RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 NRN1LQ496H8 165 aa4.97□□□□□ -1.61
RFX3-204ENST00000382004 FAM57AQ8TBR7 257 aa4.97□□□□□ -1.61
RFX3-204ENST00000382004 RNASE7Q9H1E1 156 aaKnown RBP4.97□□□□□ -1.61
RFX3-204ENST00000382004 LAMTOR2Q9Y2Q5 125 aa4.97□□□□□ -1.61
RFX3-204ENST00000382004 LAMB1P07942 1786 aa4.96□□□□□ -1.61
RFX3-204ENST00000382004 IGHV3-73A0A0B4J1V6 119 aa4.96□□□□□ -1.61
RFX3-204ENST00000382004 ESDP10768 282 aa4.96□□□□□ -1.61
RFX3-204ENST00000382004 GATA2P23769 480 aaPredicted RBP4.96□□□□□ -1.61
RFX3-204ENST00000382004 HOXD3P31249 432 aaPredicted RBP4.96□□□□□ -1.61
RFX3-204ENST00000382004 CD300EQ496F6 205 aaPredicted RBP4.96□□□□□ -1.61
RFX3-204ENST00000382004 GAGE13Q4V321 117 aa4.96□□□□□ -1.61
RFX3-204ENST00000382004 TMEM54Q969K7 222 aa4.96□□□□□ -1.61
RFX3-204ENST00000382004 AMELYQ99218 206 aa4.96□□□□□ -1.61
RFX3-204ENST00000382004 ZNF703Q9H7S9 590 aaPredicted RBP4.96□□□□□ -1.61
RFX3-204ENST00000382004 CD33P20138 364 aa4.96□□□□□ -1.61
RFX3-204ENST00000382004 CCL1P22362 96 aa4.96□□□□□ -1.61
RFX3-204ENST00000382004 SAMD5Q5TGI4 173 aa4.96□□□□□ -1.61
RFX3-204ENST00000382004 RCC1LQ96I51 464 aaKnown RBP4.96□□□□□ -1.61
RFX3-204ENST00000382004 C7orf69Q9H7B7 122 aa4.96□□□□□ -1.61
RFX3-204ENST00000382004 LHX2P50458 406 aa4.96□□□□□ -1.62
RFX3-204ENST00000382004 IRF3Q14653 427 aa4.96□□□□□ -1.62
RFX3-204ENST00000382004 DEFB121Q5J5C9 76 aa4.96□□□□□ -1.62
RFX3-204ENST00000382004 MIR17HGQ75NE6 70 aa4.96□□□□□ -1.62
RFX3-204ENST00000382004 FAM168AQ92567 244 aa4.96□□□□□ -1.62
RFX3-204ENST00000382004 MAST2Q6P0Q8 1798 aa4.96□□□□□ -1.62
RFX3-204ENST00000382004 YLPM1P49750 1951 aaKnown RBP4.96□□□□□ -1.62
RFX3-204ENST00000382004 A0A087WX48 190 aa4.96□□□□□ -1.62
RFX3-204ENST00000382004 VENTXO95231 258 aa4.96□□□□□ -1.62
RFX3-204ENST00000382004 SLC25A47Q6Q0C1 308 aa4.96□□□□□ -1.62
RFX3-204ENST00000382004 COLCA1Q6ZS62 124 aa4.96□□□□□ -1.62
RFX3-204ENST00000382004 DUSP15Q9H1R2 295 aaPredicted RBP4.96□□□□□ -1.62
RFX3-204ENST00000382004 NRN1Q9NPD7 142 aa4.96□□□□□ -1.62
RFX3-204ENST00000382004 INTS1Q8N201 2190 aaKnown RBP4.96□□□□□ -1.62
RFX3-204ENST00000382004 ABCA1O95477 2261 aa4.96□□□□□ -1.62
RFX3-204ENST00000382004 B9A039 149 aa4.96□□□□□ -1.62
RFX3-204ENST00000382004 IGKCP01834 107 aa4.96□□□□□ -1.62
RFX3-204ENST00000382004 PEBP1P30086 187 aaKnown RBP4.96□□□□□ -1.62
RFX3-204ENST00000382004 ADMP35318 185 aa4.96□□□□□ -1.62
RFX3-204ENST00000382004 CDCP2Q5VXM1 449 aa4.96□□□□□ -1.62
RFX3-204ENST00000382004 MORN3Q6PF18 240 aaPredicted RBP4.96□□□□□ -1.62
RFX3-204ENST00000382004 CIARTQ8N365 385 aaPredicted RBP4.96□□□□□ -1.62
RFX3-204ENST00000382004 GSN-AS1Q9NRJ2 163 aa4.96□□□□□ -1.62
RFX3-204ENST00000382004 TCRBV4S1A1TA0A5B7 111 aa4.96□□□□□ -1.62
RFX3-204ENST00000382004 MSGN1A6NI15 193 aa4.96□□□□□ -1.62
RFX3-204ENST00000382004 ZP1P60852 638 aa4.96□□□□□ -1.62
RFX3-204ENST00000382004 LIMS2Q7Z4I7 341 aa4.96□□□□□ -1.62
RFX3-204ENST00000382004 PRDM13Q9H4Q3 707 aa4.96□□□□□ -1.62
RFX3-204ENST00000382004 DPM3Q9P2X0 92 aa4.96□□□□□ -1.62
RFX3-204ENST00000382004 A0A1W2PPV9 198 aa4.96□□□□□ -1.62
RFX3-204ENST00000382004 FABP5P3A8MUU1 101 aa4.96□□□□□ -1.62
RFX3-204ENST00000382004 SERF1AO75920 110 aa4.96□□□□□ -1.62
RFX3-204ENST00000382004 PRSS23O95084 383 aa4.96□□□□□ -1.62
RFX3-204ENST00000382004 GTF3AQ92664 365 aaKnown RBP4.96□□□□□ -1.62
RFX3-204ENST00000382004 FAM90A10PA6NDY2 464 aa4.96□□□□□ -1.62
RFX3-204ENST00000382004 FAM90A18PA6NE21 464 aa4.96□□□□□ -1.62
RFX3-204ENST00000382004 FAM90A16PA6NEW6 464 aa4.96□□□□□ -1.62
RFX3-204ENST00000382004 FAM90A20PA6NIJ5 464 aa4.96□□□□□ -1.62
RFX3-204ENST00000382004 FAM90A8PA6NJQ4 464 aa4.96□□□□□ -1.62
RFX3-204ENST00000382004 FAM90A7PA6NKC0 464 aa4.96□□□□□ -1.62
RFX3-204ENST00000382004 FAM90A22PA8MWA6 464 aa4.96□□□□□ -1.62
RFX3-204ENST00000382004 FAM90A12PA8MX19 464 aa4.96□□□□□ -1.62
RFX3-204ENST00000382004 FAM90A5PA8MXJ8 464 aa4.96□□□□□ -1.62
RFX3-204ENST00000382004 FAM90A23PA8MXZ1 464 aa4.96□□□□□ -1.62
RFX3-204ENST00000382004 FOXS1O43638 330 aa4.96□□□□□ -1.62
RFX3-204ENST00000382004 FAM90A15PP0C7V4 464 aa4.96□□□□□ -1.62
RFX3-204ENST00000382004 FAM90A13PP0C7W8 464 aa4.96□□□□□ -1.62
RFX3-204ENST00000382004 FAM90A14PP0C7W9 464 aa4.96□□□□□ -1.62
RFX3-204ENST00000382004 FAM90A24PP0C7X0 464 aa4.96□□□□□ -1.62
RFX3-204ENST00000382004 APOBEC3AP31941 199 aaPredicted RBP4.96□□□□□ -1.62
RFX3-204ENST00000382004 FAM201AQ5SY85 155 aa4.96□□□□□ -1.62
RFX3-204ENST00000382004 ATP1A1-AS1Q5TC04 95 aa4.96□□□□□ -1.62
RFX3-204ENST00000382004 EPDR1Q9UM22 224 aa4.96□□□□□ -1.62
RFX3-204ENST00000382004 LHFPL6Q9Y693 200 aa4.96□□□□□ -1.62
RFX3-204ENST00000382004 TOGARAM1Q9Y4F4 1720 aa4.95□□□□□ -1.62
RFX3-204ENST00000382004 TRAV5A0A0B4J249 113 aa4.95□□□□□ -1.62
RFX3-204ENST00000382004 EFEMP2O95967 443 aa4.95□□□□□ -1.62
RFX3-204ENST00000382004 H2BFSP57053 126 aa4.95□□□□□ -1.62
RFX3-204ENST00000382004 ZNF479Q96JC4 524 aa4.95□□□□□ -1.62
RFX3-204ENST00000382004 GGTLC1Q9BX51 225 aa4.95□□□□□ -1.62
RFX3-204ENST00000382004 SRXN1Q9BYN0 137 aa4.95□□□□□ -1.62
RFX3-204ENST00000382004 RSPO4Q2I0M5 234 aaPredicted RBP4.95□□□□□ -1.62
RFX3-204ENST00000382004 Q6AWC8 147 aa4.95□□□□□ -1.62
RFX3-204ENST00000382004 A0A1B0GW15 77 aa4.95□□□□□ -1.62
RFX3-204ENST00000382004 C1QAP02745 245 aa4.95□□□□□ -1.62
RFX3-204ENST00000382004 SSBP2P81877 361 aaPredicted RBP4.95□□□□□ -1.62
RFX3-204ENST00000382004 SAXO1Q8IYX7 474 aa4.95□□□□□ -1.62
RFX3-204ENST00000382004 NAA38Q9BRA0 125 aaKnown RBP4.95□□□□□ -1.62
RFX3-204ENST00000382004 PPP1R3EQ9H7J1 279 aa4.95□□□□□ -1.62
RFX3-204ENST00000382004 MYO5AQ9Y4I1 1855 aaKnown RBP4.95□□□□□ -1.62
RFX3-204ENST00000382004 ERVH48-1M5A8F1 160 aa4.95□□□□□ -1.62
RFX3-204ENST00000382004 FOXL1Q12952 345 aa4.95□□□□□ -1.62
RFX3-204ENST00000382004 C1QTNF12Q5T7M4 302 aa4.95□□□□□ -1.62
RFX3-204ENST00000382004 MGST2Q99735 147 aa4.95□□□□□ -1.62
RFX3-204ENST00000382004 PRADC1Q9BSG0 188 aa4.95□□□□□ -1.62
RFX3-204ENST00000382004 HS3ST3B1Q9Y662 390 aa4.95□□□□□ -1.62
RFX3-204ENST00000382004 TDRD15B5MCY1 1934 aaKnown RBP4.95□□□□□ -1.62
RFX3-204ENST00000382004 Q96M66 194 aa4.95□□□□□ -1.62
RFX3-204ENST00000382004 ASCL2Q99929 193 aa4.95□□□□□ -1.62
RFX3-204ENST00000382004 PILRBQ9UKJ0 227 aa4.95□□□□□ -1.62
RFX3-204ENST00000382004 CADP27708 2225 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms