RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 HSD17B10Q99714 261 aaKnown RBP1.22□□□□□ -2.21
TRAV40-201ENST00000390467 PRADC1Q9BSG0 188 aa1.22□□□□□ -2.21
TRAV40-201ENST00000390467 PSMG3Q9BT73 122 aaPredicted RBP1.22□□□□□ -2.21
TRAV40-201ENST00000390467 TMEM147Q9BVK8 224 aa1.22□□□□□ -2.21
TRAV40-201ENST00000390467 TMEM133Q9H2Q1 129 aa1.22□□□□□ -2.21
TRAV40-201ENST00000390467 EFCAB1Q9HAE3 211 aa1.22□□□□□ -2.21
TRAV40-201ENST00000390467 CACYBPQ9HB71 228 aaKnown RBP1.22□□□□□ -2.21
TRAV40-201ENST00000390467 PARP11Q9NR21 331 aa1.22□□□□□ -2.21
TRAV40-201ENST00000390467 OR5AC2Q9NZP5 309 aa1.22□□□□□ -2.21
TRAV40-201ENST00000390467 TMEM216Q9P0N5 145 aa1.22□□□□□ -2.21
TRAV40-201ENST00000390467 METTL1Q9UBP6 276 aaKnown RBP1.22□□□□□ -2.21
TRAV40-201ENST00000390467 LINC00527Q9UJ94 153 aa1.22□□□□□ -2.21
TRAV40-201ENST00000390467 SCP2D1Q9UJQ7 156 aa1.22□□□□□ -2.21
TRAV40-201ENST00000390467 MCTS1Q9ULC4 181 aaKnown RBP1.22□□□□□ -2.21
TRAV40-201ENST00000390467 HSPE1-MOB4S4R3N1 261 aa1.22□□□□□ -2.21
TRAV40-201ENST00000390467 AKAP11Q9UKA4 1901 aa1.22□□□□□ -2.21
TRAV40-201ENST00000390467 KMT2EQ8IZD2 1858 aa1.22□□□□□ -2.21
TRAV40-201ENST00000390467 CDK5RAP2Q96SN8 1893 aa1.22□□□□□ -2.21
TRAV40-201ENST00000390467 PLCH2O75038 1416 aa1.22□□□□□ -2.21
TRAV40-201ENST00000390467 NPHP4O75161 1426 aaPredicted RBP1.22□□□□□ -2.21
TRAV40-201ENST00000390467 FOCADQ5VW36 1801 aa1.22□□□□□ -2.21
TRAV40-201ENST00000390467 FANCMQ8IYD8 2048 aa1.22□□□□□ -2.21
TRAV40-201ENST00000390467 RTL1A6NKG5 1358 aa1.21□□□□□ -2.21
TRAV40-201ENST00000390467 ANKRD36BQ8N2N9 1353 aa1.21□□□□□ -2.21
TRAV40-201ENST00000390467 EIF4G3O43432 1585 aaKnown RBP1.21□□□□□ -2.22
TRAV40-201ENST00000390467 MYH7P12883 1935 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 MED14O60244 1454 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 BCL9LQ86UU0 1499 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 MAGI1Q96QZ7 1491 aaPredicted RBP1.21□□□□□ -2.22
TRAV40-201ENST00000390467 TRBV19A0A075B6N1 114 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 IGKV1-27A0A075B6S5 117 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 SMIM26A0A096LP01 95 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 IGHV2-26A0A0B4J1V2 119 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 TRAV5A0A0B4J249 113 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 IGHV1-69DA0A0B4J2H0 117 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 IGKV1-8A0A0C4DH67 115 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 LOC107984640A0A0U1RRK4 108 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 LOC389332A0A1B0GUA5 103 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 SPAARA0A1B0GVQ0 90 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 TMEM212A6NML5 194 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 IFITM5A6NNB3 132 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 TMEM250H0YL14 139 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 H3BQF6 201 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 J3QQQ9 107 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 DNASE2O00115 360 aaPredicted RBP1.21□□□□□ -2.22
TRAV40-201ENST00000390467 PGLYRP1O75594 196 aaPredicted RBP1.21□□□□□ -2.22
TRAV40-201ENST00000390467 GYPCP04921 128 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 GPX1P07203 203 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 OR4Q2P0C623 313 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 P0DMU3 169 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 FAM231AP0DMU4 169 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 FAM231CP0DMU5 169 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 LINC00694P0DN24 101 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 BCL2P10415 239 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 NTF3P20783 257 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 PPIBP23284 216 aaKnown RBP1.21□□□□□ -2.22
TRAV40-201ENST00000390467 GADD45AP24522 165 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 BRS3P32247 399 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 GABRA3P34903 492 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 OPRK1P41145 380 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 CCR2P41597 374 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 LPAR6P43657 344 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 MP68P56378 58 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 TAS2R46P59540 309 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 TAS2R20P59543 309 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 COPZ1P61923 177 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 RHEBQ15382 184 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 MMDQ15546 238 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 CST6Q15828 149 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 CCL15Q16663 113 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 FBXL19-AS1Q494R0 122 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 CLLU1OSQ5K130 101 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 COL5A1-AS1Q5SY13 56 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 AMMECR1LQ6DCA0 310 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 WDR59Q6PJI9 974 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 Q6Q795 121 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 GLIPR1L1Q6UWM5 242 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 ZNF767PQ75MW2 155 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 PRNTQ86SH4 94 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 YIPF7Q8N8F6 280 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 TMEM75Q8N9X5 138 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 OR52R1Q8NGF1 315 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 OR5A2Q8NGI9 324 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 OR4C16Q8NGL9 310 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 OR2T27Q8NH04 317 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 OR51H1Q8NH63 302 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 SLC25A40Q8TBP6 338 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 RXFP4Q8TDU9 374 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 LMX1AQ8TE12 382 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 RTN4IP1Q8WWV3 396 aaPredicted RBP1.21□□□□□ -2.22
TRAV40-201ENST00000390467 TMEM106AQ96A25 262 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 TMEM159Q96B96 161 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 SLAMF6Q96DU3 332 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 KCNS1Q96KK3 526 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 DERL3Q96Q80 235 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 NMNAT3Q96T66 252 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 MRPL57Q9BQC6 102 aaKnown RBP1.21□□□□□ -2.22
TRAV40-201ENST00000390467 TM2D3Q9BRN9 247 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 SFXN3Q9BWM7 321 aa1.21□□□□□ -2.22
TRAV40-201ENST00000390467 SAMD10Q9BYL1 202 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms