RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 CSRP2Q16527 193 aa14.36□□□□□ -0.11
SGCB-201ENST00000381431 LRTM2Q8N967 370 aa14.36□□□□□ -0.11
SGCB-201ENST00000381431 ZCCHC14Q8WYQ9 949 aaKnown RBP14.36□□□□□ -0.11
SGCB-201ENST00000381431 MUC6Q6W4X9 2439 aa14.36□□□□□ -0.11
SGCB-201ENST00000381431 FBLL1A6NHQ2 334 aaKnown RBP14.35□□□□□ -0.11
SGCB-201ENST00000381431 MFAP4P55083 255 aa14.35□□□□□ -0.11
SGCB-201ENST00000381431 DNM1P46Q6ZS02 220 aa14.35□□□□□ -0.11
SGCB-201ENST00000381431 GTF3AQ92664 365 aaKnown RBP14.35□□□□□ -0.11
SGCB-201ENST00000381431 LILRA1O75019 489 aa14.35□□□□□ -0.11
SGCB-201ENST00000381431 C1QTNF9P0C862 333 aa14.35□□□□□ -0.11
SGCB-201ENST00000381431 FAM106CPP0CH98 169 aa14.35□□□□□ -0.11
SGCB-201ENST00000381431 CA7P43166 264 aa14.35□□□□□ -0.11
SGCB-201ENST00000381431 TMEM78Q5T7P6 136 aa14.35□□□□□ -0.11
SGCB-201ENST00000381431 MALRD1Q5VYJ5 2156 aa14.35□□□□□ -0.11
SGCB-201ENST00000381431 LINC00587B1AMM8 73 aa14.35□□□□□ -0.11
SGCB-201ENST00000381431 E9PQ18 207 aa14.35□□□□□ -0.11
SGCB-201ENST00000381431 IGKV3D-15A0A087WSY6 115 aa14.35□□□□□ -0.11
SGCB-201ENST00000381431 E9PLN8 166 aa14.35□□□□□ -0.11
SGCB-201ENST00000381431 C19orf24Q9BVV8 132 aa14.35□□□□□ -0.11
SGCB-201ENST00000381431 IGHV3-49A0A0A0MS15 119 aa14.34□□□□□ -0.11
SGCB-201ENST00000381431 LIPFP07098 398 aa14.34□□□□□ -0.11
SGCB-201ENST00000381431 OR4B1Q8NGF8 309 aa14.34□□□□□ -0.11
SGCB-201ENST00000381431 SLX1AQ9BQ83 275 aa14.34□□□□□ -0.11
SGCB-201ENST00000381431 AMY1AP04745 511 aa14.34□□□□□ -0.11
SGCB-201ENST00000381431 CD5P06127 495 aa14.34□□□□□ -0.11
SGCB-201ENST00000381431 ZGRF1Q86YA3 2104 aa14.34□□□□□ -0.11
SGCB-201ENST00000381431 TUBA4BQ9H853 241 aa14.34□□□□□ -0.11
SGCB-201ENST00000381431 ARFGEF3Q5TH69 2177 aa14.34□□□□□ -0.11
SGCB-201ENST00000381431 HELZP42694 1942 aaKnown RBP14.34□□□□□ -0.11
SGCB-201ENST00000381431 HOXA5P20719 270 aa14.34□□□□□ -0.11
SGCB-201ENST00000381431 UCNP55089 124 aa14.34□□□□□ -0.11
SGCB-201ENST00000381431 MORN2Q502X0 79 aa14.34□□□□□ -0.11
SGCB-201ENST00000381431 IGHV3OR16-10A0A075B7F0 116 aa14.33□□□□□ -0.11
SGCB-201ENST00000381431 SAA2-SAA4A0A096LPE2 208 aa14.33□□□□□ -0.11
SGCB-201ENST00000381431 SAA2P0DJI9 122 aaPredicted RBP14.33□□□□□ -0.11
SGCB-201ENST00000381431 BTF3P20290 206 aaKnown RBP14.33□□□□□ -0.11
SGCB-201ENST00000381431 GFRA1P56159 465 aa14.33□□□□□ -0.11
SGCB-201ENST00000381431 C16orf92Q96LL3 132 aa14.33□□□□□ -0.11
SGCB-201ENST00000381431 HGFACQ04756 655 aa14.33□□□□□ -0.12
SGCB-201ENST00000381431 C21orf62-AS1Q17RA5 79 aa14.33□□□□□ -0.12
SGCB-201ENST00000381431 MYOZ3Q8TDC0 251 aa14.33□□□□□ -0.12
SGCB-201ENST00000381431 A0A1B0GV90 55 aa14.33□□□□□ -0.12
SGCB-201ENST00000381431 LCN2P80188 198 aa14.33□□□□□ -0.12
SGCB-201ENST00000381431 LOC105371242A0A075B767 164 aa14.32□□□□□ -0.12
SGCB-201ENST00000381431 A0A087WWC5 75 aa14.32□□□□□ -0.12
SGCB-201ENST00000381431 MUC21A0A0G2JKD1 596 aa14.32□□□□□ -0.12
SGCB-201ENST00000381431 MUC21A0A140T8X8 626 aa14.32□□□□□ -0.12
SGCB-201ENST00000381431 SRSF9Q13242 221 aaKnown RBP eCLIP14.32□□□□□ -0.12
SGCB-201ENST00000381431 MUC21Q5SSG8 566 aa14.32□□□□□ -0.12
SGCB-201ENST00000381431 MRPL32Q9BYC8 188 aaKnown RBP14.32□□□□□ -0.12
SGCB-201ENST00000381431 OR4C46A6NHA9 309 aa14.32□□□□□ -0.12
SGCB-201ENST00000381431 IL18BPO95998 194 aa14.32□□□□□ -0.12
SGCB-201ENST00000381431 GPX4P36969 197 aaPredicted RBP14.32□□□□□ -0.12
SGCB-201ENST00000381431 UQCRFS1P47985 274 aa14.32□□□□□ -0.12
SGCB-201ENST00000381431 TCF23Q7RTU1 214 aa14.32□□□□□ -0.12
SGCB-201ENST00000381431 C17orf100A8MU93 164 aa14.32□□□□□ -0.12
SGCB-201ENST00000381431 B9A039 149 aa14.32□□□□□ -0.12
SGCB-201ENST00000381431 RBFOX2O43251 390 aaKnown RBP eCLIP14.32□□□□□ -0.12
SGCB-201ENST00000381431 CD59P13987 128 aa14.32□□□□□ -0.12
SGCB-201ENST00000381431 MBNL2Q5VZF2 373 aaKnown RBP14.32□□□□□ -0.12
SGCB-201ENST00000381431 WNT10AQ9GZT5 417 aa14.32□□□□□ -0.12
SGCB-201ENST00000381431 SEMA5BQ9P283 1151 aa14.32□□□□□ -0.12
SGCB-201ENST00000381431 SAA1P0DJI8 122 aaPredicted RBP14.31□□□□□ -0.12
SGCB-201ENST00000381431 DUTP33316 252 aaKnown RBP14.31□□□□□ -0.12
SGCB-201ENST00000381431 UQCR10Q9UDW1 63 aa14.31□□□□□ -0.12
SGCB-201ENST00000381431 NLRC5Q86WI3 1866 aa14.31□□□□□ -0.12
SGCB-201ENST00000381431 SH2D7A6NKC9 451 aaPredicted RBP14.31□□□□□ -0.12
SGCB-201ENST00000381431 COLCA2A8K830 154 aa14.31□□□□□ -0.12
SGCB-201ENST00000381431 HIST1H2BKO60814 126 aa14.31□□□□□ -0.12
SGCB-201ENST00000381431 IGHV3-23P01764 117 aa14.31□□□□□ -0.12
SGCB-201ENST00000381431 HIST1H2BJP06899 126 aa14.31□□□□□ -0.12
SGCB-201ENST00000381431 OR9G9P0C7N8 305 aa14.31□□□□□ -0.12
SGCB-201ENST00000381431 HIST1H2BOP23527 126 aa14.31□□□□□ -0.12
SGCB-201ENST00000381431 HIST1H2BBP33778 126 aa14.31□□□□□ -0.12
SGCB-201ENST00000381431 HIST1H2BDP58876 126 aa14.31□□□□□ -0.12
SGCB-201ENST00000381431 HIST1H2BCP62807 126 aa14.31□□□□□ -0.12
SGCB-201ENST00000381431 HIST2H2BEQ16778 126 aa14.31□□□□□ -0.12
SGCB-201ENST00000381431 TMEM30BQ3MIR4 351 aa14.31□□□□□ -0.12
SGCB-201ENST00000381431 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.31□□□□□ -0.12
SGCB-201ENST00000381431 HIST1H2BHQ93079 126 aa14.31□□□□□ -0.12
SGCB-201ENST00000381431 HIST1H2BNQ99877 126 aa14.31□□□□□ -0.12
SGCB-201ENST00000381431 HIST1H2BMQ99879 126 aa14.31□□□□□ -0.12
SGCB-201ENST00000381431 APOBEC3AP31941 199 aaPredicted RBP14.31□□□□□ -0.12
SGCB-201ENST00000381431 C2orf83Q53S99 150 aa14.31□□□□□ -0.12
SGCB-201ENST00000381431 RBPMS2Q6ZRY4 209 aaKnown RBP14.31□□□□□ -0.12
SGCB-201ENST00000381431 CSPG4Q6UVK1 2322 aa14.31□□□□□ -0.12
SGCB-201ENST00000381431 PLXND1Q9Y4D7 1925 aa14.31□□□□□ -0.12
SGCB-201ENST00000381431 LYNX1G3V0Z9 82 aa14.31□□□□□ -0.12
SGCB-201ENST00000381431 YPEL1O60688 119 aa14.31□□□□□ -0.12
SGCB-201ENST00000381431 SS18L1O75177 396 aaPredicted RBP14.31□□□□□ -0.12
SGCB-201ENST00000381431 LYNX1P0DP58 116 aa14.31□□□□□ -0.12
SGCB-201ENST00000381431 ATP5IP56385 69 aaPredicted RBP14.31□□□□□ -0.12
SGCB-201ENST00000381431 PMCHL1Q16048 86 aa14.31□□□□□ -0.12
SGCB-201ENST00000381431 FAM19A2Q8N3H0 131 aa14.31□□□□□ -0.12
SGCB-201ENST00000381431 YPEL2Q96QA6 119 aa14.31□□□□□ -0.12
SGCB-201ENST00000381431 IL36BQ9NZH7 164 aa14.31□□□□□ -0.12
SGCB-201ENST00000381431 COMPP49747 757 aaPredicted RBP14.3□□□□□ -0.12
SGCB-201ENST00000381431 LINC00205P59089 165 aa14.3□□□□□ -0.12
SGCB-201ENST00000381431 LY6EQ16553 131 aa14.3□□□□□ -0.12
SGCB-201ENST00000381431 KCNS1Q96KK3 526 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms