RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 LTBP1Q14766 1721 aa8.6□□□□□ -1.03
PTCH1-204ENST00000375290 SPINK14Q6IE38 97 aa8.6□□□□□ -1.03
PTCH1-204ENST00000375290 KLF14Q8TD94 323 aaPredicted RBP8.6□□□□□ -1.03
PTCH1-204ENST00000375290 SRSF8Q9BRL6 282 aaKnown RBP8.6□□□□□ -1.03
PTCH1-204ENST00000375290 SNRNP200O75643 2136 aaKnown RBP8.6□□□□□ -1.03
PTCH1-204ENST00000375290 ADMP35318 185 aa8.6□□□□□ -1.03
PTCH1-204ENST00000375290 TM4SF20Q53R12 229 aa8.6□□□□□ -1.03
PTCH1-204ENST00000375290 IGLV3-12A0A075B6K2 115 aa8.6□□□□□ -1.03
PTCH1-204ENST00000375290 TCRBV4S1A1TA0A5B7 111 aa8.6□□□□□ -1.03
PTCH1-204ENST00000375290 TMEM249Q2WGJ8 235 aa8.6□□□□□ -1.03
PTCH1-204ENST00000375290 RBMY1BA6NDE4 496 aaKnown RBP8.6□□□□□ -1.03
PTCH1-204ENST00000375290 RBMY1EA6NEQ0 496 aaKnown RBP8.6□□□□□ -1.03
PTCH1-204ENST00000375290 RBMY1DP0C7P1 496 aaKnown RBP8.6□□□□□ -1.03
PTCH1-204ENST00000375290 RBMY1A1P0DJD3 496 aaKnown RBP8.6□□□□□ -1.03
PTCH1-204ENST00000375290 RBMY1CP0DJD4 496 aa8.6□□□□□ -1.03
PTCH1-204ENST00000375290 PRCDQ00LT1 54 aa8.6□□□□□ -1.03
PTCH1-204ENST00000375290 FAM106AQ4KMX7 169 aa8.6□□□□□ -1.03
PTCH1-204ENST00000375290 ZNF841Q6ZN19 808 aa8.6□□□□□ -1.03
PTCH1-204ENST00000375290 WNT10AQ9GZT5 417 aa8.6□□□□□ -1.03
PTCH1-204ENST00000375290 NPPCP23582 126 aa8.6□□□□□ -1.03
PTCH1-204ENST00000375290 FER1L6-AS1Q8NA97 138 aa8.6□□□□□ -1.03
PTCH1-204ENST00000375290 UBTD1Q9HAC8 227 aa8.6□□□□□ -1.03
PTCH1-204ENST00000375290 TDGF1P3P51864 188 aa8.59□□□□□ -1.03
PTCH1-204ENST00000375290 FAM159AQ6UWV7 190 aa8.59□□□□□ -1.03
PTCH1-204ENST00000375290 HOXA3O43365 443 aaPredicted RBP8.59□□□□□ -1.03
PTCH1-204ENST00000375290 ZNF479Q96JC4 524 aa8.59□□□□□ -1.03
PTCH1-204ENST00000375290 SLX1AQ9BQ83 275 aa8.59□□□□□ -1.03
PTCH1-204ENST00000375290 F8W1H4 67 aa8.59□□□□□ -1.03
PTCH1-204ENST00000375290 UBE2L6O14933 153 aa8.59□□□□□ -1.03
PTCH1-204ENST00000375290 PDE6HQ13956 83 aa8.59□□□□□ -1.03
PTCH1-204ENST00000375290 FOXA2Q9Y261 457 aaPredicted RBP8.59□□□□□ -1.03
PTCH1-204ENST00000375290 DMRTC1Q5HYR2 192 aa8.59□□□□□ -1.03
PTCH1-204ENST00000375290 C1orf210Q8IVY1 113 aa8.59□□□□□ -1.03
PTCH1-204ENST00000375290 FABP5P3A8MUU1 101 aa8.59□□□□□ -1.03
PTCH1-204ENST00000375290 H3BUT2 72 aa8.59□□□□□ -1.03
PTCH1-204ENST00000375290 SPINT1O43278 529 aa8.59□□□□□ -1.03
PTCH1-204ENST00000375290 ESPL1Q14674 2120 aa8.59□□□□□ -1.03
PTCH1-204ENST00000375290 NMSQ5H8A3 153 aa8.59□□□□□ -1.03
PTCH1-204ENST00000375290 COX11Q9Y6N1 276 aa8.59□□□□□ -1.03
PTCH1-204ENST00000375290 GAGE12BA1L429 117 aa8.59□□□□□ -1.03
PTCH1-204ENST00000375290 E9PQ18 207 aa8.59□□□□□ -1.03
PTCH1-204ENST00000375290 PATE4P0C8F1 98 aa8.59□□□□□ -1.03
PTCH1-204ENST00000375290 FXYD3Q14802 87 aa8.59□□□□□ -1.03
PTCH1-204ENST00000375290 A0A0G2JLM5 398 aa8.59□□□□□ -1.03
PTCH1-204ENST00000375290 NTN1O95631 604 aa8.59□□□□□ -1.03
PTCH1-204ENST00000375290 GOLT1AQ6ZVE7 132 aa8.59□□□□□ -1.03
PTCH1-204ENST00000375290 TIMP4Q99727 224 aa8.59□□□□□ -1.03
PTCH1-204ENST00000375290 GAGE2BQ13066 116 aa8.59□□□□□ -1.03
PTCH1-204ENST00000375290 PRSS53Q2L4Q9 553 aa8.59□□□□□ -1.03
PTCH1-204ENST00000375290 GAGE2EQ4V326 116 aa8.59□□□□□ -1.03
PTCH1-204ENST00000375290 DLX4Q92988 240 aaPredicted RBP8.59□□□□□ -1.03
PTCH1-204ENST00000375290 GAGE2DQ9UEU5 116 aa8.59□□□□□ -1.03
PTCH1-204ENST00000375290 H0YIZ8 118 aa8.58□□□□□ -1.04
PTCH1-204ENST00000375290 CGAP01215 116 aa8.58□□□□□ -1.04
PTCH1-204ENST00000375290 IGKCP01834 107 aa8.58□□□□□ -1.04
PTCH1-204ENST00000375290 ZNF441Q8N8Z8 693 aa8.58□□□□□ -1.04
PTCH1-204ENST00000375290 FAM57AQ8TBR7 257 aa8.58□□□□□ -1.04
PTCH1-204ENST00000375290 NEU1Q99519 415 aa8.58□□□□□ -1.04
PTCH1-204ENST00000375290 RRHO14718 337 aa8.58□□□□□ -1.04
PTCH1-204ENST00000375290 IGHV2-5P01817 119 aa8.58□□□□□ -1.04
PTCH1-204ENST00000375290 MORN3Q6PF18 240 aaPredicted RBP8.58□□□□□ -1.04
PTCH1-204ENST00000375290 MYLKQ15746 1914 aa8.58□□□□□ -1.04
PTCH1-204ENST00000375290 SMRP1Q8NCR6 262 aa8.58□□□□□ -1.04
PTCH1-204ENST00000375290 PRR7Q8TB68 274 aa8.58□□□□□ -1.04
PTCH1-204ENST00000375290 CHTOPQ9Y3Y2 248 aaKnown RBP8.58□□□□□ -1.04
PTCH1-204ENST00000375290 IGHV3-64DA0A0J9YX35 117 aa8.58□□□□□ -1.04
PTCH1-204ENST00000375290 SCO2A0A1W2PP80 73 aa8.58□□□□□ -1.04
PTCH1-204ENST00000375290 RNF224P0DH78 156 aa8.58□□□□□ -1.04
PTCH1-204ENST00000375290 COL9A1P20849 921 aa8.58□□□□□ -1.04
PTCH1-204ENST00000375290 SIVA1O15304 175 aa8.58□□□□□ -1.04
PTCH1-204ENST00000375290 SSTR5P35346 364 aa8.58□□□□□ -1.04
PTCH1-204ENST00000375290 EFNB3Q15768 340 aa8.58□□□□□ -1.04
PTCH1-204ENST00000375290 B9A039 149 aa8.58□□□□□ -1.04
PTCH1-204ENST00000375290 C12orf77C9JDV5 145 aa8.58□□□□□ -1.04
PTCH1-204ENST00000375290 SCGB3A1Q96QR1 104 aa8.58□□□□□ -1.04
PTCH1-204ENST00000375290 EPDR1Q9UM22 224 aa8.58□□□□□ -1.04
PTCH1-204ENST00000375290 PRSS2P07478 247 aa8.58□□□□□ -1.04
PTCH1-204ENST00000375290 ID4P47928 161 aa8.58□□□□□ -1.04
PTCH1-204ENST00000375290 PROB1E7EW31 1015 aa8.57□□□□□ -1.04
PTCH1-204ENST00000375290 DEFB109BQ30KR1 87 aa8.57□□□□□ -1.04
PTCH1-204ENST00000375290 CHCHD2Q9Y6H1 151 aaPredicted RBP8.57□□□□□ -1.04
PTCH1-204ENST00000375290 A0A0G2JMM0 328 aa8.57□□□□□ -1.04
PTCH1-204ENST00000375290 A0A1W2PPB8 328 aa8.57□□□□□ -1.04
PTCH1-204ENST00000375290 KIR3DP1A8MWS1 328 aa8.57□□□□□ -1.04
PTCH1-204ENST00000375290 SUPT4H1P63272 117 aaKnown RBP8.57□□□□□ -1.04
PTCH1-204ENST00000375290 MBNL2Q5VZF2 373 aaKnown RBP8.57□□□□□ -1.04
PTCH1-204ENST00000375290 PAQR4Q8N4S7 273 aaPredicted RBP8.57□□□□□ -1.04
PTCH1-204ENST00000375290 RNF182Q8N6D2 247 aa8.57□□□□□ -1.04
PTCH1-204ENST00000375290 PTPRDP23468 1912 aa8.57□□□□□ -1.04
PTCH1-204ENST00000375290 DNASE2BQ8WZ79 361 aa8.57□□□□□ -1.04
PTCH1-204ENST00000375290 C11orf68Q9H3H3 251 aaKnown RBP8.57□□□□□ -1.04
PTCH1-204ENST00000375290 NAPSAO96009 420 aa8.57□□□□□ -1.04
PTCH1-204ENST00000375290 COX7A1P24310 79 aa8.57□□□□□ -1.04
PTCH1-204ENST00000375290 ZNF585BQ52M93 769 aa8.57□□□□□ -1.04
PTCH1-204ENST00000375290 C8orf46Q8TAG6 207 aa8.57□□□□□ -1.04
PTCH1-204ENST00000375290 ANAPC10Q9UM13 185 aa8.57□□□□□ -1.04
PTCH1-204ENST00000375290 K7EMI3 77 aa8.57□□□□□ -1.04
PTCH1-204ENST00000375290 ALPK2Q86TB3 2170 aa8.57□□□□□ -1.04
PTCH1-204ENST00000375290 IFI27P40305 119 aaPredicted RBP8.57□□□□□ -1.04
PTCH1-204ENST00000375290 FCGR2BP31994 310 aaPredicted RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms