RNA–Protein interactions for RNA: ENST00000374940.3

HLA-DQA2-210, Transcript of major histocompatibility complex, class II, DQ alpha 2, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA2, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2-210ENST00000374940 DPF1Q92782 380 aa9.5□□□□□ -0.89
HLA-DQA2-210ENST00000374940 FANCD2OSQ96PS1 177 aa9.5□□□□□ -0.89
HLA-DQA2-210ENST00000374940 DUX3Q96PT4 197 aa9.5□□□□□ -0.89
HLA-DQA2-210ENST00000374940 ALX4Q9H161 411 aaPredicted RBP9.5□□□□□ -0.89
HLA-DQA2-210ENST00000374940 PLEKHA3Q9HB20 300 aa9.5□□□□□ -0.89
HLA-DQA2-210ENST00000374940 THYN1Q9P016 225 aa9.5□□□□□ -0.89
HLA-DQA2-210ENST00000374940 CACNG5Q9UF02 275 aa9.5□□□□□ -0.89
HLA-DQA2-210ENST00000374940 CACFD1Q9UGQ2 172 aa9.5□□□□□ -0.89
HLA-DQA2-210ENST00000374940 FBXL7Q9UJT9 491 aa9.5□□□□□ -0.89
HLA-DQA2-210ENST00000374940 IGLV11-55A0A075B6I3 123 aa9.49□□□□□ -0.89
HLA-DQA2-210ENST00000374940 C9orf170A2RU37 121 aa9.49□□□□□ -0.89
HLA-DQA2-210ENST00000374940 INS-IGF2F8WCM5 200 aa9.49□□□□□ -0.89
HLA-DQA2-210ENST00000374940 HSPB1P04792 205 aaKnown RBP9.49□□□□□ -0.89
HLA-DQA2-210ENST00000374940 OR8U8P0C7N1 319 aa9.49□□□□□ -0.89
HLA-DQA2-210ENST00000374940 SULT1A3P0DMM9 295 aa9.49□□□□□ -0.89
HLA-DQA2-210ENST00000374940 SULT1A4P0DMN0 295 aa9.49□□□□□ -0.89
HLA-DQA2-210ENST00000374940 CD33P20138 364 aa9.49□□□□□ -0.89
HLA-DQA2-210ENST00000374940 ERHP84090 104 aaKnown RBP9.49□□□□□ -0.89
HLA-DQA2-210ENST00000374940 DEFA5Q01523 94 aa9.49□□□□□ -0.89
HLA-DQA2-210ENST00000374940 DHRS2Q13268 280 aa9.49□□□□□ -0.89
HLA-DQA2-210ENST00000374940 C4orf46Q504U0 113 aa9.49□□□□□ -0.89
HLA-DQA2-210ENST00000374940 NMSQ5H8A3 153 aa9.49□□□□□ -0.89
HLA-DQA2-210ENST00000374940 ZNF343Q6P1L6 599 aa9.49□□□□□ -0.89
HLA-DQA2-210ENST00000374940 LYG2Q86SG7 212 aa9.49□□□□□ -0.89
HLA-DQA2-210ENST00000374940 OR1L6Q8NGR2 347 aa9.49□□□□□ -0.89
HLA-DQA2-210ENST00000374940 OR52E5Q8NH55 327 aa9.49□□□□□ -0.89
HLA-DQA2-210ENST00000374940 RANGRFQ9HD47 186 aaPredicted RBP9.49□□□□□ -0.89
HLA-DQA2-210ENST00000374940 F11RQ9Y624 299 aaKnown RBP9.49□□□□□ -0.89
HLA-DQA2-210ENST00000374940 LINC01619G3V211 115 aa9.48□□□□□ -0.89
HLA-DQA2-210ENST00000374940 SPCS3P61009 180 aa9.48□□□□□ -0.89
HLA-DQA2-210ENST00000374940 C15orf32Q32M92 178 aa9.48□□□□□ -0.89
HLA-DQA2-210ENST00000374940 FAM209BQ5JX69 171 aa9.48□□□□□ -0.89
HLA-DQA2-210ENST00000374940 OR2C3Q8N628 320 aa9.48□□□□□ -0.89
HLA-DQA2-210ENST00000374940 COQ8AQ8NI60 647 aa9.48□□□□□ -0.89
HLA-DQA2-210ENST00000374940 NUDT15Q9NV35 164 aa9.48□□□□□ -0.89
HLA-DQA2-210ENST00000374940 TMED3Q9Y3Q3 217 aa9.48□□□□□ -0.89
HLA-DQA2-210ENST00000374940 CMYA5Q8N3K9 4069 aa9.47□□□□□ -0.89
HLA-DQA2-210ENST00000374940 TRAV6A0A075B6T7 132 aa9.47□□□□□ -0.89
HLA-DQA2-210ENST00000374940 A0A1B0GU03 582 aa9.47□□□□□ -0.89
HLA-DQA2-210ENST00000374940 NDUFB8O95169 186 aa9.47□□□□□ -0.89
HLA-DQA2-210ENST00000374940 DUS4LO95620 317 aaKnown RBP9.47□□□□□ -0.89
HLA-DQA2-210ENST00000374940 H2AFB2P0C5Z0 115 aa9.47□□□□□ -0.89
HLA-DQA2-210ENST00000374940 DEFA1P59665 94 aa9.47□□□□□ -0.89
HLA-DQA2-210ENST00000374940 DEFA3P59666 94 aa9.47□□□□□ -0.89
HLA-DQA2-210ENST00000374940 EXOSC2Q13868 293 aaKnown RBP9.47□□□□□ -0.89
HLA-DQA2-210ENST00000374940 SMCO1Q147U7 214 aa9.47□□□□□ -0.89
HLA-DQA2-210ENST00000374940 PDLIM3Q53GG5 364 aaPredicted RBP9.47□□□□□ -0.89
HLA-DQA2-210ENST00000374940 SPINK9Q5DT21 86 aa9.47□□□□□ -0.89
HLA-DQA2-210ENST00000374940 SLC25A24Q6NUK1 477 aa9.47□□□□□ -0.89
HLA-DQA2-210ENST00000374940 ZNF114Q8NC26 417 aa9.47□□□□□ -0.89
HLA-DQA2-210ENST00000374940 OR1P1Q8NH06 330 aa9.47□□□□□ -0.89
HLA-DQA2-210ENST00000374940 ENKURQ8TC29 256 aa9.47□□□□□ -0.89
HLA-DQA2-210ENST00000374940 ENY2Q9NPA8 101 aa9.47□□□□□ -0.89
HLA-DQA2-210ENST00000374940 PEF1Q9UBV8 284 aaKnown RBP9.47□□□□□ -0.89
HLA-DQA2-210ENST00000374940 DMRT1Q9Y5R6 373 aa9.47□□□□□ -0.89
HLA-DQA2-210ENST00000374940 IGHV4OR15-8A0A075B7B6 117 aa9.46□□□□□ -0.89
HLA-DQA2-210ENST00000374940 A0A087WW49 117 aa9.46□□□□□ -0.89
HLA-DQA2-210ENST00000374940 ANKRD34BA5PLL1 514 aa9.46□□□□□ -0.89
HLA-DQA2-210ENST00000374940 SLC25A6P12236 298 aa9.46□□□□□ -0.89
HLA-DQA2-210ENST00000374940 SNCAP37840 140 aa9.46□□□□□ -0.89
HLA-DQA2-210ENST00000374940 HOXA1P49639 335 aaPredicted RBP9.46□□□□□ -0.89
HLA-DQA2-210ENST00000374940 EEF1AKMT3Q96AZ1 226 aa9.46□□□□□ -0.89
HLA-DQA2-210ENST00000374940 RCC1LQ96I51 464 aaKnown RBP9.46□□□□□ -0.89
HLA-DQA2-210ENST00000374940 CXorf58Q96LI9 332 aa9.46□□□□□ -0.89
HLA-DQA2-210ENST00000374940 MGAM2Q2M2H8 2515 aa9.46□□□□□ -0.89
HLA-DQA2-210ENST00000374940 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.46□□□□□ -0.9
HLA-DQA2-210ENST00000374940 HOXB5P09067 269 aa9.46□□□□□ -0.9
HLA-DQA2-210ENST00000374940 ZP3P21754 424 aa9.46□□□□□ -0.9
HLA-DQA2-210ENST00000374940 SUB1P53999 127 aaKnown RBP eCLIP9.46□□□□□ -0.9
HLA-DQA2-210ENST00000374940 MFAP2P55001 183 aa9.46□□□□□ -0.9
HLA-DQA2-210ENST00000374940 DUSP18Q8NEJ0 188 aa9.46□□□□□ -0.9
HLA-DQA2-210ENST00000374940 MITD1Q8WV92 249 aa9.46□□□□□ -0.9
HLA-DQA2-210ENST00000374940 MCRIP2Q9BUT9 160 aaKnown RBP9.46□□□□□ -0.9
HLA-DQA2-210ENST00000374940 WNK1Q9H4A3 2382 aa9.45□□□□□ -0.9
HLA-DQA2-210ENST00000374940 TRBV7-1A0A0A6YYK4 115 aa9.45□□□□□ -0.9
HLA-DQA2-210ENST00000374940 CEBPZOSA8MTT3 80 aa9.45□□□□□ -0.9
HLA-DQA2-210ENST00000374940 HOXD3P31249 432 aaPredicted RBP9.45□□□□□ -0.9
HLA-DQA2-210ENST00000374940 SLURP1P55000 103 aa9.45□□□□□ -0.9
HLA-DQA2-210ENST00000374940 TNFRSF9Q07011 255 aa9.45□□□□□ -0.9
HLA-DQA2-210ENST00000374940 GGNBP1Q5YKI7 109 aa9.45□□□□□ -0.9
HLA-DQA2-210ENST00000374940 NRARPQ7Z6K4 114 aa9.45□□□□□ -0.9
HLA-DQA2-210ENST00000374940 OR52B4Q8NGK2 314 aa9.45□□□□□ -0.9
HLA-DQA2-210ENST00000374940 OR1S1Q8NH92 325 aa9.45□□□□□ -0.9
HLA-DQA2-210ENST00000374940 VN1R17PQ8TDU5 208 aa9.45□□□□□ -0.9
HLA-DQA2-210ENST00000374940 HSPB7Q9UBY9 170 aa9.45□□□□□ -0.9
HLA-DQA2-210ENST00000374940 FBN3Q75N90 2809 aa9.44□□□□□ -0.9
HLA-DQA2-210ENST00000374940 MFSD2BA6NFX1 497 aa9.44□□□□□ -0.9
HLA-DQA2-210ENST00000374940 PITX3O75364 302 aa9.44□□□□□ -0.9
HLA-DQA2-210ENST00000374940 IFNA21P01568 189 aa9.44□□□□□ -0.9
HLA-DQA2-210ENST00000374940 TRBV12-3P01733 135 aa9.44□□□□□ -0.9
HLA-DQA2-210ENST00000374940 IGLL1P15814 213 aa9.44□□□□□ -0.9
HLA-DQA2-210ENST00000374940 HTR2BP41595 481 aa9.44□□□□□ -0.9
HLA-DQA2-210ENST00000374940 ZNF431Q8TF32 576 aaPredicted RBP9.44□□□□□ -0.9
HLA-DQA2-210ENST00000374940 DCUN1D4Q92564 292 aa9.44□□□□□ -0.9
HLA-DQA2-210ENST00000374940 DLX4Q92988 240 aaPredicted RBP9.44□□□□□ -0.9
HLA-DQA2-210ENST00000374940 GPR61Q9BZJ8 451 aa9.44□□□□□ -0.9
HLA-DQA2-210ENST00000374940 HIPK2Q9H2X6 1198 aa9.44□□□□□ -0.9
HLA-DQA2-210ENST00000374940 HEYLQ9NQ87 328 aaPredicted RBP9.44□□□□□ -0.9
HLA-DQA2-210ENST00000374940 FAM90A26D6RGX4 464 aa9.43□□□□□ -0.9
HLA-DQA2-210ENST00000374940 G3V4G9 280 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms