RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 RBMS3Q6XE24 437 aaKnown RBP13.6□□□□□ -0.23
HLA-DMA-201ENST00000374843 STX12Q86Y82 276 aa13.6□□□□□ -0.23
HLA-DMA-201ENST00000374843 FBXO7Q9Y3I1 522 aa13.6□□□□□ -0.23
HLA-DMA-201ENST00000374843 ZFHX3Q15911 3703 aa13.59□□□□□ -0.23
HLA-DMA-201ENST00000374843 DNAJC9-AS1A6NH13 148 aa13.59□□□□□ -0.23
HLA-DMA-201ENST00000374843 PMS2P5A8MQ11 134 aa13.59□□□□□ -0.23
HLA-DMA-201ENST00000374843 NPIPB5A8MRT5 1133 aa13.59□□□□□ -0.23
HLA-DMA-201ENST00000374843 IGHG2P01859 326 aa13.59□□□□□ -0.23
HLA-DMA-201ENST00000374843 OR13C7P0DN81 318 aa13.59□□□□□ -0.23
HLA-DMA-201ENST00000374843 AREGP15514 252 aa13.59□□□□□ -0.23
HLA-DMA-201ENST00000374843 TMEM267Q0VDI3 215 aaPredicted RBP13.59□□□□□ -0.23
HLA-DMA-201ENST00000374843 ASPHD1Q5U4P2 390 aa13.59□□□□□ -0.23
HLA-DMA-201ENST00000374843 HAPLN4Q86UW8 402 aa13.59□□□□□ -0.23
HLA-DMA-201ENST00000374843 SGMS2Q8NHU3 365 aa13.59□□□□□ -0.23
HLA-DMA-201ENST00000374843 INAFM1C9JVW0 142 aa13.58□□□□□ -0.24
HLA-DMA-201ENST00000374843 PRSS46E5RG02 174 aa13.58□□□□□ -0.24
HLA-DMA-201ENST00000374843 ATP6V0E1O15342 81 aa13.58□□□□□ -0.24
HLA-DMA-201ENST00000374843 BCL2L11O43521 198 aa13.58□□□□□ -0.24
HLA-DMA-201ENST00000374843 IFNA10P01566 189 aa13.58□□□□□ -0.24
HLA-DMA-201ENST00000374843 IGF1P05019 195 aa13.58□□□□□ -0.24
HLA-DMA-201ENST00000374843 CRYGCP07315 174 aa13.58□□□□□ -0.24
HLA-DMA-201ENST00000374843 METTL15P1P0C7V9 234 aa13.58□□□□□ -0.24
HLA-DMA-201ENST00000374843 CTRB1P17538 263 aa13.58□□□□□ -0.24
HLA-DMA-201ENST00000374843 S100A11P31949 105 aa13.58□□□□□ -0.24
HLA-DMA-201ENST00000374843 C19orf54Q5BKX5 351 aa13.58□□□□□ -0.24
HLA-DMA-201ENST00000374843 CTRB2Q6GPI1 263 aa13.58□□□□□ -0.24
HLA-DMA-201ENST00000374843 TMUB2Q71RG4 321 aa13.58□□□□□ -0.24
HLA-DMA-201ENST00000374843 TMEM68Q96MH6 324 aa13.58□□□□□ -0.24
HLA-DMA-201ENST00000374843 P2RX4Q99571 388 aa13.58□□□□□ -0.24
HLA-DMA-201ENST00000374843 PARP11Q9NR21 331 aa13.58□□□□□ -0.24
HLA-DMA-201ENST00000374843 MTORP42345 2549 aa13.57□□□□□ -0.24
HLA-DMA-201ENST00000374843 SH2D7A6NKC9 451 aaPredicted RBP13.57□□□□□ -0.24
HLA-DMA-201ENST00000374843 OR8U8P0C7N1 319 aa13.57□□□□□ -0.24
HLA-DMA-201ENST00000374843 FAM157CP0CG43 387 aa13.57□□□□□ -0.24
HLA-DMA-201ENST00000374843 C4BPBP20851 252 aa13.57□□□□□ -0.24
HLA-DMA-201ENST00000374843 SNCAP37840 140 aa13.57□□□□□ -0.24
HLA-DMA-201ENST00000374843 RAB11AP62491 216 aa13.57□□□□□ -0.24
HLA-DMA-201ENST00000374843 KLK9Q2XQG4 91 aa13.57□□□□□ -0.24
HLA-DMA-201ENST00000374843 OR1P1Q8NH06 330 aa13.57□□□□□ -0.24
HLA-DMA-201ENST00000374843 ABHD5Q8WTS1 349 aa13.57□□□□□ -0.24
HLA-DMA-201ENST00000374843 BSCL2Q96G97 398 aaPredicted RBP13.57□□□□□ -0.24
HLA-DMA-201ENST00000374843 FAM103A1Q9BTL3 118 aaKnown RBP13.57□□□□□ -0.24
HLA-DMA-201ENST00000374843 NPFFR1Q9GZQ6 430 aa13.57□□□□□ -0.24
HLA-DMA-201ENST00000374843 ARL6Q9H0F7 186 aa13.57□□□□□ -0.24
HLA-DMA-201ENST00000374843 ESM1Q9NQ30 184 aa13.57□□□□□ -0.24
HLA-DMA-201ENST00000374843 FBXL17Q9UF56 701 aa13.57□□□□□ -0.24
HLA-DMA-201ENST00000374843 KLK9Q9UKQ9 250 aa13.57□□□□□ -0.24
HLA-DMA-201ENST00000374843 F11RQ9Y624 299 aaKnown RBP13.57□□□□□ -0.24
HLA-DMA-201ENST00000374843 PLXNB1O43157 2135 aa13.57□□□□□ -0.24
HLA-DMA-201ENST00000374843 F8P00451 2351 aa13.56□□□□□ -0.24
HLA-DMA-201ENST00000374843 CST7O76096 145 aa13.56□□□□□ -0.24
HLA-DMA-201ENST00000374843 AP2S1P53680 142 aaPredicted RBP13.56□□□□□ -0.24
HLA-DMA-201ENST00000374843 SUB1P53999 127 aaKnown RBP eCLIP13.56□□□□□ -0.24
HLA-DMA-201ENST00000374843 HILS1P60008 231 aa13.56□□□□□ -0.24
HLA-DMA-201ENST00000374843 RPL15P61313 204 aaKnown RBP13.56□□□□□ -0.24
HLA-DMA-201ENST00000374843 BLCAPP62952 87 aa13.56□□□□□ -0.24
HLA-DMA-201ENST00000374843 HBG1P69891 147 aa13.56□□□□□ -0.24
HLA-DMA-201ENST00000374843 HBG2P69892 147 aa13.56□□□□□ -0.24
HLA-DMA-201ENST00000374843 NHLH2Q02577 135 aa13.56□□□□□ -0.24
HLA-DMA-201ENST00000374843 ARL16Q0P5N6 197 aa13.56□□□□□ -0.24
HLA-DMA-201ENST00000374843 SLC35E3Q7Z769 313 aa13.56□□□□□ -0.24
HLA-DMA-201ENST00000374843 Q8N2B8 174 aa13.56□□□□□ -0.24
HLA-DMA-201ENST00000374843 TTC9CQ8N5M4 171 aa13.56□□□□□ -0.24
HLA-DMA-201ENST00000374843 ZNF418Q8TF45 676 aaPredicted RBP13.56□□□□□ -0.24
HLA-DMA-201ENST00000374843 ARPC5LQ9BPX5 153 aa13.56□□□□□ -0.24
HLA-DMA-201ENST00000374843 ZC4H2Q9NQZ6 224 aa13.56□□□□□ -0.24
HLA-DMA-201ENST00000374843 TAAR5O14804 337 aa13.55□□□□□ -0.24
HLA-DMA-201ENST00000374843 FBXO24O75426 580 aa13.55□□□□□ -0.24
HLA-DMA-201ENST00000374843 CRLF1O75462 422 aa13.55□□□□□ -0.24
HLA-DMA-201ENST00000374843 REG1AP05451 166 aa13.55□□□□□ -0.24
HLA-DMA-201ENST00000374843 RNASE1P07998 156 aaKnown RBP13.55□□□□□ -0.24
HLA-DMA-201ENST00000374843 AKIRIN2Q53H80 203 aa13.55□□□□□ -0.24
HLA-DMA-201ENST00000374843 ETV3LQ6ZN32 361 aa13.55□□□□□ -0.24
HLA-DMA-201ENST00000374843 Q71RC1 249 aaPredicted RBP13.55□□□□□ -0.24
HLA-DMA-201ENST00000374843 OR1S2Q8NGQ3 325 aa13.55□□□□□ -0.24
HLA-DMA-201ENST00000374843 OR1L6Q8NGR2 347 aa13.55□□□□□ -0.24
HLA-DMA-201ENST00000374843 FAM110DQ8TAY7 271 aaPredicted RBP13.55□□□□□ -0.24
HLA-DMA-201ENST00000374843 RNASEH2CQ8TDP1 164 aaKnown RBP13.55□□□□□ -0.24
HLA-DMA-201ENST00000374843 PINX1Q96BK5 328 aaKnown RBP13.55□□□□□ -0.24
HLA-DMA-201ENST00000374843 TNFRSF19Q9NS68 423 aa13.55□□□□□ -0.24
HLA-DMA-201ENST00000374843 BOLA1Q9Y3E2 137 aa13.55□□□□□ -0.24
HLA-DMA-201ENST00000374843 KANTRA0A1W2PQU2 76 aa13.54□□□□□ -0.24
HLA-DMA-201ENST00000374843 LINC01548A6NM66 108 aa13.54□□□□□ -0.24
HLA-DMA-201ENST00000374843 AP4M1O00189 453 aa13.54□□□□□ -0.24
HLA-DMA-201ENST00000374843 APELAP0DMC3 54 aa13.54□□□□□ -0.24
HLA-DMA-201ENST00000374843 MFAP2P55001 183 aa13.54□□□□□ -0.24
HLA-DMA-201ENST00000374843 SLC38A11Q08AI6 406 aa13.54□□□□□ -0.24
HLA-DMA-201ENST00000374843 OPCMLQ14982 345 aa13.54□□□□□ -0.24
HLA-DMA-201ENST00000374843 VWC2Q2TAL6 325 aa13.54□□□□□ -0.24
HLA-DMA-201ENST00000374843 LFNGQ8NES3 379 aa13.54□□□□□ -0.24
HLA-DMA-201ENST00000374843 OR10P1Q8NGE3 313 aa13.54□□□□□ -0.24
HLA-DMA-201ENST00000374843 OR5C1Q8NGR4 320 aa13.54□□□□□ -0.24
HLA-DMA-201ENST00000374843 GGACTQ9BVM4 153 aa13.54□□□□□ -0.24
HLA-DMA-201ENST00000374843 ZNF702PQ9H963 129 aa13.54□□□□□ -0.24
HLA-DMA-201ENST00000374843 CYTL1Q9NRR1 136 aa13.54□□□□□ -0.24
HLA-DMA-201ENST00000374843 DMRT1Q9Y5R6 373 aa13.54□□□□□ -0.24
HLA-DMA-201ENST00000374843 FNDC10F2Z333 226 aa13.53□□□□□ -0.24
HLA-DMA-201ENST00000374843 CORTO00230 105 aa13.53□□□□□ -0.24
HLA-DMA-201ENST00000374843 IFNA4P05014 189 aa13.53□□□□□ -0.24
HLA-DMA-201ENST00000374843 DLK1P80370 383 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms