RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 TEPPQ6URK8 271 aa13.52□□□□□ -0.24
PHTF1-205ENST00000393357 KLHDC1Q8N7A1 406 aa13.52□□□□□ -0.24
PHTF1-205ENST00000393357 Q8TCH9 128 aa13.52□□□□□ -0.24
PHTF1-205ENST00000393357 RND1Q92730 232 aa13.52□□□□□ -0.24
PHTF1-205ENST00000393357 COX11Q9Y6N1 276 aa13.52□□□□□ -0.24
PHTF1-205ENST00000393357 DMXL1Q9Y485 3027 aa13.52□□□□□ -0.24
PHTF1-205ENST00000393357 GNG5P63218 68 aa13.52□□□□□ -0.24
PHTF1-205ENST00000393357 KRTAP27-1Q3LI81 207 aa13.52□□□□□ -0.24
PHTF1-205ENST00000393357 AMMECR1LQ6DCA0 310 aa13.52□□□□□ -0.24
PHTF1-205ENST00000393357 OR52E5Q8NH55 327 aa13.52□□□□□ -0.24
PHTF1-205ENST00000393357 TCF19Q9Y242 345 aa13.52□□□□□ -0.24
PHTF1-205ENST00000393357 SPINT2O43291 252 aa13.52□□□□□ -0.25
PHTF1-205ENST00000393357 TIMM8AO60220 97 aaPredicted RBP13.52□□□□□ -0.25
PHTF1-205ENST00000393357 PRRX1P54821 245 aa13.52□□□□□ -0.25
PHTF1-205ENST00000393357 OR1C1Q15619 314 aa13.52□□□□□ -0.25
PHTF1-205ENST00000393357 OR9G1Q8NH87 305 aa13.52□□□□□ -0.25
PHTF1-205ENST00000393357 LNP1A1A4G5 178 aa13.51□□□□□ -0.25
PHTF1-205ENST00000393357 PROP1O75360 226 aa13.51□□□□□ -0.25
PHTF1-205ENST00000393357 APOA2P02652 100 aa13.51□□□□□ -0.25
PHTF1-205ENST00000393357 GABRA6Q16445 453 aa13.51□□□□□ -0.25
PHTF1-205ENST00000393357 MORN5Q5VZ52 161 aa13.51□□□□□ -0.25
PHTF1-205ENST00000393357 SPATA12Q7Z6I5 190 aa13.51□□□□□ -0.25
PHTF1-205ENST00000393357 TAAR6Q96RI8 345 aa13.51□□□□□ -0.25
PHTF1-205ENST00000393357 TPPP3Q9BW30 176 aa13.51□□□□□ -0.25
PHTF1-205ENST00000393357 LY6G6EA0A0G2JKS1 128 aa13.51□□□□□ -0.25
PHTF1-205ENST00000393357 ARR3P36575 388 aa13.51□□□□□ -0.25
PHTF1-205ENST00000393357 TCF24Q7RTU0 167 aa13.51□□□□□ -0.25
PHTF1-205ENST00000393357 NEUROG1Q92886 237 aa13.51□□□□□ -0.25
PHTF1-205ENST00000393357 S1PR3Q99500 378 aa13.51□□□□□ -0.25
PHTF1-205ENST00000393357 NPVFQ9HCQ7 196 aa13.51□□□□□ -0.25
PHTF1-205ENST00000393357 U3KQA8 63 aa13.51□□□□□ -0.25
PHTF1-205ENST00000393357 SRFP11831 508 aa13.51□□□□□ -0.25
PHTF1-205ENST00000393357 NPY1RP25929 384 aa13.51□□□□□ -0.25
PHTF1-205ENST00000393357 CTRLP40313 264 aa13.51□□□□□ -0.25
PHTF1-205ENST00000393357 PPOXP50336 477 aa13.51□□□□□ -0.25
PHTF1-205ENST00000393357 KLF3P57682 345 aaPredicted RBP13.51□□□□□ -0.25
PHTF1-205ENST00000393357 MOB1BQ7L9L4 216 aa13.51□□□□□ -0.25
PHTF1-205ENST00000393357 NABP2Q9BQ15 211 aa13.51□□□□□ -0.25
PHTF1-205ENST00000393357 TET2Q6N021 2002 aaPredicted RBP13.5□□□□□ -0.25
PHTF1-205ENST00000393357 A0A087X0K7 114 aa13.5□□□□□ -0.25
PHTF1-205ENST00000393357 MUC21A0A0G2JKD1 596 aa13.5□□□□□ -0.25
PHTF1-205ENST00000393357 MUC21A0A140T8X8 626 aa13.5□□□□□ -0.25
PHTF1-205ENST00000393357 GFRA3O60609 400 aa13.5□□□□□ -0.25
PHTF1-205ENST00000393357 TBC1D28Q2M2D7 210 aa13.5□□□□□ -0.25
PHTF1-205ENST00000393357 ZNF718Q3SXZ3 478 aa13.5□□□□□ -0.25
PHTF1-205ENST00000393357 MUC21Q5SSG8 566 aa13.5□□□□□ -0.25
PHTF1-205ENST00000393357 ABHD17BQ5VST6 288 aa13.5□□□□□ -0.25
PHTF1-205ENST00000393357 SPEM1Q8N4L4 309 aa13.5□□□□□ -0.25
PHTF1-205ENST00000393357 TMEM116Q8NCL8 245 aa13.5□□□□□ -0.25
PHTF1-205ENST00000393357 OR5B3Q8NH48 314 aa13.5□□□□□ -0.25
PHTF1-205ENST00000393357 SH2D2AQ9NP31 389 aa13.5□□□□□ -0.25
PHTF1-205ENST00000393357 OOEPA6NGQ2 149 aa13.5□□□□□ -0.25
PHTF1-205ENST00000393357 GGTLC3B5MD39 225 aa13.5□□□□□ -0.25
PHTF1-205ENST00000393357 MT-CO2P00403 227 aa13.5□□□□□ -0.25
PHTF1-205ENST00000393357 TNFSF4P23510 183 aa13.5□□□□□ -0.25
PHTF1-205ENST00000393357 RAB31Q13636 194 aa13.5□□□□□ -0.25
PHTF1-205ENST00000393357 WFDC8Q8IUA0 241 aa13.5□□□□□ -0.25
PHTF1-205ENST00000393357 PIGBOS1A0A0B4J2F0 54 aa13.49□□□□□ -0.25
PHTF1-205ENST00000393357 OPRK1P41145 380 aa13.49□□□□□ -0.25
PHTF1-205ENST00000393357 CLDN18P56856 261 aa13.49□□□□□ -0.25
PHTF1-205ENST00000393357 C18orf32Q8TCD1 76 aa13.49□□□□□ -0.25
PHTF1-205ENST00000393357 NANOS1Q8WY41 292 aaKnown RBP13.49□□□□□ -0.25
PHTF1-205ENST00000393357 BOKQ9UMX3 212 aaPredicted RBP13.49□□□□□ -0.25
PHTF1-205ENST00000393357 PIEZO2Q9H5I5 2752 aa13.49□□□□□ -0.25
PHTF1-205ENST00000393357 ZNF134P52741 427 aa13.49□□□□□ -0.25
PHTF1-205ENST00000393357 SRSF7Q16629 238 aaKnown RBP eCLIP13.49□□□□□ -0.25
PHTF1-205ENST00000393357 PPP1R32Q7Z5V6 425 aa13.49□□□□□ -0.25
PHTF1-205ENST00000393357 TMEM105Q8N8V8 129 aa13.49□□□□□ -0.25
PHTF1-205ENST00000393357 OR10W1Q8NGF6 305 aa13.49□□□□□ -0.25
PHTF1-205ENST00000393357 SFXN3Q9BWM7 321 aa13.49□□□□□ -0.25
PHTF1-205ENST00000393357 ZNF891A8MT65 544 aaPredicted RBP13.49□□□□□ -0.25
PHTF1-205ENST00000393357 UBE2L3P68036 154 aaKnown RBP13.49□□□□□ -0.25
PHTF1-205ENST00000393357 CX3CL1P78423 397 aa13.49□□□□□ -0.25
PHTF1-205ENST00000393357 SAPCD1Q5SSQ6 148 aa13.49□□□□□ -0.25
PHTF1-205ENST00000393357 PCED1AQ9H1Q7 454 aa13.49□□□□□ -0.25
PHTF1-205ENST00000393357 A0A1W2PRD5 423 aa13.48□□□□□ -0.25
PHTF1-205ENST00000393357 A0A1W2PRF3 423 aa13.48□□□□□ -0.25
PHTF1-205ENST00000393357 A0A1W2PRM7 423 aa13.48□□□□□ -0.25
PHTF1-205ENST00000393357 C10orf142B7Z368 130 aa13.48□□□□□ -0.25
PHTF1-205ENST00000393357 CXCL12P48061 93 aa13.48□□□□□ -0.25
PHTF1-205ENST00000393357 REG1BP48304 166 aa13.48□□□□□ -0.25
PHTF1-205ENST00000393357 FXYD7P58549 80 aa13.48□□□□□ -0.25
PHTF1-205ENST00000393357 MBNL3Q9NUK0 354 aaKnown RBP13.48□□□□□ -0.25
PHTF1-205ENST00000393357 IL19Q9UHD0 177 aa13.48□□□□□ -0.25
PHTF1-205ENST00000393357 OR4C46A6NHA9 309 aa13.48□□□□□ -0.25
PHTF1-205ENST00000393357 GOSR1O95249 250 aa13.48□□□□□ -0.25
PHTF1-205ENST00000393357 Q0VG73 95 aa13.48□□□□□ -0.25
PHTF1-205ENST00000393357 LRRC29Q8WV35 223 aa13.48□□□□□ -0.25
PHTF1-205ENST00000393357 GNB1LQ9BYB4 327 aa13.48□□□□□ -0.25
PHTF1-205ENST00000393357 WDR54Q9H977 334 aa13.48□□□□□ -0.25
PHTF1-205ENST00000393357 LSM4Q9Y4Z0 139 aaKnown RBP13.48□□□□□ -0.25
PHTF1-205ENST00000393357 AMY1AP04745 511 aa13.47□□□□□ -0.25
PHTF1-205ENST00000393357 DUTP33316 252 aaKnown RBP13.47□□□□□ -0.25
PHTF1-205ENST00000393357 C1orf229Q6ZS94 237 aaPredicted RBP13.47□□□□□ -0.25
PHTF1-205ENST00000393357 TMEM251Q8N6I4 163 aa13.47□□□□□ -0.25
PHTF1-205ENST00000393357 OR2Z1Q8NG97 314 aa13.47□□□□□ -0.25
PHTF1-205ENST00000393357 COL5A1P20908 1838 aaPredicted RBP13.47□□□□□ -0.25
PHTF1-205ENST00000393357 LOC102723996A0A087X1L8 192 aa13.47□□□□□ -0.25
PHTF1-205ENST00000393357 FAM181BA6NEQ2 426 aa13.47□□□□□ -0.25
PHTF1-205ENST00000393357 RPL19P84098 196 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms