RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 HYPMO75409 117 aa10.99□□□□□ -0.65
TRAPPC9-201ENST00000389328 NRN1LQ496H8 165 aa10.99□□□□□ -0.65
TRAPPC9-201ENST00000389328 UBALD2Q8IYN6 164 aa10.99□□□□□ -0.65
TRAPPC9-201ENST00000389328 LPAR2Q9HBW0 351 aa10.99□□□□□ -0.65
TRAPPC9-201ENST00000389328 RBFOX2O43251 390 aaKnown RBP eCLIP10.98□□□□□ -0.652e-6■■■■■ 28.3
TRAPPC9-201ENST00000389328 KLF7O75840 302 aaPredicted RBP10.98□□□□□ -0.65
TRAPPC9-201ENST00000389328 RPEQ96AT9 228 aa10.98□□□□□ -0.65
TRAPPC9-201ENST00000389328 SEPSECSQ9HD40 501 aaKnown RBP10.98□□□□□ -0.65
TRAPPC9-201ENST00000389328 PPIAL4AQ9Y536 164 aa10.98□□□□□ -0.65
TRAPPC9-201ENST00000389328 LOC102723996A0A087X1L8 192 aa10.98□□□□□ -0.65
TRAPPC9-201ENST00000389328 CLEC3BP05452 202 aa10.98□□□□□ -0.65
TRAPPC9-201ENST00000389328 NPSP0C0P6 89 aa10.98□□□□□ -0.65
TRAPPC9-201ENST00000389328 SRSF7Q16629 238 aaKnown RBP eCLIP10.98□□□□□ -0.65
TRAPPC9-201ENST00000389328 ZNF430Q9H8G1 570 aaPredicted RBP10.98□□□□□ -0.65
TRAPPC9-201ENST00000389328 TRAV9-1A0A075B6T8 112 aa10.98□□□□□ -0.65
TRAPPC9-201ENST00000389328 IFNL4K9M1U5 179 aa10.98□□□□□ -0.65
TRAPPC9-201ENST00000389328 GGTLC1Q9BX51 225 aa10.98□□□□□ -0.65
TRAPPC9-201ENST00000389328 TNFRSF19Q9NS68 423 aa10.98□□□□□ -0.65
TRAPPC9-201ENST00000389328 HLA-DRB1P01911 266 aa10.97□□□□□ -0.65
TRAPPC9-201ENST00000389328 STAG3L2P0CL84 134 aa10.97□□□□□ -0.65
TRAPPC9-201ENST00000389328 STAG3L3P0CL85 134 aa10.97□□□□□ -0.65
TRAPPC9-201ENST00000389328 SFXN3Q9BWM7 321 aa10.97□□□□□ -0.65
TRAPPC9-201ENST00000389328 FOXI3A8MTJ6 420 aaPredicted RBP10.97□□□□□ -0.65
TRAPPC9-201ENST00000389328 DLL1O00548 723 aa10.97□□□□□ -0.65
TRAPPC9-201ENST00000389328 SELLP14151 372 aa10.97□□□□□ -0.65
TRAPPC9-201ENST00000389328 CDKN1AP38936 164 aa10.97□□□□□ -0.65
TRAPPC9-201ENST00000389328 RPL11P62913 178 aaKnown RBP10.97□□□□□ -0.65
TRAPPC9-201ENST00000389328 TBR1Q16650 682 aa10.97□□□□□ -0.65
TRAPPC9-201ENST00000389328 ATP1A1-AS1Q5TC04 95 aa10.97□□□□□ -0.65
TRAPPC9-201ENST00000389328 DIRC2Q96SL1 478 aa10.97□□□□□ -0.65
TRAPPC9-201ENST00000389328 CADP27708 2225 aa10.97□□□□□ -0.65
TRAPPC9-201ENST00000389328 MOSP00540 346 aa10.97□□□□□ -0.65
TRAPPC9-201ENST00000389328 ZNF146Q15072 292 aa10.97□□□□□ -0.65
TRAPPC9-201ENST00000389328 RASL11BQ9BPW5 248 aa10.97□□□□□ -0.65
TRAPPC9-201ENST00000389328 C21orf140B9A014 251 aa10.96□□□□□ -0.65
TRAPPC9-201ENST00000389328 SLC25A17O43808 307 aa10.96□□□□□ -0.65
TRAPPC9-201ENST00000389328 HIGD1CA8MV81 97 aa10.96□□□□□ -0.65
TRAPPC9-201ENST00000389328 FOXH1O75593 365 aa10.96□□□□□ -0.65
TRAPPC9-201ENST00000389328 ACP1P24666 158 aa10.96□□□□□ -0.65
TRAPPC9-201ENST00000389328 SELENOTP62341 195 aa10.96□□□□□ -0.65
TRAPPC9-201ENST00000389328 FOXF2Q12947 444 aa10.96□□□□□ -0.65
TRAPPC9-201ENST00000389328 SELENOKQ9Y6D0 94 aa10.96□□□□□ -0.65
TRAPPC9-201ENST00000389328 IGKV1-39P01597 117 aa10.96□□□□□ -0.66
TRAPPC9-201ENST00000389328 IGKV1D-39P04432 117 aa10.96□□□□□ -0.66
TRAPPC9-201ENST00000389328 LHX2P50458 406 aa10.96□□□□□ -0.66
TRAPPC9-201ENST00000389328 HBBP68871 147 aa10.96□□□□□ -0.66
TRAPPC9-201ENST00000389328 PEAR1Q5VY43 1037 aaPredicted RBP10.96□□□□□ -0.66
TRAPPC9-201ENST00000389328 SRSF12Q8WXF0 261 aaKnown RBP10.96□□□□□ -0.66
TRAPPC9-201ENST00000389328 GNB1LQ9BYB4 327 aa10.96□□□□□ -0.66
TRAPPC9-201ENST00000389328 CLEC5AQ9NY25 188 aa10.96□□□□□ -0.66
TRAPPC9-201ENST00000389328 ZNF785A8K8V0 405 aa10.96□□□□□ -0.66
TRAPPC9-201ENST00000389328 PRRG2O14669 202 aa10.96□□□□□ -0.66
TRAPPC9-201ENST00000389328 Q6ZS49 121 aa10.96□□□□□ -0.66
TRAPPC9-201ENST00000389328 FOXL2NBQ6ZUU3 175 aa10.96□□□□□ -0.66
TRAPPC9-201ENST00000389328 GCSAMQ8N6F7 178 aa10.96□□□□□ -0.66
TRAPPC9-201ENST00000389328 ZFP30Q9Y2G7 519 aa10.96□□□□□ -0.66
TRAPPC9-201ENST00000389328 CLDN18P56856 261 aa10.95□□□□□ -0.66
TRAPPC9-201ENST00000389328 SLC25A10Q9UBX3 287 aaPredicted RBP10.95□□□□□ -0.66
TRAPPC9-201ENST00000389328 IZUMO1RA6ND01 250 aa10.95□□□□□ -0.66
TRAPPC9-201ENST00000389328 NCBP2LA6PVI3 153 aaKnown RBP10.95□□□□□ -0.66
TRAPPC9-201ENST00000389328 FBLN7Q53RD9 439 aa10.95□□□□□ -0.66
TRAPPC9-201ENST00000389328 TMEM97Q5BJF2 176 aa10.95□□□□□ -0.66
TRAPPC9-201ENST00000389328 FAM53AQ6NSI3 398 aaPredicted RBP10.95□□□□□ -0.66
TRAPPC9-201ENST00000389328 HAPLN4Q86UW8 402 aa10.95□□□□□ -0.66
TRAPPC9-201ENST00000389328 PILRBQ9UKJ0 227 aa10.95□□□□□ -0.66
TRAPPC9-201ENST00000389328 ORM1P02763 201 aa10.95□□□□□ -0.66
TRAPPC9-201ENST00000389328 DUTP33316 252 aaKnown RBP10.95□□□□□ -0.66
TRAPPC9-201ENST00000389328 TCF24Q7RTU0 167 aa10.95□□□□□ -0.66
TRAPPC9-201ENST00000389328 LINC00305Q7Z4B0 112 aa10.95□□□□□ -0.66
TRAPPC9-201ENST00000389328 PPP1R14DQ9NXH3 145 aa10.95□□□□□ -0.66
TRAPPC9-201ENST00000389328 HIGD1AQ9Y241 93 aa10.95□□□□□ -0.66
TRAPPC9-201ENST00000389328 PEX7O00628 323 aa10.94□□□□□ -0.66
TRAPPC9-201ENST00000389328 C3orf79P0CE67 100 aa10.94□□□□□ -0.66
TRAPPC9-201ENST00000389328 CA7P43166 264 aa10.94□□□□□ -0.66
TRAPPC9-201ENST00000389328 C1orf174Q8IYL3 243 aa10.94□□□□□ -0.66
TRAPPC9-201ENST00000389328 MGST2Q99735 147 aa10.94□□□□□ -0.66
TRAPPC9-201ENST00000389328 F11RQ9Y624 299 aaKnown RBP10.94□□□□□ -0.66
TRAPPC9-201ENST00000389328 TTC28Q96AY4 2481 aa10.94□□□□□ -0.66
TRAPPC9-201ENST00000389328 TRAV9-2A0A087WT02 112 aa10.94□□□□□ -0.66
TRAPPC9-201ENST00000389328 TRAV3A0A0B4J244 114 aa10.94□□□□□ -0.66
TRAPPC9-201ENST00000389328 LINC00473A8K010 186 aa10.94□□□□□ -0.66
TRAPPC9-201ENST00000389328 PYYP10082 97 aa10.94□□□□□ -0.66
TRAPPC9-201ENST00000389328 LDLRAD2Q5SZI1 272 aa10.94□□□□□ -0.66
TRAPPC9-201ENST00000389328 NIT1Q86X76 327 aa10.94□□□□□ -0.66
TRAPPC9-201ENST00000389328 C1orf210Q8IVY1 113 aa10.94□□□□□ -0.66
TRAPPC9-201ENST00000389328 GRAMD2BQ96HH9 432 aa10.94□□□□□ -0.66
TRAPPC9-201ENST00000389328 OSTCQ9NRP0 149 aa10.94□□□□□ -0.66
TRAPPC9-201ENST00000389328 NCOA6Q14686 2063 aaPredicted RBP10.94□□□□□ -0.66
TRAPPC9-201ENST00000389328 INTS1Q8N201 2190 aaKnown RBP10.94□□□□□ -0.66
TRAPPC9-201ENST00000389328 ETV2O00321 342 aaPredicted RBP10.94□□□□□ -0.66
TRAPPC9-201ENST00000389328 LINC00614P0C842 121 aa10.94□□□□□ -0.66
TRAPPC9-201ENST00000389328 NTF4P34130 210 aa10.94□□□□□ -0.66
TRAPPC9-201ENST00000389328 GNG5P63218 68 aa10.94□□□□□ -0.66
TRAPPC9-201ENST00000389328 WDR31Q8NA23 367 aa10.94□□□□□ -0.66
TRAPPC9-201ENST00000389328 C19orf24Q9BVV8 132 aa10.94□□□□□ -0.66
TRAPPC9-201ENST00000389328 IFI27L2Q9H2X8 130 aa10.94□□□□□ -0.66
TRAPPC9-201ENST00000389328 TMEM108Q6UXF1 575 aa10.94□□□□□ -0.66
TRAPPC9-201ENST00000389328 GOLT1AQ6ZVE7 132 aa10.94□□□□□ -0.66
TRAPPC9-201ENST00000389328 ZNF114Q8NC26 417 aa10.94□□□□□ -0.66
TRAPPC9-201ENST00000389328 OR9G1Q8NH87 305 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms