RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 GTSF1LQ9H1H1 148 aa10.6□□□□□ -0.71
SRGAP3-202ENST00000383836 PSG4Q00888 419 aa10.6□□□□□ -0.71
SRGAP3-202ENST00000383836 FOXD3Q9UJU5 478 aaPredicted RBP10.6□□□□□ -0.71
SRGAP3-202ENST00000383836 DTX4Q9Y2E6 619 aa10.6□□□□□ -0.71
SRGAP3-202ENST00000383836 IGLV1-36A0A0B4J1U3 117 aa10.6□□□□□ -0.71
SRGAP3-202ENST00000383836 A0A0G2JLM5 398 aa10.6□□□□□ -0.71
SRGAP3-202ENST00000383836 DCAF10Q5QP82 559 aa10.6□□□□□ -0.71
SRGAP3-202ENST00000383836 ZNF721Q8TF20 911 aa10.6□□□□□ -0.71
SRGAP3-202ENST00000383836 DNASE2BQ8WZ79 361 aa10.6□□□□□ -0.71
SRGAP3-202ENST00000383836 LEPP41159 167 aa10.6□□□□□ -0.71
SRGAP3-202ENST00000383836 GUSBP11Q6P575 273 aa10.6□□□□□ -0.71
SRGAP3-202ENST00000383836 GTF3AQ92664 365 aaKnown RBP10.6□□□□□ -0.71
SRGAP3-202ENST00000383836 RTBDNQ9BSG5 229 aaPredicted RBP10.6□□□□□ -0.71
SRGAP3-202ENST00000383836 TCF19Q9Y242 345 aa10.6□□□□□ -0.71
SRGAP3-202ENST00000383836 FGF16O43320 207 aa10.59□□□□□ -0.71
SRGAP3-202ENST00000383836 NGFRP08138 427 aa10.59□□□□□ -0.71
SRGAP3-202ENST00000383836 ERVK11-1P61568 191 aa10.59□□□□□ -0.71
SRGAP3-202ENST00000383836 VKORC1L1Q8N0U8 176 aa10.59□□□□□ -0.71
SRGAP3-202ENST00000383836 NRTNQ99748 197 aa10.59□□□□□ -0.71
SRGAP3-202ENST00000383836 MS4A6AQ9H2W1 248 aa10.59□□□□□ -0.71
SRGAP3-202ENST00000383836 PGPEP1Q9NXJ5 209 aa10.59□□□□□ -0.71
SRGAP3-202ENST00000383836 FAM90A27PA6NNH2 459 aa10.59□□□□□ -0.71
SRGAP3-202ENST00000383836 IL6RP08887 468 aaPredicted RBP10.59□□□□□ -0.71
SRGAP3-202ENST00000383836 CITED1Q99966 193 aa10.59□□□□□ -0.71
SRGAP3-202ENST00000383836 LHFPL6Q9Y693 200 aa10.59□□□□□ -0.71
SRGAP3-202ENST00000383836 FBXW9Q5XUX1 488 aa10.59□□□□□ -0.71
SRGAP3-202ENST00000383836 ABHD12Q8N2K0 398 aa10.59□□□□□ -0.71
SRGAP3-202ENST00000383836 A0A1B0GTI1 187 aa10.59□□□□□ -0.71
SRGAP3-202ENST00000383836 IL11P20809 199 aa10.59□□□□□ -0.71
SRGAP3-202ENST00000383836 MPV17P39210 176 aa10.59□□□□□ -0.71
SRGAP3-202ENST00000383836 RAB9AP51151 201 aa10.59□□□□□ -0.71
SRGAP3-202ENST00000383836 DIRC2Q96SL1 478 aa10.59□□□□□ -0.71
SRGAP3-202ENST00000383836 AGFG2O95081 481 aa10.59□□□□□ -0.71
SRGAP3-202ENST00000383836 CD5P06127 495 aa10.59□□□□□ -0.71
SRGAP3-202ENST00000383836 PAX2Q02962 417 aa10.59□□□□□ -0.71
SRGAP3-202ENST00000383836 DMRTA2Q96SC8 542 aa10.59□□□□□ -0.71
SRGAP3-202ENST00000383836 RNF126Q9BV68 326 aa10.59□□□□□ -0.71
SRGAP3-202ENST00000383836 DLL3Q9NYJ7 618 aa10.59□□□□□ -0.71
SRGAP3-202ENST00000383836 KLF4O43474 513 aa10.59□□□□□ -0.71
SRGAP3-202ENST00000383836 GPX1P07203 203 aa10.59□□□□□ -0.71
SRGAP3-202ENST00000383836 LOXL3P58215 753 aa10.59□□□□□ -0.71
SRGAP3-202ENST00000383836 TFF3Q07654 80 aa10.59□□□□□ -0.71
SRGAP3-202ENST00000383836 ZNF479Q96JC4 524 aa10.59□□□□□ -0.71
SRGAP3-202ENST00000383836 ZNF385AQ96PM9 386 aaKnown RBP10.59□□□□□ -0.71
SRGAP3-202ENST00000383836 GAGE12BA1L429 117 aa10.59□□□□□ -0.71
SRGAP3-202ENST00000383836 COX6B1P14854 86 aa10.59□□□□□ -0.71
SRGAP3-202ENST00000383836 RNFT1Q5M7Z0 435 aa10.59□□□□□ -0.71
SRGAP3-202ENST00000383836 TPRX1Q8N7U7 411 aa10.59□□□□□ -0.71
SRGAP3-202ENST00000383836 WFDC6Q9BQY6 131 aa10.59□□□□□ -0.71
SRGAP3-202ENST00000383836 UMODP07911 640 aa10.58□□□□□ -0.72
SRGAP3-202ENST00000383836 MFAP4P55083 255 aa10.58□□□□□ -0.72
SRGAP3-202ENST00000383836 DPM2O94777 84 aa10.58□□□□□ -0.72
SRGAP3-202ENST00000383836 ATP5G3P48201 142 aa10.58□□□□□ -0.72
SRGAP3-202ENST00000383836 LPAR2Q9HBW0 351 aa10.58□□□□□ -0.72
SRGAP3-202ENST00000383836 ANKHD1Q8IWZ3 2542 aaKnown RBP10.58□□□□□ -0.72
SRGAP3-202ENST00000383836 SYNGR3O43761 229 aa10.58□□□□□ -0.72
SRGAP3-202ENST00000383836 IGHMP01871 453 aa10.58□□□□□ -0.72
SRGAP3-202ENST00000383836 TSPOP30536 169 aa10.58□□□□□ -0.72
SRGAP3-202ENST00000383836 MAGEA5P43359 124 aa10.58□□□□□ -0.72
SRGAP3-202ENST00000383836 FAM74A4Q5TZK3 123 aa10.58□□□□□ -0.72
SRGAP3-202ENST00000383836 WDR82Q6UXN9 313 aa10.58□□□□□ -0.72
SRGAP3-202ENST00000383836 FAM181BA6NEQ2 426 aa10.58□□□□□ -0.72
SRGAP3-202ENST00000383836 H3BRM9 83 aa10.58□□□□□ -0.72
SRGAP3-202ENST00000383836 DRD3P35462 400 aa10.58□□□□□ -0.72
SRGAP3-202ENST00000383836 CHODLQ9H9P2 273 aa10.58□□□□□ -0.72
SRGAP3-202ENST00000383836 KBTBD11-OT1A0A1B0GTJ5 212 aa10.58□□□□□ -0.72
SRGAP3-202ENST00000383836 SOX8P57073 446 aa10.58□□□□□ -0.72
SRGAP3-202ENST00000383836 RNASE7Q9H1E1 156 aaKnown RBP10.58□□□□□ -0.72
SRGAP3-202ENST00000383836 NR2C2APQ86WQ0 139 aa10.57□□□□□ -0.72
SRGAP3-202ENST00000383836 IGKV3D-15A0A087WSY6 115 aa10.57□□□□□ -0.72
SRGAP3-202ENST00000383836 IGKV3-15P01624 115 aa10.57□□□□□ -0.72
SRGAP3-202ENST00000383836 SLC25A47Q6Q0C1 308 aa10.57□□□□□ -0.72
SRGAP3-202ENST00000383836 OR9G4Q8NGQ1 327 aa10.57□□□□□ -0.72
SRGAP3-202ENST00000383836 COQ2Q96H96 371 aa10.57□□□□□ -0.72
SRGAP3-202ENST00000383836 SLC25A2Q9BXI2 301 aa10.57□□□□□ -0.72
SRGAP3-202ENST00000383836 TRBV24-1A0A075B6N3 115 aa10.57□□□□□ -0.72
SRGAP3-202ENST00000383836 SHISA3A0PJX4 238 aa10.57□□□□□ -0.72
SRGAP3-202ENST00000383836 PTGDSP41222 190 aa10.57□□□□□ -0.72
SRGAP3-202ENST00000383836 A0A0G2JK05 382 aa10.57□□□□□ -0.72
SRGAP3-202ENST00000383836 CD3EP07766 207 aa10.57□□□□□ -0.72
SRGAP3-202ENST00000383836 CCL3P10147 92 aa10.57□□□□□ -0.72
SRGAP3-202ENST00000383836 PTPRBP23467 1997 aa10.57□□□□□ -0.72
SRGAP3-202ENST00000383836 PLPPR1Q8TBJ4 325 aa10.57□□□□□ -0.72
SRGAP3-202ENST00000383836 ODAMA1E959 279 aa10.57□□□□□ -0.72
SRGAP3-202ENST00000383836 SLC25A53Q5H9E4 307 aa10.57□□□□□ -0.72
SRGAP3-202ENST00000383836 C1orf185Q5T7R7 199 aa10.57□□□□□ -0.72
SRGAP3-202ENST00000383836 SFTA2Q6UW10 78 aa10.57□□□□□ -0.72
SRGAP3-202ENST00000383836 TIMP4Q99727 224 aa10.57□□□□□ -0.72
SRGAP3-202ENST00000383836 CELA2BP08218 269 aaPredicted RBP10.57□□□□□ -0.72
SRGAP3-202ENST00000383836 MGST2Q99735 147 aa10.57□□□□□ -0.72
SRGAP3-202ENST00000383836 NPFFO15130 113 aa10.56□□□□□ -0.72
SRGAP3-202ENST00000383836 DRAM1Q8N682 238 aa10.56□□□□□ -0.72
SRGAP3-202ENST00000383836 PPIAL4EA0A075B759 164 aa10.56□□□□□ -0.72
SRGAP3-202ENST00000383836 REG1AP05451 166 aa10.56□□□□□ -0.72
SRGAP3-202ENST00000383836 CXCL1P09341 107 aa10.56□□□□□ -0.72
SRGAP3-202ENST00000383836 PPIAL4FP0DN26 164 aa10.56□□□□□ -0.72
SRGAP3-202ENST00000383836 PPIAL4AQ9Y536 164 aa10.56□□□□□ -0.72
SRGAP3-202ENST00000383836 ZIC3O60481 467 aa10.56□□□□□ -0.72
SRGAP3-202ENST00000383836 HBDP02042 147 aa10.56□□□□□ -0.72
SRGAP3-202ENST00000383836 PHF7Q9BWX1 381 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms