 118 aa11.34□□□□□ -0.59
SNCA-204ENST00000394989 C11orf42Q8N5U0 333 aa11.34□□□□□ -0.59
SNCA-204ENST00000394989 OR5AN1Q8NGI8 311 aa11.34□□□□□ -0.59
SNCA-204ENST00000394989 OR5B12Q96R08 314 aa11.34□□□□□ -0.59
SNCA-204ENST00000394989 HINT2Q9BX68 163 aa11.34□□□□□ -0.59
SNCA-204ENST00000394989 PRNDQ9UKY0 176 aa11.34□□□□□ -0.59
SNCA-204ENST00000394989 ZNF257Q9Y2Q1 563 aa11.34□□□□□ -0.59
SNCA-204ENST00000394989 TEX50A0A1B0GTY4 177 aa11.34□□□□□ -0.59
SNCA-204ENST00000394989 B9A039 149 aa11.34□□□□□ -0.59
SNCA-204ENST00000394989 LYNX1G3V0Z9 82 aa11.34□□□□□ -0.59
SNCA-204ENST00000394989 LYNX1P0DP58 116 aa11.34□□□□□ -0.59
SNCA-204ENST00000394989 PNRC1Q12796 327 aaPredicted RBP11.34□□□□□ -0.59
SNCA-204ENST00000394989 ZNF596Q8TC21 504 aa11.34□□□□□ -0.59
SNCA-204ENST00000394989 NPVFQ9HCQ7 196 aa11.34□□□□□ -0.59
SNCA-204ENST00000394989 BET1LQ9NYM9 111 aa11.34□□□□□ -0.59
SNCA-204ENST00000394989 PXMP4Q9Y6I8 212 aa11.34□□□□□ -0.59
SNCA-204ENST00000394989 GRIFINA4D1Z8 144 aa11.33□□□□□ -0.6
SNCA-204ENST00000394989 TCF21O43680 179 aa11.33□□□□□ -0.6
SNCA-204ENST00000394989 PAGE4O60829 102 aa11.33□□□□□ -0.6
SNCA-204ENST00000394989 UCNP55089 124 aa11.33□□□□□ -0.6
SNCA-204ENST00000394989 RAB1CQ92928 201 aa11.33□□□□□ -0.6
SNCA-204ENST00000394989 ST6GALNAC6Q969X2 333 aa11.33□□□□□ -0.6
SNCA-204ENST00000394989 MANBALQ9NQG1 85 aa11.33□□□□□ -0.6
SNCA-204ENST00000394989 FKBP11Q9NYL4 201 aa11.33□□□□□ -0.6
SNCA-204ENST00000394989 CHD8Q9HCK8 2581 aa11.33□□□□□ -0.6
SNCA-204ENST00000394989 B4DEV8 164 aa11.33□□□□□ -0.6
SNCA-204ENST00000394989 CCL21O00585 134 aa11.33□□□□□ -0.6
SNCA-204ENST00000394989 NUPR1O60356 82 aa11.33□□□□□ -0.6
SNCA-204ENST00000394989 KBTBD11O94819 623 aa11.33□□□□□ -0.6
SNCA-204ENST00000394989 OR5I1Q13606 314 aa11.33□□□□□ -0.6
SNCA-204ENST00000394989 TMEM155Q4W5P6 130 aa11.33□□□□□ -0.6
SNCA-204ENST00000394989 SSMEM1Q8WWF3 244 aa11.33□□□□□ -0.6
SNCA-204ENST00000394989 TMEM18Q96B42 140 aa11.33□□□□□ -0.6
SNCA-204ENST00000394989 TBX15Q96SF7 602 aa11.33□□□□□ -0.6
SNCA-204ENST00000394989 NBASA2RRP1 2371 aa11.33□□□□□ -0.6
SNCA-204ENST00000394989 RAB4BP61018 213 aa11.32□□□□□ -0.6
SNCA-204ENST00000394989 TOMM20LQ6UXN7 152 aa11.32□□□□□ -0.6
SNCA-204ENST00000394989 ASH1LQ9NR48 2969 aaKnown RBP11.32□□□□□ -0.6
SNCA-204ENST00000394989 E7EUB6 86 aa11.32□□□□□ -0.6
SNCA-204ENST00000394989 TMEM250H0YL14 139 aa11.32□□□□□ -0.6
SNCA-204ENST00000394989 CHRNB4P30926 498 aa11.32□□□□□ -0.6
SNCA-204ENST00000394989 ADORA2A-AS1P86434 159 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms