RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 OR13C7P0DN81 318 aa15.93■□□□□ 0.14
PDLIM5-205ENST00000380180 PAX6P26367 422 aa15.93■□□□□ 0.14
PDLIM5-205ENST00000380180 ACOT6Q3I5F7 207 aaPredicted RBP15.93■□□□□ 0.14
PDLIM5-205ENST00000380180 FAM122CQ6P4D5 195 aa15.93■□□□□ 0.14
PDLIM5-205ENST00000380180 SUN5Q8TC36 379 aa15.93■□□□□ 0.14
PDLIM5-205ENST00000380180 ACTR3CQ9C0K3 210 aaPredicted RBP15.93■□□□□ 0.14
PDLIM5-205ENST00000380180 METTL1Q9UBP6 276 aaKnown RBP15.93■□□□□ 0.14
PDLIM5-205ENST00000380180 VENTXO95231 258 aa15.92■□□□□ 0.14
PDLIM5-205ENST00000380180 DEFA4P12838 97 aa15.92■□□□□ 0.14
PDLIM5-205ENST00000380180 HOXB4P17483 251 aaPredicted RBP15.92■□□□□ 0.14
PDLIM5-205ENST00000380180 MLANAQ16655 118 aa15.92■□□□□ 0.14
PDLIM5-205ENST00000380180 GCSAMLQ5JQS6 135 aa15.92■□□□□ 0.14
PDLIM5-205ENST00000380180 MIC13Q5XKP0 118 aa15.92■□□□□ 0.14
PDLIM5-205ENST00000380180 RXFP4Q8TDU9 374 aa15.92■□□□□ 0.14
PDLIM5-205ENST00000380180 RNF5Q99942 180 aa15.92■□□□□ 0.14
PDLIM5-205ENST00000380180 ZFP92A6NM28 416 aa15.92■□□□□ 0.14
PDLIM5-205ENST00000380180 CYB5BO43169 146 aa15.92■□□□□ 0.14
PDLIM5-205ENST00000380180 NPBWR1P48145 328 aa15.92■□□□□ 0.14
PDLIM5-205ENST00000380180 TNXAQ16473 311 aa15.92■□□□□ 0.14
PDLIM5-205ENST00000380180 PPP1R27Q86WC6 154 aa15.92■□□□□ 0.14
PDLIM5-205ENST00000380180 CFHR4Q92496 578 aa15.92■□□□□ 0.14
PDLIM5-205ENST00000380180 RAB24Q969Q5 203 aa15.92■□□□□ 0.14
PDLIM5-205ENST00000380180 FBXL15Q9H469 300 aa15.92■□□□□ 0.14
PDLIM5-205ENST00000380180 PXMP4Q9Y6I8 212 aa15.92■□□□□ 0.14
PDLIM5-205ENST00000380180 NUPL2O15504 423 aaKnown RBP15.91■□□□□ 0.14
PDLIM5-205ENST00000380180 SOX15O60248 233 aa15.91■□□□□ 0.14
PDLIM5-205ENST00000380180 ACTL6BO94805 426 aa15.91■□□□□ 0.14
PDLIM5-205ENST00000380180 YIF1AO95070 293 aa15.91■□□□□ 0.14
PDLIM5-205ENST00000380180 SRP19P09132 144 aaKnown RBP15.91■□□□□ 0.14
PDLIM5-205ENST00000380180 SRSF1Q07955 248 aaKnown RBP eCLIP15.91■□□□□ 0.14
PDLIM5-205ENST00000380180 KHDC3LQ587J8 217 aa15.91■□□□□ 0.14
PDLIM5-205ENST00000380180 SSMEM1Q8WWF3 244 aa15.91■□□□□ 0.14
PDLIM5-205ENST00000380180 LOC102723971A0A1B0GUV8 181 aa15.9■□□□□ 0.14
PDLIM5-205ENST00000380180 FBP1P09467 338 aa15.9■□□□□ 0.14
PDLIM5-205ENST00000380180 GAMTQ14353 236 aa15.9■□□□□ 0.14
PDLIM5-205ENST00000380180 SSX2Q16385 188 aa15.9■□□□□ 0.14
PDLIM5-205ENST00000380180 FAM168AQ92567 244 aa15.9■□□□□ 0.14
PDLIM5-205ENST00000380180 ABCA2Q9BZC7 2435 aa15.9■□□□□ 0.14
PDLIM5-205ENST00000380180 DNASE2O00115 360 aaPredicted RBP15.9■□□□□ 0.14
PDLIM5-205ENST00000380180 TOX4O94842 621 aa15.9■□□□□ 0.14
PDLIM5-205ENST00000380180 HSPB1P04792 205 aaKnown RBP15.9■□□□□ 0.14
PDLIM5-205ENST00000380180 MAS1LP35410 378 aa15.9■□□□□ 0.14
PDLIM5-205ENST00000380180 RPL27AP46776 148 aaKnown RBP15.9■□□□□ 0.14
PDLIM5-205ENST00000380180 CD69Q07108 199 aa15.9■□□□□ 0.14
PDLIM5-205ENST00000380180 RAB31Q13636 194 aa15.9■□□□□ 0.14
PDLIM5-205ENST00000380180 HABP2Q14520 560 aaPredicted RBP15.9■□□□□ 0.14
PDLIM5-205ENST00000380180 TMEM144Q7Z5S9 345 aa15.9■□□□□ 0.14
PDLIM5-205ENST00000380180 CLRN3Q8NCR9 226 aa15.9■□□□□ 0.14
PDLIM5-205ENST00000380180 P2RX4Q99571 388 aa15.9■□□□□ 0.14
PDLIM5-205ENST00000380180 TMPRSS5Q9H3S3 457 aa15.9■□□□□ 0.14
PDLIM5-205ENST00000380180 CRYBG3Q68DQ2 2970 aa15.89■□□□□ 0.13
PDLIM5-205ENST00000380180 FAM74A7A6NL05 159 aa15.89■□□□□ 0.13
PDLIM5-205ENST00000380180 REG1AP05451 166 aa15.89■□□□□ 0.13
PDLIM5-205ENST00000380180 BCL2P10415 239 aa15.89■□□□□ 0.13
PDLIM5-205ENST00000380180 CD24P25063 80 aa15.89■□□□□ 0.13
PDLIM5-205ENST00000380180 CDC34P49427 236 aaPredicted RBP15.89■□□□□ 0.13
PDLIM5-205ENST00000380180 COMPP49747 757 aaPredicted RBP15.89■□□□□ 0.13
PDLIM5-205ENST00000380180 SUB1P53999 127 aaKnown RBP eCLIP15.89■□□□□ 0.13
PDLIM5-205ENST00000380180 FAM74A3Q4VXF1 159 aa15.89■□□□□ 0.13
PDLIM5-205ENST00000380180 FAM208BQ5VWN6 2430 aa15.89■□□□□ 0.13
PDLIM5-205ENST00000380180 IGLC7A0M8Q6 106 aa15.89■□□□□ 0.13
PDLIM5-205ENST00000380180 SEC14L6B5MCN3 397 aa15.89■□□□□ 0.13
PDLIM5-205ENST00000380180 FOXH1O75593 365 aa15.89■□□□□ 0.13
PDLIM5-205ENST00000380180 GNB1P62873 340 aa15.89■□□□□ 0.13
PDLIM5-205ENST00000380180 SOHLH1Q5JUK2 328 aa15.89■□□□□ 0.13
PDLIM5-205ENST00000380180 DYNAPQ8N1N2 210 aa15.89■□□□□ 0.13
PDLIM5-205ENST00000380180 UBR5O95071 2799 aaPredicted RBP15.88■□□□□ 0.13
PDLIM5-205ENST00000380180 IGKV1OR2-108A0A075B7D4 117 aa15.88■□□□□ 0.13
PDLIM5-205ENST00000380180 FCN1O00602 326 aa15.88■□□□□ 0.13
PDLIM5-205ENST00000380180 ATP5J2P56134 94 aa15.88■□□□□ 0.13
PDLIM5-205ENST00000380180 LGALS4P56470 323 aa15.88■□□□□ 0.13
PDLIM5-205ENST00000380180 B2MP61769 119 aa15.88■□□□□ 0.13
PDLIM5-205ENST00000380180 C17orf50Q8WW18 174 aa15.88■□□□□ 0.13
PDLIM5-205ENST00000380180 CACNG8Q8WXS5 425 aa15.88■□□□□ 0.13
PDLIM5-205ENST00000380180 TBX15Q96SF7 602 aa15.88■□□□□ 0.13
PDLIM5-205ENST00000380180 PIMREGQ9BSJ6 248 aa15.88■□□□□ 0.13
PDLIM5-205ENST00000380180 KCNIP2Q9NS61 270 aa15.88■□□□□ 0.13
PDLIM5-205ENST00000380180 GPX4P36969 197 aaPredicted RBP15.87■□□□□ 0.13
PDLIM5-205ENST00000380180 RPL29P47914 159 aaKnown RBP15.87■□□□□ 0.13
PDLIM5-205ENST00000380180 PMS2P11Q13670 270 aa15.87■□□□□ 0.13
PDLIM5-205ENST00000380180 PLGLAQ15195 96 aa15.87■□□□□ 0.13
PDLIM5-205ENST00000380180 MMDQ15546 238 aa15.87■□□□□ 0.13
PDLIM5-205ENST00000380180 MINOS1Q5TGZ0 78 aa15.87■□□□□ 0.13
PDLIM5-205ENST00000380180 STPG3Q8N7X2 389 aa15.87■□□□□ 0.13
PDLIM5-205ENST00000380180 C10orf105Q8TEF2 133 aa15.87■□□□□ 0.13
PDLIM5-205ENST00000380180 LPAR2Q9HBW0 351 aa15.87■□□□□ 0.13
PDLIM5-205ENST00000380180 MINOS1-NBL1R4GNA1 71 aa15.87■□□□□ 0.13
PDLIM5-205ENST00000380180 MOSP00540 346 aa15.87■□□□□ 0.13
PDLIM5-205ENST00000380180 APELAP0DMC3 54 aa15.87■□□□□ 0.13
PDLIM5-205ENST00000380180 CEBPGP53567 150 aa15.87■□□□□ 0.13
PDLIM5-205ENST00000380180 CYB561D1Q8N8Q1 229 aa15.87■□□□□ 0.13
PDLIM5-205ENST00000380180 OR2T6Q8NHC8 308 aa15.87■□□□□ 0.13
PDLIM5-205ENST00000380180 RNASEH2CQ8TDP1 164 aaKnown RBP15.87■□□□□ 0.13
PDLIM5-205ENST00000380180 EAF1Q96JC9 268 aaPredicted RBP15.87■□□□□ 0.13
PDLIM5-205ENST00000380180 A0A1W2PPV4 95 aa15.86■□□□□ 0.13
PDLIM5-205ENST00000380180 IFNA1P01562 189 aa15.86■□□□□ 0.13
PDLIM5-205ENST00000380180 AREGP15514 252 aa15.86■□□□□ 0.13
PDLIM5-205ENST00000380180 SSBP2P81877 361 aaPredicted RBP15.86■□□□□ 0.13
PDLIM5-205ENST00000380180 CCDC144NLQ6NUI1 221 aa15.86■□□□□ 0.13
PDLIM5-205ENST00000380180 TMEM88Q6PEY1 159 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms