RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 A0A1W2PPI3 338 aa15.76■□□□□ 0.11
HDAC1-201ENST00000373548 CRYGBP07316 175 aa15.76■□□□□ 0.11
HDAC1-201ENST00000373548 EFNA4P52798 201 aa15.76■□□□□ 0.11
HDAC1-201ENST00000373548 CD81P60033 236 aa15.76■□□□□ 0.11
HDAC1-201ENST00000373548 B2MP61769 119 aa15.76■□□□□ 0.11
HDAC1-201ENST00000373548 MLANAQ16655 118 aa15.76■□□□□ 0.11
HDAC1-201ENST00000373548 TMEM144Q7Z5S9 345 aa15.76■□□□□ 0.11
HDAC1-201ENST00000373548 STPG3Q8N7X2 389 aa15.76■□□□□ 0.11
HDAC1-201ENST00000373548 OR11H6Q8NGC7 330 aa15.76■□□□□ 0.11
HDAC1-201ENST00000373548 CFAP46Q8IYW2 2715 aa15.75■□□□□ 0.11
HDAC1-201ENST00000373548 RPL29P47914 159 aaKnown RBP15.75■□□□□ 0.11
HDAC1-201ENST00000373548 MEF2BQ02080 365 aaPredicted RBP15.75■□□□□ 0.11
HDAC1-201ENST00000373548 CD69Q07108 199 aa15.75■□□□□ 0.11
HDAC1-201ENST00000373548 RAB31Q13636 194 aa15.75■□□□□ 0.11
HDAC1-201ENST00000373548 GAMTQ14353 236 aa15.75■□□□□ 0.11
HDAC1-201ENST00000373548 SLC35E3Q7Z769 313 aa15.75■□□□□ 0.11
HDAC1-201ENST00000373548 IQCF2Q8IXL9 164 aa15.75■□□□□ 0.11
HDAC1-201ENST00000373548 NIPSNAP3BQ9BS92 247 aa15.75■□□□□ 0.11
HDAC1-201ENST00000373548 MANBALQ9NQG1 85 aa15.75■□□□□ 0.11
HDAC1-201ENST00000373548 A0A1W2PPV4 95 aa15.74■□□□□ 0.11
HDAC1-201ENST00000373548 COLCA2A8K830 154 aa15.74■□□□□ 0.11
HDAC1-201ENST00000373548 PSMB3P49720 205 aa15.74■□□□□ 0.11
HDAC1-201ENST00000373548 PSG5Q15238 335 aa15.74■□□□□ 0.11
HDAC1-201ENST00000373548 PRSS8Q16651 343 aa15.74■□□□□ 0.11
HDAC1-201ENST00000373548 HCP5Q6MZN7 132 aa15.74■□□□□ 0.11
HDAC1-201ENST00000373548 IGKV1OR2-108A0A075B7D4 117 aa15.74■□□□□ 0.11
HDAC1-201ENST00000373548 PRTN3P24158 256 aa15.74■□□□□ 0.11
HDAC1-201ENST00000373548 PRR20EP86478 221 aa15.74■□□□□ 0.11
HDAC1-201ENST00000373548 PRR20CP86479 221 aa15.74■□□□□ 0.11
HDAC1-201ENST00000373548 PRR20DP86480 221 aa15.74■□□□□ 0.11
HDAC1-201ENST00000373548 PRR20BP86481 221 aa15.74■□□□□ 0.11
HDAC1-201ENST00000373548 PRR20AP86496 221 aa15.74■□□□□ 0.11
HDAC1-201ENST00000373548 KLRD1Q13241 179 aa15.74■□□□□ 0.11
HDAC1-201ENST00000373548 TMEM249Q2WGJ8 235 aa15.74■□□□□ 0.11
HDAC1-201ENST00000373548 TPTE2P1Q5T6R2 138 aa15.74■□□□□ 0.11
HDAC1-201ENST00000373548 TVP23CQ96ET8 276 aa15.74■□□□□ 0.11
HDAC1-201ENST00000373548 MMD2Q8IY49 270 aa15.73■□□□□ 0.11
HDAC1-201ENST00000373548 SLC45A2Q9UMX9 530 aa15.73■□□□□ 0.11
HDAC1-201ENST00000373548 SIGLEC9Q9Y336 463 aa15.73■□□□□ 0.11
HDAC1-201ENST00000373548 LINC00869P0C866 280 aa15.73■□□□□ 0.11
HDAC1-201ENST00000373548 PAX6P26367 422 aa15.73■□□□□ 0.11
HDAC1-201ENST00000373548 ZFP36P26651 326 aaKnown RBP15.73■□□□□ 0.11
HDAC1-201ENST00000373548 HTR1DP28221 377 aa15.73■□□□□ 0.11
HDAC1-201ENST00000373548 TAGLN2P37802 199 aaKnown RBP15.73■□□□□ 0.11
HDAC1-201ENST00000373548 TUBA4BQ9H853 241 aa15.73■□□□□ 0.11
HDAC1-201ENST00000373548 SLC16A13Q7RTY0 426 aa15.72■□□□□ 0.11
HDAC1-201ENST00000373548 C15orf54Q8N8G6 183 aa15.72■□□□□ 0.11
HDAC1-201ENST00000373548 ABHD5Q8WTS1 349 aa15.72■□□□□ 0.11
HDAC1-201ENST00000373548 CACNG8Q8WXS5 425 aa15.72■□□□□ 0.11
HDAC1-201ENST00000373548 DPM3Q9P2X0 92 aa15.72■□□□□ 0.11
HDAC1-201ENST00000373548 TACC2O95359 2948 aa15.72■□□□□ 0.11
HDAC1-201ENST00000373548 AKAP6Q13023 2319 aa15.71■□□□□ 0.11
HDAC1-201ENST00000373548 ODF3BA8MYP8 253 aa15.71■□□□□ 0.11
HDAC1-201ENST00000373548 TIMM23O14925 209 aa15.71■□□□□ 0.11
HDAC1-201ENST00000373548 PAGE4O60829 102 aa15.71■□□□□ 0.11
HDAC1-201ENST00000373548 IGHV2-5P01817 119 aa15.71■□□□□ 0.11
HDAC1-201ENST00000373548 ISOC2Q96AB3 205 aa15.71■□□□□ 0.11
HDAC1-201ENST00000373548 METTL1Q9UBP6 276 aaKnown RBP15.71■□□□□ 0.11
HDAC1-201ENST00000373548 IGLC7A0M8Q6 106 aa15.71■□□□□ 0.11
HDAC1-201ENST00000373548 STAG3L2P0CL84 134 aa15.71■□□□□ 0.11
HDAC1-201ENST00000373548 STAG3L3P0CL85 134 aa15.71■□□□□ 0.11
HDAC1-201ENST00000373548 GPX4P36969 197 aaPredicted RBP15.71■□□□□ 0.11
HDAC1-201ENST00000373548 TNXAQ16473 311 aa15.71■□□□□ 0.11
HDAC1-201ENST00000373548 OVOL3O00110 214 aa15.7■□□□□ 0.1
HDAC1-201ENST00000373548 REG1AP05451 166 aa15.7■□□□□ 0.1
HDAC1-201ENST00000373548 ARL14EPLP0DKL9 152 aa15.7■□□□□ 0.1
HDAC1-201ENST00000373548 OR10J1P30954 320 aa15.7■□□□□ 0.1
HDAC1-201ENST00000373548 RPL27AP46776 148 aaKnown RBP15.7■□□□□ 0.1
HDAC1-201ENST00000373548 SUB1P53999 127 aaKnown RBP eCLIP15.7■□□□□ 0.14e-8■■■■□ 20.5
HDAC1-201ENST00000373548 C1orf122Q6ZSJ8 110 aa15.7■□□□□ 0.1
HDAC1-201ENST00000373548 LHFPL4Q7Z7J7 247 aa15.7■□□□□ 0.1
HDAC1-201ENST00000373548 RNASEH2CQ8TDP1 164 aaKnown RBP15.7■□□□□ 0.1
HDAC1-201ENST00000373548 FNDC4Q9H6D8 234 aaPredicted RBP15.7■□□□□ 0.1
HDAC1-201ENST00000373548 SEPSECSQ9HD40 501 aaKnown RBP15.7■□□□□ 0.1
HDAC1-201ENST00000373548 TMEM250H0YL14 139 aa15.7■□□□□ 0.1
HDAC1-201ENST00000373548 ACTL6BO94805 426 aa15.7■□□□□ 0.1
HDAC1-201ENST00000373548 VENTXO95231 258 aa15.7■□□□□ 0.1
HDAC1-201ENST00000373548 MAS1LP35410 378 aa15.7■□□□□ 0.1
HDAC1-201ENST00000373548 SPATA31B1PQ5VZV4 182 aa15.7■□□□□ 0.1
HDAC1-201ENST00000373548 PPP1R27Q86WC6 154 aa15.7■□□□□ 0.1
HDAC1-201ENST00000373548 KIR3DL3Q8N743 410 aa15.7■□□□□ 0.1
HDAC1-201ENST00000373548 OR4F5Q8NH21 305 aa15.7■□□□□ 0.1
HDAC1-201ENST00000373548 OR2T6Q8NHC8 308 aa15.7■□□□□ 0.1
HDAC1-201ENST00000373548 OR4F4Q96R69 305 aa15.7■□□□□ 0.1
HDAC1-201ENST00000373548 RNF5Q99942 180 aa15.7■□□□□ 0.1
HDAC1-201ENST00000373548 FBXL15Q9H469 300 aa15.7■□□□□ 0.1
HDAC1-201ENST00000373548 HILPDAQ9Y5L2 63 aa15.7■□□□□ 0.1
HDAC1-201ENST00000373548 COMPP49747 757 aaPredicted RBP15.69■□□□□ 0.1
HDAC1-201ENST00000373548 RHOBP62745 196 aa15.69■□□□□ 0.1
HDAC1-201ENST00000373548 CFHR4Q92496 578 aa15.69■□□□□ 0.1
HDAC1-201ENST00000373548 HIST1H2BAQ96A08 127 aa15.69■□□□□ 0.1
HDAC1-201ENST00000373548 SLC35E1Q96K37 410 aa15.69■□□□□ 0.1
HDAC1-201ENST00000373548 NDUFS6O75380 124 aaKnown RBP15.68■□□□□ 0.1
HDAC1-201ENST00000373548 CEACAM3P40198 252 aa15.68■□□□□ 0.1
HDAC1-201ENST00000373548 SPNS3Q6ZMD2 512 aa15.68■□□□□ 0.1
HDAC1-201ENST00000373548 VMO1Q7Z5L0 202 aa15.68■□□□□ 0.1
HDAC1-201ENST00000373548 IGFBPL1Q8WX77 278 aa15.68■□□□□ 0.1
HDAC1-201ENST00000373548 ACY3Q96HD9 319 aa15.68■□□□□ 0.1
HDAC1-201ENST00000373548 A0A087WWC5 75 aa15.68■□□□□ 0.1
HDAC1-201ENST00000373548 A0A1W2PRD5 423 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms