RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 CATR1Q13166 79 aa10.67□□□□□ -0.7
PRPF4-201ENST00000374198 EIF4EBP1Q13541 118 aaPredicted RBP10.67□□□□□ -0.7
PRPF4-201ENST00000374198 TMEM97Q5BJF2 176 aa10.67□□□□□ -0.7
PRPF4-201ENST00000374198 FAM162BQ5T6X4 162 aa10.67□□□□□ -0.7
PRPF4-201ENST00000374198 COLCA1Q6ZS62 124 aa10.67□□□□□ -0.7
PRPF4-201ENST00000374198 C2orf91Q6ZV80 131 aa10.67□□□□□ -0.7
PRPF4-201ENST00000374198 ZNF808Q8N4W9 903 aaPredicted RBP10.67□□□□□ -0.7
PRPF4-201ENST00000374198 FOXB1Q99853 325 aa10.67□□□□□ -0.7
PRPF4-201ENST00000374198 ZIC3O60481 467 aa10.66□□□□□ -0.7
PRPF4-201ENST00000374198 LEPROTL1O95214 131 aa10.66□□□□□ -0.7
PRPF4-201ENST00000374198 TMPRSS3P57727 454 aa10.66□□□□□ -0.7
PRPF4-201ENST00000374198 RAB31Q13636 194 aa10.66□□□□□ -0.7
PRPF4-201ENST00000374198 ZNF497Q6ZNH5 498 aa10.66□□□□□ -0.7
PRPF4-201ENST00000374198 SSBP4Q9BWG4 385 aaPredicted RBP10.66□□□□□ -0.7
PRPF4-201ENST00000374198 SSBP3Q9BWW4 388 aaPredicted RBP10.66□□□□□ -0.7
PRPF4-201ENST00000374198 PPOXP50336 477 aa10.66□□□□□ -0.7
PRPF4-201ENST00000374198 FOXE3Q13461 319 aa10.66□□□□□ -0.7
PRPF4-201ENST00000374198 OR2K2Q8NGT1 345 aa10.66□□□□□ -0.7
PRPF4-201ENST00000374198 IGF2BP2-AS1Q96M15 143 aa10.66□□□□□ -0.7
PRPF4-201ENST00000374198 TRIB1Q96RU8 372 aa10.66□□□□□ -0.7
PRPF4-201ENST00000374198 ATP6V0BQ99437 205 aa10.66□□□□□ -0.7
PRPF4-201ENST00000374198 NPFFR1Q9GZQ6 430 aa10.66□□□□□ -0.7
PRPF4-201ENST00000374198 KCNIP1Q9NZI2 227 aa10.66□□□□□ -0.7
PRPF4-201ENST00000374198 LSM4Q9Y4Z0 139 aaKnown RBP10.66□□□□□ -0.7
PRPF4-201ENST00000374198 DIDO1Q9BTC0 2240 aaKnown RBP10.66□□□□□ -0.7
PRPF4-201ENST00000374198 SPTBN4Q9H254 2564 aa10.66□□□□□ -0.7
PRPF4-201ENST00000374198 IGHV1-24A0A0C4DH33 117 aa10.65□□□□□ -0.7
PRPF4-201ENST00000374198 PRSS46E5RG02 174 aa10.65□□□□□ -0.7
PRPF4-201ENST00000374198 H3BUT2 72 aa10.65□□□□□ -0.7
PRPF4-201ENST00000374198 P04436 131 aa10.65□□□□□ -0.7
PRPF4-201ENST00000374198 SPINK2P20155 84 aa10.65□□□□□ -0.7
PRPF4-201ENST00000374198 PLP1P60201 277 aa10.65□□□□□ -0.7
PRPF4-201ENST00000374198 CEACAM16Q2WEN9 425 aa10.65□□□□□ -0.7
PRPF4-201ENST00000374198 Q6P435 159 aa10.65□□□□□ -0.7
PRPF4-201ENST00000374198 BPIFA4PQ86YQ2 179 aa10.65□□□□□ -0.7
PRPF4-201ENST00000374198 STPG3Q8N7X2 389 aa10.65□□□□□ -0.7
PRPF4-201ENST00000374198 SPACA9Q96E40 222 aaPredicted RBP10.65□□□□□ -0.7
PRPF4-201ENST00000374198 C1orf159Q96HA4 380 aa10.65□□□□□ -0.7
PRPF4-201ENST00000374198 SIGMAR1Q99720 223 aa10.65□□□□□ -0.7
PRPF4-201ENST00000374198 CFAP54Q96N23 3096 aa10.65□□□□□ -0.7
PRPF4-201ENST00000374198 SMPD2O60906 423 aa10.65□□□□□ -0.7
PRPF4-201ENST00000374198 ZFAND5O76080 213 aa10.65□□□□□ -0.7
PRPF4-201ENST00000374198 APOA2P02652 100 aa10.65□□□□□ -0.7
PRPF4-201ENST00000374198 COX8AP10176 69 aa10.65□□□□□ -0.7
PRPF4-201ENST00000374198 PSG5Q15238 335 aa10.65□□□□□ -0.7
PRPF4-201ENST00000374198 NUP35Q8NFH5 326 aa10.65□□□□□ -0.7
PRPF4-201ENST00000374198 OR2V2Q96R30 315 aa10.65□□□□□ -0.7
PRPF4-201ENST00000374198 PMCHL2Q9BQD1 86 aa10.65□□□□□ -0.7
PRPF4-201ENST00000374198 SRXN1Q9BYN0 137 aa10.65□□□□□ -0.7
PRPF4-201ENST00000374198 GTSF1LQ9H1H1 148 aa10.65□□□□□ -0.7
PRPF4-201ENST00000374198 JKAMPQ9P055 326 aa10.65□□□□□ -0.7
PRPF4-201ENST00000374198 A0A0J9YW62 118 aa10.65□□□□□ -0.71
PRPF4-201ENST00000374198 CDX4O14627 284 aaPredicted RBP10.65□□□□□ -0.71
PRPF4-201ENST00000374198 UQCRFS1P47985 274 aa10.65□□□□□ -0.71
PRPF4-201ENST00000374198 SMAGPQ0VAQ4 97 aa10.65□□□□□ -0.71
PRPF4-201ENST00000374198 SCGB2A2Q13296 93 aa10.65□□□□□ -0.71
PRPF4-201ENST00000374198 FAM214BQ7L5A3 538 aa10.65□□□□□ -0.71
PRPF4-201ENST00000374198 MRPL21Q7Z2W9 205 aaKnown RBP10.65□□□□□ -0.71
PRPF4-201ENST00000374198 OR10AG1Q8NH19 301 aa10.65□□□□□ -0.71
PRPF4-201ENST00000374198 OR52E5Q8NH55 327 aa10.65□□□□□ -0.71
PRPF4-201ENST00000374198 OR4A5Q8NH83 315 aa10.65□□□□□ -0.71
PRPF4-201ENST00000374198 SH2D2AQ9NP31 389 aa10.65□□□□□ -0.71
PRPF4-201ENST00000374198 TMEM167BQ9NRX6 74 aa10.65□□□□□ -0.71
PRPF4-201ENST00000374198 FER1L5A0AVI2 2057 aa10.64□□□□□ -0.71
PRPF4-201ENST00000374198 ZNHIT1O43257 154 aa10.64□□□□□ -0.71
PRPF4-201ENST00000374198 RHBDL1O75783 438 aa10.64□□□□□ -0.71
PRPF4-201ENST00000374198 HIST1H1EP10412 219 aaKnown RBP10.64□□□□□ -0.71
PRPF4-201ENST00000374198 TMEM251Q8N6I4 163 aa10.64□□□□□ -0.71
PRPF4-201ENST00000374198 CHCHD1Q96BP2 118 aaKnown RBP10.64□□□□□ -0.71
PRPF4-201ENST00000374198 MBD6Q96DN6 1003 aa10.64□□□□□ -0.71
PRPF4-201ENST00000374198 MBNL3Q9NUK0 354 aaKnown RBP10.64□□□□□ -0.71
PRPF4-201ENST00000374198 PSG11Q9UQ72 335 aa10.64□□□□□ -0.71
PRPF4-201ENST00000374198 A6NDN8 102 aa10.64□□□□□ -0.71
PRPF4-201ENST00000374198 CER1O95813 267 aa10.64□□□□□ -0.71
PRPF4-201ENST00000374198 CCNOP22674 350 aa10.64□□□□□ -0.71
PRPF4-201ENST00000374198 WIPI1Q5MNZ9 446 aaPredicted RBP10.64□□□□□ -0.71
PRPF4-201ENST00000374198 ASPHD1Q5U4P2 390 aa10.64□□□□□ -0.71
PRPF4-201ENST00000374198 WDR82Q6UXN9 313 aa10.64□□□□□ -0.71
PRPF4-201ENST00000374198 MIR17HGQ75NE6 70 aa10.64□□□□□ -0.71
PRPF4-201ENST00000374198 OR5A1Q8NGJ0 315 aa10.64□□□□□ -0.71
PRPF4-201ENST00000374198 TAAR6Q96RI8 345 aa10.64□□□□□ -0.71
PRPF4-201ENST00000374198 ZNF355PQ9NSJ1 428 aa10.64□□□□□ -0.71
PRPF4-201ENST00000374198 SLC25A10Q9UBX3 287 aaPredicted RBP10.64□□□□□ -0.71
PRPF4-201ENST00000374198 CHCHD2Q9Y6H1 151 aaPredicted RBP10.64□□□□□ -0.71
PRPF4-201ENST00000374198 CNTRLQ7Z7A1 2325 aa10.64□□□□□ -0.71
PRPF4-201ENST00000374198 A0A0G2JLM5 398 aa10.63□□□□□ -0.71
PRPF4-201ENST00000374198 DKK1O94907 266 aa10.63□□□□□ -0.71
PRPF4-201ENST00000374198 CEACAM3P40198 252 aa10.63□□□□□ -0.71
PRPF4-201ENST00000374198 CAMPP49913 170 aa10.63□□□□□ -0.71
PRPF4-201ENST00000374198 AAED1Q7RTV5 226 aa10.63□□□□□ -0.71
PRPF4-201ENST00000374198 NHLRC2Q8NBF2 726 aa10.63□□□□□ -0.71
PRPF4-201ENST00000374198 POM121L2Q96KW2 1035 aa10.63□□□□□ -0.71
PRPF4-201ENST00000374198 MAP1LC3CQ9BXW4 147 aa10.63□□□□□ -0.71
PRPF4-201ENST00000374198 GCM1Q9NP62 436 aa10.63□□□□□ -0.71
PRPF4-201ENST00000374198 HEYLQ9NQ87 328 aaPredicted RBP10.63□□□□□ -0.71
PRPF4-201ENST00000374198 CACNA1EQ15878 2313 aa10.63□□□□□ -0.71
PRPF4-201ENST00000374198 GGTLC3B5MD39 225 aa10.63□□□□□ -0.71
PRPF4-201ENST00000374198 SNAI2O43623 268 aa10.63□□□□□ -0.71
PRPF4-201ENST00000374198 OR9G9P0C7N8 305 aa10.63□□□□□ -0.71
PRPF4-201ENST00000374198 WDR31Q8NA23 367 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms