RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 SRD5A3Q9H8P0 318 aa10.84□□□□□ -0.67
PTPRN2-202ENST00000389416 TRAV14DV4A0A0A6YYC5 116 aa10.84□□□□□ -0.67
PTPRN2-202ENST00000389416 IGHV3-11P01762 117 aa10.84□□□□□ -0.67
PTPRN2-202ENST00000389416 ARL14EPLP0DKL9 152 aa10.84□□□□□ -0.67
PTPRN2-202ENST00000389416 IFITM2Q01629 132 aa10.84□□□□□ -0.67
PTPRN2-202ENST00000389416 RBPMS2Q6ZRY4 209 aaKnown RBP10.84□□□□□ -0.67
PTPRN2-202ENST00000389416 TXN2Q99757 166 aa10.84□□□□□ -0.67
PTPRN2-202ENST00000389416 FOXA2Q9Y261 457 aaPredicted RBP10.84□□□□□ -0.67
PTPRN2-202ENST00000389416 PTPRSQ13332 1948 aa10.84□□□□□ -0.67
PTPRN2-202ENST00000389416 A0A1W2PS18 150 aa10.84□□□□□ -0.67
PTPRN2-202ENST00000389416 SLC31A2O15432 143 aa10.84□□□□□ -0.67
PTPRN2-202ENST00000389416 HIST1H1EP10412 219 aaKnown RBP10.84□□□□□ -0.67
PTPRN2-202ENST00000389416 FABP4P15090 132 aa10.84□□□□□ -0.67
PTPRN2-202ENST00000389416 IGFBP2P18065 325 aa10.84□□□□□ -0.67
PTPRN2-202ENST00000389416 RPL30P62888 115 aaKnown RBP10.84□□□□□ -0.67
PTPRN2-202ENST00000389416 LRRC75BQ2VPJ9 315 aa10.84□□□□□ -0.67
PTPRN2-202ENST00000389416 C10orf55Q5SWW7 151 aa10.84□□□□□ -0.67
PTPRN2-202ENST00000389416 C5orf17Q8NAS9 161 aa10.84□□□□□ -0.67
PTPRN2-202ENST00000389416 C12orf57Q99622 126 aa10.84□□□□□ -0.67
PTPRN2-202ENST00000389416 LINC00527Q9UJ94 153 aa10.84□□□□□ -0.67
PTPRN2-202ENST00000389416 UFC1Q9Y3C8 167 aa10.84□□□□□ -0.67
PTPRN2-202ENST00000389416 RNF222A6NCQ9 220 aa10.84□□□□□ -0.67
PTPRN2-202ENST00000389416 RPEL1Q2QD12 228 aa10.84□□□□□ -0.67
PTPRN2-202ENST00000389416 MRPL54Q6P161 138 aaKnown RBP10.84□□□□□ -0.67
PTPRN2-202ENST00000389416 BRD3OSQ6XYD6 125 aa10.84□□□□□ -0.67
PTPRN2-202ENST00000389416 EEF1AKMT3Q96AZ1 226 aa10.84□□□□□ -0.67
PTPRN2-202ENST00000389416 WNT10AQ9GZT5 417 aa10.84□□□□□ -0.67
PTPRN2-202ENST00000389416 H0YIZ8 118 aa10.83□□□□□ -0.68
PTPRN2-202ENST00000389416 GPR183P32249 361 aa10.83□□□□□ -0.68
PTPRN2-202ENST00000389416 ATP5IP56385 69 aaPredicted RBP10.83□□□□□ -0.68
PTPRN2-202ENST00000389416 ZMAT5Q9UDW3 170 aaKnown RBP10.83□□□□□ -0.68
PTPRN2-202ENST00000389416 NCOA6Q14686 2063 aaPredicted RBP10.83□□□□□ -0.68
PTPRN2-202ENST00000389416 DOCK11Q5JSL3 2073 aa10.83□□□□□ -0.68
PTPRN2-202ENST00000389416 CD55P08174 381 aa10.83□□□□□ -0.68
PTPRN2-202ENST00000389416 NPPCP23582 126 aa10.83□□□□□ -0.68
PTPRN2-202ENST00000389416 SUPT4H1P63272 117 aaKnown RBP10.83□□□□□ -0.68
PTPRN2-202ENST00000389416 TFF3Q07654 80 aa10.83□□□□□ -0.68
PTPRN2-202ENST00000389416 C18orf12Q96KH6 178 aa10.83□□□□□ -0.68
PTPRN2-202ENST00000389416 C21orf62Q9NYP8 219 aa10.83□□□□□ -0.68
PTPRN2-202ENST00000389416 DKK4Q9UBT3 224 aa10.83□□□□□ -0.68
PTPRN2-202ENST00000389416 PRB1P04280 392 aa10.83□□□□□ -0.68
PTPRN2-202ENST00000389416 OR9G9P0C7N8 305 aa10.83□□□□□ -0.68
PTPRN2-202ENST00000389416 STPG2Q8N412 459 aa10.83□□□□□ -0.68
PTPRN2-202ENST00000389416 GATAD1Q8WUU5 269 aa10.83□□□□□ -0.68
PTPRN2-202ENST00000389416 RNF126Q9BV68 326 aa10.83□□□□□ -0.68
PTPRN2-202ENST00000389416 RBFOX2O43251 390 aaKnown RBP eCLIP10.82□□□□□ -0.684e-7■■■■■ 99.9
PTPRN2-202ENST00000389416 ID1P41134 155 aa10.82□□□□□ -0.68
PTPRN2-202ENST00000389416 ASCL4Q6XD76 172 aa10.82□□□□□ -0.68
PTPRN2-202ENST00000389416 SIGLECL1Q8N7X8 197 aa10.82□□□□□ -0.68
PTPRN2-202ENST00000389416 SLC25A33Q9BSK2 321 aa10.82□□□□□ -0.68
PTPRN2-202ENST00000389416 IGLV1-44P01699 117 aa10.82□□□□□ -0.68
PTPRN2-202ENST00000389416 DANCRP0C864 163 aa10.82□□□□□ -0.68
PTPRN2-202ENST00000389416 TM4SF20Q53R12 229 aa10.82□□□□□ -0.68
PTPRN2-202ENST00000389416 DMRTA2Q96SC8 542 aa10.82□□□□□ -0.68
PTPRN2-202ENST00000389416 NPCDR1Q9BY65 106 aa10.82□□□□□ -0.68
PTPRN2-202ENST00000389416 IL6RP08887 468 aaPredicted RBP10.82□□□□□ -0.68
PTPRN2-202ENST00000389416 VMO1Q7Z5L0 202 aa10.82□□□□□ -0.68
PTPRN2-202ENST00000389416 ZNF738Q8NE65 137 aa10.82□□□□□ -0.68
PTPRN2-202ENST00000389416 OR51M1Q9H341 326 aa10.82□□□□□ -0.68
PTPRN2-202ENST00000389416 ALPK3Q96L96 1907 aa10.82□□□□□ -0.68
PTPRN2-202ENST00000389416 IGHV3-66A0A0C4DH42 116 aa10.82□□□□□ -0.68
PTPRN2-202ENST00000389416 C15orf61A6NNL5 157 aa10.82□□□□□ -0.68
PTPRN2-202ENST00000389416 HIST1H1BP16401 226 aaKnown RBP10.82□□□□□ -0.68
PTPRN2-202ENST00000389416 ZNF418Q8TF45 676 aaPredicted RBP10.82□□□□□ -0.68
PTPRN2-202ENST00000389416 RARRES2Q99969 163 aa10.82□□□□□ -0.68
PTPRN2-202ENST00000389416 TMPRSS5Q9H3S3 457 aa10.82□□□□□ -0.68
PTPRN2-202ENST00000389416 RPL7P18124 248 aaKnown RBP10.81□□□□□ -0.68
PTPRN2-202ENST00000389416 CYP2G1PQ6ZSU1 146 aa10.81□□□□□ -0.68
PTPRN2-202ENST00000389416 WDR86Q86TI4 376 aa10.81□□□□□ -0.68
PTPRN2-202ENST00000389416 TMEM219Q86XT9 240 aa10.81□□□□□ -0.68
PTPRN2-202ENST00000389416 OR4B1Q8NGF8 309 aa10.81□□□□□ -0.68
PTPRN2-202ENST00000389416 RCC1LQ96I51 464 aaKnown RBP10.81□□□□□ -0.68
PTPRN2-202ENST00000389416 ID3Q02535 119 aa10.81□□□□□ -0.68
PTPRN2-202ENST00000389416 TMEM78Q5T7P6 136 aa10.81□□□□□ -0.68
PTPRN2-202ENST00000389416 MAPK1IP1LQ8NDC0 245 aa10.81□□□□□ -0.68
PTPRN2-202ENST00000389416 OR2D3Q8NGH3 330 aa10.81□□□□□ -0.68
PTPRN2-202ENST00000389416 C1orf147Q96MC9 270 aaPredicted RBP10.81□□□□□ -0.68
PTPRN2-202ENST00000389416 DUX5Q96PT3 197 aa10.81□□□□□ -0.68
PTPRN2-202ENST00000389416 B4DSR2 109 aa10.81□□□□□ -0.68
PTPRN2-202ENST00000389416 FAM74A3Q4VXF1 159 aa10.81□□□□□ -0.68
PTPRN2-202ENST00000389416 FA2HQ7L5A8 372 aa10.81□□□□□ -0.68
PTPRN2-202ENST00000389416 LINC00305Q7Z4B0 112 aa10.81□□□□□ -0.68
PTPRN2-202ENST00000389416 LHFPL5Q8TAF8 219 aa10.81□□□□□ -0.68
PTPRN2-202ENST00000389416 ABCA2Q9BZC7 2435 aa10.81□□□□□ -0.68
PTPRN2-202ENST00000389416 PMCHP20382 165 aa10.81□□□□□ -0.68
PTPRN2-202ENST00000389416 LAMTOR1Q6IAA8 161 aa10.81□□□□□ -0.68
PTPRN2-202ENST00000389416 OR10W1Q8NGF6 305 aa10.81□□□□□ -0.68
PTPRN2-202ENST00000389416 TNFRSF14Q92956 283 aa10.81□□□□□ -0.68
PTPRN2-202ENST00000389416 ELOA3CA0A087WX78 387 aaPredicted RBP10.8□□□□□ -0.68
PTPRN2-202ENST00000389416 A6NNC1 897 aa10.8□□□□□ -0.68
PTPRN2-202ENST00000389416 CSN3P07498 182 aa10.8□□□□□ -0.68
PTPRN2-202ENST00000389416 CRYBB3P26998 211 aa10.8□□□□□ -0.68
PTPRN2-202ENST00000389416 SRSF7Q16629 238 aaKnown RBP eCLIP10.8□□□□□ -0.684e-7■■■■■ 29.1
PTPRN2-202ENST00000389416 CLEC19AQ6UXS0 136 aa10.8□□□□□ -0.68
PTPRN2-202ENST00000389416 ZNF586Q9NXT0 402 aa10.8□□□□□ -0.68
PTPRN2-202ENST00000389416 DSCR9P59020 149 aa10.8□□□□□ -0.68
PTPRN2-202ENST00000389416 HERPUD1Q15011 391 aa10.8□□□□□ -0.68
PTPRN2-202ENST00000389416 NOL4LQ96MY1 436 aaPredicted RBP10.8□□□□□ -0.68
PTPRN2-202ENST00000389416 PSMG3Q9BT73 122 aaPredicted RBP10.8□□□□□ -0.68
PTPRN2-202ENST00000389416 RELQ04864 619 aaPredicted RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms