RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 NKX2-1P43699 371 aaPredicted RBP5.66□□□□□ -1.5
RTN4-205ENST00000394609 TAS2R30P59541 319 aa5.66□□□□□ -1.5
RTN4-205ENST00000394609 RPL23AP62750 156 aaKnown RBP5.66□□□□□ -1.5
RTN4-205ENST00000394609 SRSF1Q07955 248 aaKnown RBP eCLIP5.66□□□□□ -1.56e-8■■□□□ 14
RTN4-205ENST00000394609 CATR1Q13166 79 aa5.66□□□□□ -1.5
RTN4-205ENST00000394609 ZNF343Q6P1L6 599 aa5.66□□□□□ -1.5
RTN4-205ENST00000394609 ZNF66Q6ZN08 573 aa5.66□□□□□ -1.5
RTN4-205ENST00000394609 ZNF439Q8NDP4 499 aa5.66□□□□□ -1.5
RTN4-205ENST00000394609 TMEM170AQ8WVE7 144 aa5.66□□□□□ -1.5
RTN4-205ENST00000394609 RAB1CQ92928 201 aa5.66□□□□□ -1.5
RTN4-205ENST00000394609 TIMD4Q96H15 378 aa5.66□□□□□ -1.5
RTN4-205ENST00000394609 HSD17B10Q99714 261 aaKnown RBP5.66□□□□□ -1.5
RTN4-205ENST00000394609 PSMG3Q9BT73 122 aaPredicted RBP5.66□□□□□ -1.5
RTN4-205ENST00000394609 PRO1933Q9H354 126 aa5.66□□□□□ -1.5
RTN4-205ENST00000394609 CHODLQ9H9P2 273 aa5.66□□□□□ -1.5
RTN4-205ENST00000394609 CACNG5Q9UF02 275 aa5.66□□□□□ -1.5
RTN4-205ENST00000394609 MED13LQ71F56 2210 aa5.66□□□□□ -1.5
RTN4-205ENST00000394609 UBR5O95071 2799 aaPredicted RBP5.66□□□□□ -1.5
RTN4-205ENST00000394609 CENPEQ02224 2701 aa5.66□□□□□ -1.5
RTN4-205ENST00000394609 A1L4Q6 167 aa5.66□□□□□ -1.5
RTN4-205ENST00000394609 RAB29O14966 203 aa5.66□□□□□ -1.5
RTN4-205ENST00000394609 DLEU1O43261 78 aa5.66□□□□□ -1.5
RTN4-205ENST00000394609 SSSCA1O60232 199 aa5.66□□□□□ -1.5
RTN4-205ENST00000394609 IFNA1P01562 189 aa5.66□□□□□ -1.5
RTN4-205ENST00000394609 MBP02144 154 aa5.66□□□□□ -1.5
RTN4-205ENST00000394609 PFN1P07737 140 aaKnown RBP5.66□□□□□ -1.5
RTN4-205ENST00000394609 WNT2P09544 360 aa5.66□□□□□ -1.5
RTN4-205ENST00000394609 BCL2P10415 239 aa5.66□□□□□ -1.5
RTN4-205ENST00000394609 RAB7AP51149 207 aa5.66□□□□□ -1.5
RTN4-205ENST00000394609 DLX6P56179 175 aa5.66□□□□□ -1.5
RTN4-205ENST00000394609 RANP62826 216 aaKnown RBP5.66□□□□□ -1.5
RTN4-205ENST00000394609 CCL20P78556 96 aa5.66□□□□□ -1.5
RTN4-205ENST00000394609 LCN2P80188 198 aa5.66□□□□□ -1.5
RTN4-205ENST00000394609 MRPS11P82912 194 aaKnown RBP5.66□□□□□ -1.5
RTN4-205ENST00000394609 MSMO1Q15800 293 aa5.66□□□□□ -1.5
RTN4-205ENST00000394609 TMEM155Q4W5P6 130 aa5.66□□□□□ -1.5
RTN4-205ENST00000394609 ODF3L1Q8IXM7 274 aa5.66□□□□□ -1.5
RTN4-205ENST00000394609 OR8B3Q8NGG8 313 aa5.66□□□□□ -1.5
RTN4-205ENST00000394609 OR4X1Q8NH49 305 aa5.66□□□□□ -1.5
RTN4-205ENST00000394609 BSCL2Q96G97 398 aaPredicted RBP5.66□□□□□ -1.5
RTN4-205ENST00000394609 EAF1Q96JC9 268 aaPredicted RBP5.66□□□□□ -1.5
RTN4-205ENST00000394609 OR8B2Q96RD0 313 aa5.66□□□□□ -1.5
RTN4-205ENST00000394609 KRTAP4-2Q9BYR5 136 aa5.66□□□□□ -1.5
RTN4-205ENST00000394609 YLPM1P49750 1951 aaKnown RBP5.65□□□□□ -1.5
RTN4-205ENST00000394609 PPIAL4CA0A0B4J2A2 164 aa5.65□□□□□ -1.5
RTN4-205ENST00000394609 TMEM250H0YL14 139 aa5.65□□□□□ -1.5
RTN4-205ENST00000394609 CHST1O43916 411 aa5.65□□□□□ -1.5
RTN4-205ENST00000394609 FSTL3O95633 263 aa5.65□□□□□ -1.5
RTN4-205ENST00000394609 PPIAL4GP0DN37 164 aa5.65□□□□□ -1.5
RTN4-205ENST00000394609 REG1BP48304 166 aa5.65□□□□□ -1.5
RTN4-205ENST00000394609 EFNA4P52798 201 aa5.65□□□□□ -1.5
RTN4-205ENST00000394609 SERF2P84101 59 aa5.65□□□□□ -1.5
RTN4-205ENST00000394609 TMEM241Q24JQ0 296 aa5.65□□□□□ -1.5
RTN4-205ENST00000394609 WDR25Q64LD2 544 aaPredicted RBP5.65□□□□□ -1.5
RTN4-205ENST00000394609 CYP2G1PQ6ZSU1 146 aa5.65□□□□□ -1.5
RTN4-205ENST00000394609 SLC25A48Q6ZT89 311 aaKnown RBP5.65□□□□□ -1.5
RTN4-205ENST00000394609 VKORC1L1Q8N0U8 176 aa5.65□□□□□ -1.5
RTN4-205ENST00000394609 C11orf42Q8N5U0 333 aa5.65□□□□□ -1.5
RTN4-205ENST00000394609 TMEM252Q8N6L7 170 aa5.65□□□□□ -1.5
RTN4-205ENST00000394609 ZNF525Q8N782 197 aa5.65□□□□□ -1.5
RTN4-205ENST00000394609 LSM10Q969L4 123 aaKnown RBP5.65□□□□□ -1.5
RTN4-205ENST00000394609 ANAPC16Q96DE5 110 aa5.65□□□□□ -1.5
RTN4-205ENST00000394609 NEIL1Q96FI4 390 aaPredicted RBP5.65□□□□□ -1.5
RTN4-205ENST00000394609 S1PR3Q99500 378 aa5.65□□□□□ -1.5
RTN4-205ENST00000394609 ATP5SQ99766 215 aa5.65□□□□□ -1.5
RTN4-205ENST00000394609 SNHG12Q9BXW3 62 aa5.65□□□□□ -1.5
RTN4-205ENST00000394609 NAT8Q9UHE5 227 aa5.65□□□□□ -1.5
RTN4-205ENST00000394609 CRYBG3Q68DQ2 2970 aa5.64□□□□□ -1.51
RTN4-205ENST00000394609 C22orf46C9J442 243 aa5.64□□□□□ -1.51
RTN4-205ENST00000394609 ITGB1BP1O14713 200 aa5.64□□□□□ -1.51
RTN4-205ENST00000394609 VENTXO95231 258 aa5.64□□□□□ -1.51
RTN4-205ENST00000394609 TMEM50AO95807 157 aa5.64□□□□□ -1.51
RTN4-205ENST00000394609 IGHV1-8P0DP01 117 aa5.64□□□□□ -1.51
RTN4-205ENST00000394609 CD99P14209 185 aa5.64□□□□□ -1.51
RTN4-205ENST00000394609 SRP14P37108 136 aaKnown RBP5.64□□□□□ -1.51
RTN4-205ENST00000394609 GPR6P46095 362 aaPredicted RBP5.64□□□□□ -1.51
RTN4-205ENST00000394609 ABHD12Q8N2K0 398 aa5.64□□□□□ -1.51
RTN4-205ENST00000394609 OR51G1Q8NGK1 321 aa5.64□□□□□ -1.51
RTN4-205ENST00000394609 OR10X1Q8NGY0 326 aa5.64□□□□□ -1.51
RTN4-205ENST00000394609 PINX1Q96BK5 328 aaKnown RBP5.64□□□□□ -1.51
RTN4-205ENST00000394609 C20orf144Q9BQM9 153 aa5.64□□□□□ -1.51
RTN4-205ENST00000394609 GOLT1BQ9Y3E0 138 aa5.64□□□□□ -1.51
RTN4-205ENST00000394609 URGCP-MRPS24S4R325 110 aa5.64□□□□□ -1.51
RTN4-205ENST00000394609 MAP1AP78559 2803 aaPredicted RBP5.64□□□□□ -1.51
RTN4-205ENST00000394609 IGSF23A1L1A6 192 aa5.64□□□□□ -1.51
RTN4-205ENST00000394609 XKRY2A2RUG3 117 aa5.64□□□□□ -1.51
RTN4-205ENST00000394609 FAM24AA6NFZ4 105 aa5.64□□□□□ -1.51
RTN4-205ENST00000394609 H3BP45 60 aa5.64□□□□□ -1.51
RTN4-205ENST00000394609 J3QR06 171 aa5.64□□□□□ -1.51
RTN4-205ENST00000394609 OVOL3O00110 214 aa5.64□□□□□ -1.51
RTN4-205ENST00000394609 RBMXL2O75526 392 aaKnown RBP5.64□□□□□ -1.51
RTN4-205ENST00000394609 CT45A6P0DMU7 189 aa5.64□□□□□ -1.51
RTN4-205ENST00000394609 CT45A5P0DMU8 189 aa5.64□□□□□ -1.51
RTN4-205ENST00000394609 CT45A7P0DMV0 189 aa5.64□□□□□ -1.51
RTN4-205ENST00000394609 IAPPP10997 89 aa5.64□□□□□ -1.51
RTN4-205ENST00000394609 OR10J1P30954 320 aa5.64□□□□□ -1.51
RTN4-205ENST00000394609 GNB2P62879 340 aa5.64□□□□□ -1.51
RTN4-205ENST00000394609 VAMP2P63027 116 aa5.64□□□□□ -1.51
RTN4-205ENST00000394609 DIAPH2-AS1Q14236 149 aa5.64□□□□□ -1.51
RTN4-205ENST00000394609 TMEM30BQ3MIR4 351 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms