RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 TRAV38-1A0A0B4J264 116 aa16.24■□□□□ 0.19
CSNK1D-203ENST00000392334 SLC31A2O15432 143 aa16.24■□□□□ 0.19
CSNK1D-203ENST00000392334 RBFOX2O43251 390 aaKnown RBP eCLIP16.24■□□□□ 0.193e-9■■■■■ 32.5
CSNK1D-203ENST00000392334 LYPD2Q6UXB3 125 aa16.24■□□□□ 0.19
CSNK1D-203ENST00000392334 CELSR2Q9HCU4 2923 aa16.24■□□□□ 0.19
CSNK1D-203ENST00000392334 A0A1W2PPV4 95 aa16.24■□□□□ 0.19
CSNK1D-203ENST00000392334 A6NNC1 897 aa16.24■□□□□ 0.19
CSNK1D-203ENST00000392334 PRSS46E5RG02 174 aa16.24■□□□□ 0.19
CSNK1D-203ENST00000392334 DEFA4P12838 97 aa16.24■□□□□ 0.19
CSNK1D-203ENST00000392334 NDUFB7P17568 137 aa16.24■□□□□ 0.19
CSNK1D-203ENST00000392334 CHRNA7P36544 502 aa16.24■□□□□ 0.19
CSNK1D-203ENST00000392334 VDAC2P45880 294 aaPredicted RBP16.24■□□□□ 0.19
CSNK1D-203ENST00000392334 ATP5G3P48201 142 aa16.24■□□□□ 0.19
CSNK1D-203ENST00000392334 CLEC12BQ2HXU8 276 aa16.24■□□□□ 0.19
CSNK1D-203ENST00000392334 FAM78BQ5VT40 261 aa16.24■□□□□ 0.19
CSNK1D-203ENST00000392334 GBGT1Q8N5D6 347 aa16.24■□□□□ 0.19
CSNK1D-203ENST00000392334 NDUFAF3Q9BU61 184 aa16.24■□□□□ 0.19
CSNK1D-203ENST00000392334 USF3Q68DE3 2245 aa16.23■□□□□ 0.19
CSNK1D-203ENST00000392334 LINC00205P59089 165 aa16.23■□□□□ 0.19
CSNK1D-203ENST00000392334 TAS2R60P59551 318 aa16.23■□□□□ 0.19
CSNK1D-203ENST00000392334 TREML4Q6UXN2 200 aa16.23■□□□□ 0.19
CSNK1D-203ENST00000392334 UBTD1Q9HAC8 227 aa16.23■□□□□ 0.19
CSNK1D-203ENST00000392334 CBLN4Q9NTU7 201 aa16.23■□□□□ 0.19
CSNK1D-203ENST00000392334 JPT1Q9UK76 154 aa16.23■□□□□ 0.19
CSNK1D-203ENST00000392334 PXMP4Q9Y6I8 212 aa16.23■□□□□ 0.19
CSNK1D-203ENST00000392334 A0A1B0GV90 55 aa16.23■□□□□ 0.19
CSNK1D-203ENST00000392334 PROP1O75360 226 aa16.23■□□□□ 0.19
CSNK1D-203ENST00000392334 STAG3L2P0CL84 134 aa16.23■□□□□ 0.19
CSNK1D-203ENST00000392334 STAG3L3P0CL85 134 aa16.23■□□□□ 0.19
CSNK1D-203ENST00000392334 GPR12P47775 334 aa16.23■□□□□ 0.19
CSNK1D-203ENST00000392334 CR1LQ2VPA4 569 aa16.23■□□□□ 0.19
CSNK1D-203ENST00000392334 CSMD2Q7Z408 3487 aa16.22■□□□□ 0.19
CSNK1D-203ENST00000392334 FCN3O75636 299 aa16.22■□□□□ 0.19
CSNK1D-203ENST00000392334 NDUFB4O95168 129 aa16.22■□□□□ 0.19
CSNK1D-203ENST00000392334 GCSAMLQ5JQS6 135 aa16.22■□□□□ 0.19
CSNK1D-203ENST00000392334 GCN1Q92616 2671 aaKnown RBP16.22■□□□□ 0.19
CSNK1D-203ENST00000392334 DOPEY2Q9Y3R5 2298 aa16.21■□□□□ 0.19
CSNK1D-203ENST00000392334 YPEL1O60688 119 aa16.21■□□□□ 0.19
CSNK1D-203ENST00000392334 CXorf1O96002 111 aa16.21■□□□□ 0.19
CSNK1D-203ENST00000392334 UTF1Q5T230 341 aa16.21■□□□□ 0.19
CSNK1D-203ENST00000392334 PRAMEF5Q5TYX0 476 aa16.21■□□□□ 0.19
CSNK1D-203ENST00000392334 CST9LP1Q5W188 147 aa16.21■□□□□ 0.19
CSNK1D-203ENST00000392334 OR4A16Q8NH70 328 aa16.21■□□□□ 0.19
CSNK1D-203ENST00000392334 YPEL2Q96QA6 119 aa16.21■□□□□ 0.19
CSNK1D-203ENST00000392334 SLC25A10Q9UBX3 287 aaPredicted RBP16.21■□□□□ 0.19
CSNK1D-203ENST00000392334 NKX6-3A6NJ46 265 aa16.21■□□□□ 0.18
CSNK1D-203ENST00000392334 FCGR3BO75015 233 aa16.21■□□□□ 0.18
CSNK1D-203ENST00000392334 UBE2G2P60604 165 aa16.21■□□□□ 0.18
CSNK1D-203ENST00000392334 IQCJQ1A5X6 159 aa16.21■□□□□ 0.18
CSNK1D-203ENST00000392334 MORN2Q502X0 79 aa16.21■□□□□ 0.18
CSNK1D-203ENST00000392334 SFRP2Q96HF1 295 aa16.21■□□□□ 0.18
CSNK1D-203ENST00000392334 MGST2Q99735 147 aa16.21■□□□□ 0.18
CSNK1D-203ENST00000392334 GGTLC1Q9BX51 225 aa16.21■□□□□ 0.18
CSNK1D-203ENST00000392334 TRAPPC1Q9Y5R8 145 aa16.21■□□□□ 0.18
CSNK1D-203ENST00000392334 A0A0U1RQK1 487 aa16.2■□□□□ 0.18
CSNK1D-203ENST00000392334 ZNF320A2RRD8 509 aa16.2■□□□□ 0.18
CSNK1D-203ENST00000392334 CDKN1AP38936 164 aa16.2■□□□□ 0.18
CSNK1D-203ENST00000392334 KIR2DS2P43631 304 aa16.2■□□□□ 0.18
CSNK1D-203ENST00000392334 PPOXP50336 477 aa16.2■□□□□ 0.18
CSNK1D-203ENST00000392334 C11orf71Q6IPW1 123 aa16.2■□□□□ 0.18
CSNK1D-203ENST00000392334 OR5T1Q8NG75 326 aa16.2■□□□□ 0.18
CSNK1D-203ENST00000392334 LEAP2Q969E1 77 aa16.2■□□□□ 0.18
CSNK1D-203ENST00000392334 DOCK11Q5JSL3 2073 aa16.19■□□□□ 0.18
CSNK1D-203ENST00000392334 TRAV9-1A0A075B6T8 112 aa16.19■□□□□ 0.18
CSNK1D-203ENST00000392334 MDFIC2A0A1B0GVS7 189 aa16.19■□□□□ 0.18
CSNK1D-203ENST00000392334 COL8A1P27658 744 aa16.19■□□□□ 0.18
CSNK1D-203ENST00000392334 YPEL3P61236 119 aaPredicted RBP16.19■□□□□ 0.18
CSNK1D-203ENST00000392334 RELBQ01201 579 aa16.19■□□□□ 0.18
CSNK1D-203ENST00000392334 SPOCK3Q9BQ16 436 aa16.19■□□□□ 0.18
CSNK1D-203ENST00000392334 DERL1Q9BUN8 251 aa16.19■□□□□ 0.18
CSNK1D-203ENST00000392334 GNG12Q9UBI6 72 aa16.19■□□□□ 0.18
CSNK1D-203ENST00000392334 CTSZQ9UBR2 303 aa16.19■□□□□ 0.18
CSNK1D-203ENST00000392334 ZNF705GA8MUZ8 300 aaPredicted RBP16.19■□□□□ 0.18
CSNK1D-203ENST00000392334 ARL14EPLP0DKL9 152 aa16.19■□□□□ 0.18
CSNK1D-203ENST00000392334 ERVK-16P61578 105 aa16.19■□□□□ 0.18
CSNK1D-203ENST00000392334 PRSS8Q16651 343 aa16.19■□□□□ 0.18
CSNK1D-203ENST00000392334 TCF23Q7RTU1 214 aa16.19■□□□□ 0.18
CSNK1D-203ENST00000392334 MRPL41Q8IXM3 137 aaKnown RBP16.19■□□□□ 0.18
CSNK1D-203ENST00000392334 ZNF114Q8NC26 417 aa16.19■□□□□ 0.18
CSNK1D-203ENST00000392334 RAB1BQ9H0U4 201 aa16.19■□□□□ 0.18
CSNK1D-203ENST00000392334 HEYLQ9NQ87 328 aaPredicted RBP16.19■□□□□ 0.18
CSNK1D-203ENST00000392334 CALYQ9NYX4 217 aa16.19■□□□□ 0.18
CSNK1D-203ENST00000392334 LSM4Q9Y4Z0 139 aaKnown RBP16.19■□□□□ 0.18
CSNK1D-203ENST00000392334 F2RL2O00254 374 aa16.18■□□□□ 0.18
CSNK1D-203ENST00000392334 RRHO14718 337 aa16.18■□□□□ 0.18
CSNK1D-203ENST00000392334 SSX2Q16385 188 aa16.18■□□□□ 0.18
CSNK1D-203ENST00000392334 C17orf58Q2M2W7 97 aa16.18■□□□□ 0.18
CSNK1D-203ENST00000392334 H1FXQ92522 213 aaKnown RBP16.18■□□□□ 0.18
CSNK1D-203ENST00000392334 FAM234AQ9H0X4 552 aa16.18■□□□□ 0.18
CSNK1D-203ENST00000392334 PATZ1Q9HBE1 687 aaKnown RBP16.18■□□□□ 0.18
CSNK1D-203ENST00000392334 TRGV10A0A0A0MS01 117 aa16.18■□□□□ 0.18
CSNK1D-203ENST00000392334 ITGB1BP1O14713 200 aa16.18■□□□□ 0.18
CSNK1D-203ENST00000392334 FBN2P35556 2912 aa16.17■□□□□ 0.18
CSNK1D-203ENST00000392334 TRBV20OR9-2A0A075B6H5 130 aa16.17■□□□□ 0.18
CSNK1D-203ENST00000392334 M0R1X1 148 aa16.17■□□□□ 0.18
CSNK1D-203ENST00000392334 TNFRSF13BO14836 293 aaPredicted RBP16.17■□□□□ 0.18
CSNK1D-203ENST00000392334 NDUFS7O75251 213 aa16.17■□□□□ 0.18
CSNK1D-203ENST00000392334 MIC13Q5XKP0 118 aa16.17■□□□□ 0.18
CSNK1D-203ENST00000392334 SGMS2Q8NHU3 365 aa16.17■□□□□ 0.18
CSNK1D-203ENST00000392334 NPVFQ9HCQ7 196 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms