RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 SAMD12Q8N8I0 201 aa11□□□□□ -0.65
HDAC6-204ENST00000376643 UBAC2Q8NBM4 344 aa11□□□□□ -0.65
HDAC6-204ENST00000376643 SCARB1Q8WTV0 552 aa11□□□□□ -0.65
HDAC6-204ENST00000376643 FCAMRQ8WWV6 532 aa11□□□□□ -0.65
HDAC6-204ENST00000376643 GALNT14Q96FL9 552 aa11□□□□□ -0.65
HDAC6-204ENST00000376643 TXN2Q99757 166 aa11□□□□□ -0.65
HDAC6-204ENST00000376643 C20orf24Q9BUV8 137 aa11□□□□□ -0.65
HDAC6-204ENST00000376643 KLK5Q9Y337 293 aaPredicted RBP11□□□□□ -0.65
HDAC6-204ENST00000376643 SACSQ9NZJ4 4579 aa11□□□□□ -0.65
HDAC6-204ENST00000376643 CSMD3Q7Z407 3707 aa10.99□□□□□ -0.65
HDAC6-204ENST00000376643 MEIS3P1A6NDR6 274 aa10.99□□□□□ -0.65
HDAC6-204ENST00000376643 PMP2P02689 132 aa10.99□□□□□ -0.65
HDAC6-204ENST00000376643 RFX2P48378 723 aa10.99□□□□□ -0.65
HDAC6-204ENST00000376643 SCPEP1Q9HB40 452 aa10.99□□□□□ -0.65
HDAC6-204ENST00000376643 LYSTQ99698 3801 aa10.98□□□□□ -0.65
HDAC6-204ENST00000376643 C15orf61A6NNL5 157 aa10.98□□□□□ -0.65
HDAC6-204ENST00000376643 SCGB2A1O75556 95 aa10.98□□□□□ -0.65
HDAC6-204ENST00000376643 EIF4EP06730 217 aaKnown RBP10.98□□□□□ -0.65
HDAC6-204ENST00000376643 RPA2P15927 270 aa10.98□□□□□ -0.65
HDAC6-204ENST00000376643 FCGR2BP31994 310 aaPredicted RBP10.98□□□□□ -0.65
HDAC6-204ENST00000376643 G6PCP35575 357 aa10.98□□□□□ -0.65
HDAC6-204ENST00000376643 MFAP4P55083 255 aa10.98□□□□□ -0.65
HDAC6-204ENST00000376643 PAFAH1B2P68402 229 aa10.98□□□□□ -0.65
HDAC6-204ENST00000376643 H2BFWTQ7Z2G1 175 aa10.98□□□□□ -0.65
HDAC6-204ENST00000376643 OR4A16Q8NH70 328 aa10.98□□□□□ -0.65
HDAC6-204ENST00000376643 GINS3Q9BRX5 216 aa10.98□□□□□ -0.65
HDAC6-204ENST00000376643 TMEM14BQ9NUH8 114 aa10.98□□□□□ -0.65
HDAC6-204ENST00000376643 K7EIM0 57 aa10.97□□□□□ -0.65
HDAC6-204ENST00000376643 ATG12O94817 140 aa10.97□□□□□ -0.65
HDAC6-204ENST00000376643 RCVRNP35243 200 aa10.97□□□□□ -0.65
HDAC6-204ENST00000376643 HRH1P35367 487 aa10.97□□□□□ -0.65
HDAC6-204ENST00000376643 ERHP84090 104 aaKnown RBP10.97□□□□□ -0.65
HDAC6-204ENST00000376643 LYG2Q86SG7 212 aa10.97□□□□□ -0.65
HDAC6-204ENST00000376643 ZNF114Q8NC26 417 aa10.97□□□□□ -0.65
HDAC6-204ENST00000376643 LINC00476Q8WZB0 136 aa10.97□□□□□ -0.65
HDAC6-204ENST00000376643 SELENOKQ9Y6D0 94 aa10.97□□□□□ -0.65
HDAC6-204ENST00000376643 A0A087WXM4 84 aa10.96□□□□□ -0.65
HDAC6-204ENST00000376643 A0A0J9YWU9 116 aa10.96□□□□□ -0.65
HDAC6-204ENST00000376643 YIF1AO95070 293 aa10.96□□□□□ -0.65
HDAC6-204ENST00000376643 APOA1P02647 267 aa10.96□□□□□ -0.65
HDAC6-204ENST00000376643 UCP3P55916 312 aa10.96□□□□□ -0.65
HDAC6-204ENST00000376643 DEFB135Q30KP9 77 aa10.96□□□□□ -0.65
HDAC6-204ENST00000376643 TMEM116Q8NCL8 245 aa10.96□□□□□ -0.65
HDAC6-204ENST00000376643 RNF183Q96D59 192 aa10.96□□□□□ -0.65
HDAC6-204ENST00000376643 FXYD6Q9H0Q3 95 aa10.96□□□□□ -0.65
HDAC6-204ENST00000376643 UBQLN2Q9UHD9 624 aa10.96□□□□□ -0.65
HDAC6-204ENST00000376643 SMPXQ9UHP9 88 aa10.96□□□□□ -0.65
HDAC6-204ENST00000376643 NSG2Q9Y328 171 aa10.96□□□□□ -0.65
HDAC6-204ENST00000376643 IGHV7-4-1A0A0J9YVY3 117 aa10.95□□□□□ -0.66
HDAC6-204ENST00000376643 CORTO00230 105 aa10.95□□□□□ -0.66
HDAC6-204ENST00000376643 GNG7O60262 68 aa10.95□□□□□ -0.66
HDAC6-204ENST00000376643 TNFAIP8O95379 198 aa10.95□□□□□ -0.66
HDAC6-204ENST00000376643 CTSDP07339 412 aaPredicted RBP10.95□□□□□ -0.66
HDAC6-204ENST00000376643 HLA-DMAP28067 261 aa10.95□□□□□ -0.66
HDAC6-204ENST00000376643 RPS19P39019 145 aaKnown RBP10.95□□□□□ -0.66
HDAC6-204ENST00000376643 NPBWR1P48145 328 aa10.95□□□□□ -0.66
HDAC6-204ENST00000376643 PRCDQ00LT1 54 aa10.95□□□□□ -0.66
HDAC6-204ENST00000376643 PMS2P11Q13670 270 aa10.95□□□□□ -0.66
HDAC6-204ENST00000376643 ODF3L2Q3SX64 289 aa10.95□□□□□ -0.66
HDAC6-204ENST00000376643 PHLDA2Q53GA4 152 aa10.95□□□□□ -0.66
HDAC6-204ENST00000376643 CEMP1Q6PRD7 247 aaPredicted RBP10.95□□□□□ -0.66
HDAC6-204ENST00000376643 TBC1D26Q86UD7 250 aa10.95□□□□□ -0.66
HDAC6-204ENST00000376643 GPX8Q8TED1 209 aa10.95□□□□□ -0.66
HDAC6-204ENST00000376643 GATAD1Q8WUU5 269 aa10.95□□□□□ -0.66
HDAC6-204ENST00000376643 SLC25A46Q96AG3 418 aa10.95□□□□□ -0.66
HDAC6-204ENST00000376643 MISP3Q96FF7 219 aa10.95□□□□□ -0.66
HDAC6-204ENST00000376643 ZNF486Q96H40 463 aaPredicted RBP10.95□□□□□ -0.66
HDAC6-204ENST00000376643 OR10C1Q96KK4 312 aa10.95□□□□□ -0.66
HDAC6-204ENST00000376643 CHRDL1Q9BU40 450 aa10.95□□□□□ -0.66
HDAC6-204ENST00000376643 TMEM231Q9H6L2 316 aa10.95□□□□□ -0.66
HDAC6-204ENST00000376643 DNAH1Q9P2D7 4330 aa10.94□□□□□ -0.66
HDAC6-204ENST00000376643 TRAV14DV4A0A0A6YYC5 116 aa10.94□□□□□ -0.66
HDAC6-204ENST00000376643 LY6G6CO95867 125 aa10.94□□□□□ -0.66
HDAC6-204ENST00000376643 CTSGP08311 255 aa10.94□□□□□ -0.66
HDAC6-204ENST00000376643 ADMP35318 185 aa10.94□□□□□ -0.66
HDAC6-204ENST00000376643 SUB1P53999 127 aaKnown RBP eCLIP10.94□□□□□ -0.66
HDAC6-204ENST00000376643 MFAP2P55001 183 aa10.94□□□□□ -0.66
HDAC6-204ENST00000376643 YIPF6Q96EC8 236 aa10.94□□□□□ -0.66
HDAC6-204ENST00000376643 PDCD10Q9BUL8 212 aa10.94□□□□□ -0.66
HDAC6-204ENST00000376643 RHPN1-AS1Q9BWJ2 59 aa10.94□□□□□ -0.66
HDAC6-204ENST00000376643 MFFQ9GZY8 342 aa10.94□□□□□ -0.66
HDAC6-204ENST00000376643 MAP6D1Q9H9H5 199 aa10.94□□□□□ -0.66
HDAC6-204ENST00000376643 IGHV3-21A0A0B4J1V1 117 aa10.93□□□□□ -0.66
HDAC6-204ENST00000376643 MPTX1A8MV57 137 aa10.93□□□□□ -0.66
HDAC6-204ENST00000376643 F8W735 103 aaPredicted RBP10.93□□□□□ -0.66
HDAC6-204ENST00000376643 CHEK1O14757 476 aa10.93□□□□□ -0.66
HDAC6-204ENST00000376643 SNCAP37840 140 aa10.93□□□□□ -0.66
HDAC6-204ENST00000376643 HSPE1P61604 102 aaKnown RBP10.93□□□□□ -0.66
HDAC6-204ENST00000376643 DUSP18Q8NEJ0 188 aa10.93□□□□□ -0.66
HDAC6-204ENST00000376643 C15orf40Q8WUR7 153 aa10.93□□□□□ -0.66
HDAC6-204ENST00000376643 AP3S1Q92572 193 aa10.93□□□□□ -0.66
HDAC6-204ENST00000376643 SEC22AQ96IW7 307 aa10.93□□□□□ -0.66
HDAC6-204ENST00000376643 NXF2Q9GZY0 626 aaKnown RBP10.93□□□□□ -0.66
HDAC6-204ENST00000376643 CSTL1Q9H114 145 aa10.93□□□□□ -0.66
HDAC6-204ENST00000376643 TRAV2A0A0B4J234 112 aa10.92□□□□□ -0.66
HDAC6-204ENST00000376643 I3L2K1 104 aa10.92□□□□□ -0.66
HDAC6-204ENST00000376643 ZNF207O43670 478 aaKnown RBP10.92□□□□□ -0.66
HDAC6-204ENST00000376643 B3GALNT1O75752 331 aa10.92□□□□□ -0.66
HDAC6-204ENST00000376643 DFFBO76075 338 aa10.92□□□□□ -0.66
HDAC6-204ENST00000376643 MT-CO2P00403 227 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms