RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 FAM209BQ5JX69 171 aa14.64□□□□□ -0.07
PDLIM7-204ENST00000393546 SLC25A24Q6NUK1 477 aa14.64□□□□□ -0.07
PDLIM7-204ENST00000393546 LGI3Q8N145 548 aa14.64□□□□□ -0.07
PDLIM7-204ENST00000393546 DCUN1D4Q92564 292 aa14.64□□□□□ -0.07
PDLIM7-204ENST00000393546 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.64□□□□□ -0.07
PDLIM7-204ENST00000393546 A0A0G2JRQ6 117 aa14.63□□□□□ -0.07
PDLIM7-204ENST00000393546 OVOL1O14753 267 aa14.63□□□□□ -0.07
PDLIM7-204ENST00000393546 PLA2G10O15496 165 aa14.63□□□□□ -0.07
PDLIM7-204ENST00000393546 ST8SIA3O43173 380 aa14.63□□□□□ -0.07
PDLIM7-204ENST00000393546 VAMP1P23763 118 aa14.63□□□□□ -0.07
PDLIM7-204ENST00000393546 ERHP84090 104 aaKnown RBP14.63□□□□□ -0.07
PDLIM7-204ENST00000393546 DEFA6Q01524 100 aa14.63□□□□□ -0.07
PDLIM7-204ENST00000393546 ZNF846Q147U1 533 aa14.63□□□□□ -0.07
PDLIM7-204ENST00000393546 OR1L6Q8NGR2 347 aa14.63□□□□□ -0.07
PDLIM7-204ENST00000393546 DLX4Q92988 240 aaPredicted RBP14.63□□□□□ -0.07
PDLIM7-204ENST00000393546 GPR146Q96CH1 333 aa14.63□□□□□ -0.07
PDLIM7-204ENST00000393546 WDR12Q9GZL7 423 aaKnown RBP14.63□□□□□ -0.07
PDLIM7-204ENST00000393546 PLEKHA3Q9HB20 300 aa14.63□□□□□ -0.07
PDLIM7-204ENST00000393546 PRR13Q9NZ81 148 aa14.63□□□□□ -0.07
PDLIM7-204ENST00000393546 F11RQ9Y624 299 aaKnown RBP14.63□□□□□ -0.07
PDLIM7-204ENST00000393546 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.62□□□□□ -0.07
PDLIM7-204ENST00000393546 A0A0B4J2A0 478 aa14.62□□□□□ -0.07
PDLIM7-204ENST00000393546 LYRM1O43325 122 aa14.62□□□□□ -0.07
PDLIM7-204ENST00000393546 HOXD3P31249 432 aaPredicted RBP14.62□□□□□ -0.07
PDLIM7-204ENST00000393546 UBE2MP61081 183 aaKnown RBP14.62□□□□□ -0.07
PDLIM7-204ENST00000393546 KPRPQ5T749 579 aaPredicted RBP14.62□□□□□ -0.07
PDLIM7-204ENST00000393546 C9orf66Q5T8R8 295 aa14.62□□□□□ -0.07
PDLIM7-204ENST00000393546 Q6ZRM9 215 aa14.62□□□□□ -0.07
PDLIM7-204ENST00000393546 OR2C3Q8N628 320 aa14.62□□□□□ -0.07
PDLIM7-204ENST00000393546 SLC35G3Q8N808 338 aa14.62□□□□□ -0.07
PDLIM7-204ENST00000393546 EEF1AKMT3Q96AZ1 226 aa14.62□□□□□ -0.07
PDLIM7-204ENST00000393546 CXorf58Q96LI9 332 aa14.62□□□□□ -0.07
PDLIM7-204ENST00000393546 SHPKQ9UHJ6 478 aa14.62□□□□□ -0.07
PDLIM7-204ENST00000393546 SEC14L6B5MCN3 397 aa14.61□□□□□ -0.07
PDLIM7-204ENST00000393546 SFT2D2O95562 160 aa14.61□□□□□ -0.07
PDLIM7-204ENST00000393546 BTCP35070 178 aa14.61□□□□□ -0.07
PDLIM7-204ENST00000393546 TATDN3Q17R31 274 aa14.61□□□□□ -0.07
PDLIM7-204ENST00000393546 LYZL2Q7Z4W2 148 aa14.61□□□□□ -0.07
PDLIM7-204ENST00000393546 ENY2Q9NPA8 101 aa14.61□□□□□ -0.07
PDLIM7-204ENST00000393546 CACNG5Q9UF02 275 aa14.61□□□□□ -0.07
PDLIM7-204ENST00000393546 TRBV7-1A0A0A6YYK4 115 aa14.6□□□□□ -0.07
PDLIM7-204ENST00000393546 TRBV12-3P01733 135 aa14.6□□□□□ -0.07
PDLIM7-204ENST00000393546 PPP1R1AQ13522 171 aa14.6□□□□□ -0.07
PDLIM7-204ENST00000393546 RPEL1Q2QD12 228 aa14.6□□□□□ -0.07
PDLIM7-204ENST00000393546 SPINK9Q5DT21 86 aa14.6□□□□□ -0.07
PDLIM7-204ENST00000393546 OR1P1Q8NH06 330 aa14.6□□□□□ -0.07
PDLIM7-204ENST00000393546 OR52E5Q8NH55 327 aa14.6□□□□□ -0.07
PDLIM7-204ENST00000393546 CACFD1Q9UGQ2 172 aa14.6□□□□□ -0.07
PDLIM7-204ENST00000393546 FLVCR2Q9UPI3 526 aa14.6□□□□□ -0.07
PDLIM7-204ENST00000393546 DMRT1Q9Y5R6 373 aa14.6□□□□□ -0.07
PDLIM7-204ENST00000393546 DUXBA0A1W2PPF3 345 aa14.59□□□□□ -0.07
PDLIM7-204ENST00000393546 IGHV3-23P01764 117 aa14.59□□□□□ -0.07
PDLIM7-204ENST00000393546 SULT1A3P0DMM9 295 aa14.59□□□□□ -0.07
PDLIM7-204ENST00000393546 SULT1A4P0DMN0 295 aa14.59□□□□□ -0.07
PDLIM7-204ENST00000393546 SPCS3P61009 180 aa14.59□□□□□ -0.07
PDLIM7-204ENST00000393546 AARDQ4LEZ3 155 aa14.59□□□□□ -0.07
PDLIM7-204ENST00000393546 LRTM2Q8N967 370 aa14.59□□□□□ -0.07
PDLIM7-204ENST00000393546 VN1R17PQ8TDU5 208 aa14.59□□□□□ -0.07
PDLIM7-204ENST00000393546 S4R3C0 116 aa14.59□□□□□ -0.07
PDLIM7-204ENST00000393546 INS-IGF2F8WCM5 200 aa14.58□□□□□ -0.08
PDLIM7-204ENST00000393546 SNCAP37840 140 aa14.58□□□□□ -0.08
PDLIM7-204ENST00000393546 HOXA1P49639 335 aaPredicted RBP14.58□□□□□ -0.08
PDLIM7-204ENST00000393546 INSL3P51460 131 aa14.58□□□□□ -0.08
PDLIM7-204ENST00000393546 MFAP2P55001 183 aa14.58□□□□□ -0.08
PDLIM7-204ENST00000393546 KLF5Q13887 457 aaPredicted RBP14.58□□□□□ -0.08
PDLIM7-204ENST00000393546 ANKRD55Q3KP44 614 aa14.58□□□□□ -0.08
PDLIM7-204ENST00000393546 CLEC19AQ6UXS0 136 aa14.58□□□□□ -0.08
PDLIM7-204ENST00000393546 ZNF114Q8NC26 417 aa14.58□□□□□ -0.08
PDLIM7-204ENST00000393546 ELOVL1Q9BW60 279 aa14.58□□□□□ -0.08
PDLIM7-204ENST00000393546 ZMAT5Q9UDW3 170 aaKnown RBP14.58□□□□□ -0.08
PDLIM7-204ENST00000393546 C9orf170A2RU37 121 aa14.57□□□□□ -0.08
PDLIM7-204ENST00000393546 MFSD2BA6NFX1 497 aa14.57□□□□□ -0.08
PDLIM7-204ENST00000393546 BMPR1BO00238 502 aa14.57□□□□□ -0.08
PDLIM7-204ENST00000393546 GGCTO75223 188 aaKnown RBP14.57□□□□□ -0.08
PDLIM7-204ENST00000393546 CLEC3BP05452 202 aa14.57□□□□□ -0.08
PDLIM7-204ENST00000393546 OR4E1P0C645 316 aa14.57□□□□□ -0.08
PDLIM7-204ENST00000393546 SUB1P53999 127 aaKnown RBP eCLIP14.57□□□□□ -0.08
PDLIM7-204ENST00000393546 SMCO1Q147U7 214 aa14.57□□□□□ -0.08
PDLIM7-204ENST00000393546 NMSQ5H8A3 153 aa14.57□□□□□ -0.08
PDLIM7-204ENST00000393546 MZT2BQ6NZ67 158 aa14.57□□□□□ -0.08
PDLIM7-204ENST00000393546 A0A1B0GU03 582 aa14.56□□□□□ -0.08
PDLIM7-204ENST00000393546 PPP5D1E7EU14 171 aa14.56□□□□□ -0.08
PDLIM7-204ENST00000393546 WIPF1O43516 503 aa14.56□□□□□ -0.08
PDLIM7-204ENST00000393546 HLA-AP01891 365 aaKnown RBP14.56□□□□□ -0.08
PDLIM7-204ENST00000393546 TCRBP04435 133 aa14.56□□□□□ -0.08
PDLIM7-204ENST00000393546 ARL3P36405 182 aa14.56□□□□□ -0.08
PDLIM7-204ENST00000393546 SYNJ2BPP57105 145 aa14.56□□□□□ -0.08
PDLIM7-204ENST00000393546 PDLIM3Q53GG5 364 aaPredicted RBP14.56□□□□□ -0.08
PDLIM7-204ENST00000393546 ACSM6Q6P461 480 aa14.56□□□□□ -0.08
PDLIM7-204ENST00000393546 ZNF502Q8TBZ5 544 aa14.56□□□□□ -0.08
PDLIM7-204ENST00000393546 MISP3Q96FF7 219 aa14.56□□□□□ -0.08
PDLIM7-204ENST00000393546 CCDC140Q96MF4 163 aa14.56□□□□□ -0.08
PDLIM7-204ENST00000393546 OR4C12Q96R67 309 aa14.56□□□□□ -0.08
PDLIM7-204ENST00000393546 MEGF8Q7Z7M0 2845 aa14.56□□□□□ -0.08
PDLIM7-204ENST00000393546 CEBPZOSA8MTT3 80 aa14.55□□□□□ -0.08
PDLIM7-204ENST00000393546 SAP30O75446 220 aa14.55□□□□□ -0.08
PDLIM7-204ENST00000393546 UPK1BO75841 260 aa14.55□□□□□ -0.08
PDLIM7-204ENST00000393546 ANXA7P20073 488 aaKnown RBP14.55□□□□□ -0.08
PDLIM7-204ENST00000393546 EGFEM1PQ0D2K5 195 aa14.55□□□□□ -0.08
PDLIM7-204ENST00000393546 C4orf46Q504U0 113 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms