RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 TNXAQ16473 311 aa10.39□□□□□ -0.75
TRIM40-206ENST00000376724 FFAR4Q5NUL3 377 aa10.39□□□□□ -0.75
TRIM40-206ENST00000376724 LCN15Q6UWW0 184 aa10.39□□□□□ -0.75
TRIM40-206ENST00000376724 TREML4Q6UXN2 200 aa10.39□□□□□ -0.75
TRIM40-206ENST00000376724 COMMD1Q8N668 190 aa10.39□□□□□ -0.75
TRIM40-206ENST00000376724 KIR3DL3Q8N743 410 aa10.39□□□□□ -0.75
TRIM40-206ENST00000376724 METTL1Q9UBP6 276 aaKnown RBP10.39□□□□□ -0.75
TRIM40-206ENST00000376724 WDR83OSQ9Y284 106 aa10.39□□□□□ -0.75
TRIM40-206ENST00000376724 MED13LQ71F56 2210 aa10.39□□□□□ -0.75
TRIM40-206ENST00000376724 CGB1A6NKQ9 187 aa10.38□□□□□ -0.75
TRIM40-206ENST00000376724 C17orf112F2Z3M2 114 aa10.38□□□□□ -0.75
TRIM40-206ENST00000376724 IGKV1D-33P01593 117 aa10.38□□□□□ -0.75
TRIM40-206ENST00000376724 IGKV1-33P01594 117 aa10.38□□□□□ -0.75
TRIM40-206ENST00000376724 SFTA3P0C7M3 94 aa10.38□□□□□ -0.75
TRIM40-206ENST00000376724 MDKP21741 143 aaPredicted RBP10.38□□□□□ -0.75
TRIM40-206ENST00000376724 FGF8P55075 233 aaPredicted RBP10.38□□□□□ -0.75
TRIM40-206ENST00000376724 LGALS4P56470 323 aa10.38□□□□□ -0.75
TRIM40-206ENST00000376724 DLK1P80370 383 aa10.38□□□□□ -0.75
TRIM40-206ENST00000376724 ERHP84090 104 aaKnown RBP10.38□□□□□ -0.75
TRIM40-206ENST00000376724 MRGPRG-AS1Q2M3A8 158 aa10.38□□□□□ -0.75
TRIM40-206ENST00000376724 RNF212Q495C1 297 aa10.38□□□□□ -0.75
TRIM40-206ENST00000376724 ARSJQ5FYB0 599 aaPredicted RBP10.38□□□□□ -0.75
TRIM40-206ENST00000376724 SSX7Q7RTT5 188 aa10.38□□□□□ -0.75
TRIM40-206ENST00000376724 TEX45Q8NA69 505 aa10.38□□□□□ -0.75
TRIM40-206ENST00000376724 RARRES2Q99969 163 aa10.38□□□□□ -0.75
TRIM40-206ENST00000376724 GGACTQ9BVM4 153 aa10.38□□□□□ -0.75
TRIM40-206ENST00000376724 SEC11CQ9BY50 192 aa10.38□□□□□ -0.75
TRIM40-206ENST00000376724 SIRPDQ9H106 197 aa10.38□□□□□ -0.75
TRIM40-206ENST00000376724 FAM157AC9JC47 383 aa10.38□□□□□ -0.75
TRIM40-206ENST00000376724 HMGB3O15347 200 aaKnown RBP10.38□□□□□ -0.75
TRIM40-206ENST00000376724 ACTL6BO94805 426 aa10.38□□□□□ -0.75
TRIM40-206ENST00000376724 APELAP0DMC3 54 aa10.38□□□□□ -0.75
TRIM40-206ENST00000376724 PPT1P50897 306 aa10.38□□□□□ -0.75
TRIM40-206ENST00000376724 PLGLAQ15195 96 aa10.38□□□□□ -0.75
TRIM40-206ENST00000376724 HAGHQ16775 308 aa10.38□□□□□ -0.75
TRIM40-206ENST00000376724 CLEC2AQ6UVW9 174 aa10.38□□□□□ -0.75
TRIM40-206ENST00000376724 CENPVQ7Z7K6 275 aaPredicted RBP10.38□□□□□ -0.75
TRIM40-206ENST00000376724 LFNGQ8NES3 379 aa10.38□□□□□ -0.75
TRIM40-206ENST00000376724 RCC1LQ96I51 464 aaKnown RBP10.38□□□□□ -0.75
TRIM40-206ENST00000376724 PBDC1Q9BVG4 233 aa10.38□□□□□ -0.75
TRIM40-206ENST00000376724 FBXL15Q9H469 300 aa10.38□□□□□ -0.75
TRIM40-206ENST00000376724 SIGLEC9Q9Y336 463 aa10.38□□□□□ -0.75
TRIM40-206ENST00000376724 IGHV4-61A0A0C4DH41 118 aa10.37□□□□□ -0.75
TRIM40-206ENST00000376724 A0A1B0GW64 132 aa10.37□□□□□ -0.75
TRIM40-206ENST00000376724 A0A1W2PN81 502 aa10.37□□□□□ -0.75
TRIM40-206ENST00000376724 COLCA2A8K830 154 aa10.37□□□□□ -0.75
TRIM40-206ENST00000376724 FOXH1O75593 365 aa10.37□□□□□ -0.75
TRIM40-206ENST00000376724 VENTXO95231 258 aa10.37□□□□□ -0.75
TRIM40-206ENST00000376724 REG1AP05451 166 aa10.37□□□□□ -0.75
TRIM40-206ENST00000376724 FBP1P09467 338 aa10.37□□□□□ -0.75
TRIM40-206ENST00000376724 OR13C7P0DN81 318 aa10.37□□□□□ -0.75
TRIM40-206ENST00000376724 RNASE2P10153 161 aaKnown RBP10.37□□□□□ -0.75
TRIM40-206ENST00000376724 CHRNA7P36544 502 aa10.37□□□□□ -0.75
TRIM40-206ENST00000376724 WT1-ASQ06250 92 aa10.37□□□□□ -0.75
TRIM40-206ENST00000376724 HES1Q14469 280 aa10.37□□□□□ -0.75
TRIM40-206ENST00000376724 PEA15Q15121 130 aa10.37□□□□□ -0.75
TRIM40-206ENST00000376724 PRSS8Q16651 343 aa10.37□□□□□ -0.75
TRIM40-206ENST00000376724 MMD2Q8IY49 270 aa10.37□□□□□ -0.75
TRIM40-206ENST00000376724 RPP25LQ8N5L8 163 aaKnown RBP10.37□□□□□ -0.75
TRIM40-206ENST00000376724 OR10G4Q8NGN3 311 aa10.37□□□□□ -0.75
TRIM40-206ENST00000376724 OR10G9Q8NGN4 311 aa10.37□□□□□ -0.75
TRIM40-206ENST00000376724 OR10G7Q8NGN6 311 aa10.37□□□□□ -0.75
TRIM40-206ENST00000376724 UNKLQ9H9P5 680 aaKnown RBP10.37□□□□□ -0.75
TRIM40-206ENST00000376724 NPVFQ9HCQ7 196 aa10.37□□□□□ -0.75
TRIM40-206ENST00000376724 WNK2Q9Y3S1 2297 aa10.36□□□□□ -0.75
TRIM40-206ENST00000376724 C1orf196B1AJZ1 125 aa10.36□□□□□ -0.75
TRIM40-206ENST00000376724 HBE1P02100 147 aa10.36□□□□□ -0.75
TRIM40-206ENST00000376724 CRYGBP07316 175 aa10.36□□□□□ -0.75
TRIM40-206ENST00000376724 DEFA4P12838 97 aa10.36□□□□□ -0.75
TRIM40-206ENST00000376724 MMDQ15546 238 aa10.36□□□□□ -0.75
TRIM40-206ENST00000376724 MLANAQ16655 118 aa10.36□□□□□ -0.75
TRIM40-206ENST00000376724 C2orf83Q53S99 150 aa10.36□□□□□ -0.75
TRIM40-206ENST00000376724 ZNF787Q6DD87 383 aa10.36□□□□□ -0.75
TRIM40-206ENST00000376724 PPP1R27Q86WC6 154 aa10.36□□□□□ -0.75
TRIM40-206ENST00000376724 DYNAPQ8N1N2 210 aa10.36□□□□□ -0.75
TRIM40-206ENST00000376724 C10orf105Q8TEF2 133 aa10.36□□□□□ -0.75
TRIM40-206ENST00000376724 MGST2Q99735 147 aa10.36□□□□□ -0.75
TRIM40-206ENST00000376724 SCRT1Q9BWW7 348 aa10.36□□□□□ -0.75
TRIM40-206ENST00000376724 SLC25A22Q9H936 323 aa10.36□□□□□ -0.75
TRIM40-206ENST00000376724 BTBD17A6NE02 478 aa10.36□□□□□ -0.75
TRIM40-206ENST00000376724 COL8A1P27658 744 aa10.36□□□□□ -0.75
TRIM40-206ENST00000376724 SSMEM1Q8WWF3 244 aa10.36□□□□□ -0.75
TRIM40-206ENST00000376724 CFHR4Q92496 578 aa10.36□□□□□ -0.75
TRIM40-206ENST00000376724 TBX15Q96SF7 602 aa10.36□□□□□ -0.75
TRIM40-206ENST00000376724 SLC39A9Q9NUM3 307 aa10.36□□□□□ -0.75
TRIM40-206ENST00000376724 VPS13CQ709C8 3753 aa10.36□□□□□ -0.75
TRIM40-206ENST00000376724 IGHV4-30-2A0A087WSY4 118 aa10.35□□□□□ -0.75
TRIM40-206ENST00000376724 MAP1LC3B2A6NCE7 125 aa10.35□□□□□ -0.75
TRIM40-206ENST00000376724 RBFOX3A6NFN3 312 aa10.35□□□□□ -0.75
TRIM40-206ENST00000376724 FCN1O00602 326 aa10.35□□□□□ -0.75
TRIM40-206ENST00000376724 MPDU1O75352 247 aa10.35□□□□□ -0.75
TRIM40-206ENST00000376724 MBP02144 154 aa10.35□□□□□ -0.75
TRIM40-206ENST00000376724 RPL27AP46776 148 aaKnown RBP10.35□□□□□ -0.75
TRIM40-206ENST00000376724 BSXQ3C1V8 233 aa10.35□□□□□ -0.75
TRIM40-206ENST00000376724 GCSAMLQ5JQS6 135 aa10.35□□□□□ -0.75
TRIM40-206ENST00000376724 MIC13Q5XKP0 118 aa10.35□□□□□ -0.75
TRIM40-206ENST00000376724 TEPPQ6URK8 271 aa10.35□□□□□ -0.75
TRIM40-206ENST00000376724 C1orf159Q96HA4 380 aa10.35□□□□□ -0.75
TRIM40-206ENST00000376724 MAP1LC3BQ9GZQ8 125 aa10.35□□□□□ -0.75
TRIM40-206ENST00000376724 KIAA1456Q9P272 454 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms