RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 RSPO4Q2I0M5 234 aaPredicted RBP9.69□□□□□ -0.86
VCL-202ENST00000372755 MUC21Q5SSG8 566 aa9.69□□□□□ -0.86
VCL-202ENST00000372755 LDLRAD2Q5SZI1 272 aa9.69□□□□□ -0.86
VCL-202ENST00000372755 IMMP2LQ96T52 175 aa9.69□□□□□ -0.86
VCL-202ENST00000372755 REPIN1Q9BWE0 567 aaKnown RBP9.69□□□□□ -0.86
VCL-202ENST00000372755 TYMSP04818 313 aa9.69□□□□□ -0.86
VCL-202ENST00000372755 IGHV1-2P23083 117 aa9.69□□□□□ -0.86
VCL-202ENST00000372755 TMEM144Q7Z5S9 345 aa9.69□□□□□ -0.86
VCL-202ENST00000372755 DMRTA2Q96SC8 542 aa9.69□□□□□ -0.86
VCL-202ENST00000372755 RTBDNQ9BSG5 229 aaPredicted RBP9.69□□□□□ -0.86
VCL-202ENST00000372755 RAMP1O60894 148 aa9.69□□□□□ -0.86
VCL-202ENST00000372755 CEACAM1P13688 526 aa9.69□□□□□ -0.86
VCL-202ENST00000372755 PSG7Q13046 419 aa9.69□□□□□ -0.86
VCL-202ENST00000372755 NIT1Q86X76 327 aa9.69□□□□□ -0.86
VCL-202ENST00000372755 A0A0G2JK05 382 aa9.68□□□□□ -0.86
VCL-202ENST00000372755 SAA1P0DJI8 122 aaPredicted RBP9.68□□□□□ -0.86
VCL-202ENST00000372755 IGHV3-11P01762 117 aa9.68□□□□□ -0.86
VCL-202ENST00000372755 CD7P09564 240 aa9.68□□□□□ -0.86
VCL-202ENST00000372755 ZNF525Q8N782 197 aa9.68□□□□□ -0.86
VCL-202ENST00000372755 F5P12259 2224 aa9.68□□□□□ -0.86
VCL-202ENST00000372755 DTX2Q86UW9 622 aa9.68□□□□□ -0.86
VCL-202ENST00000372755 RNASE6Q93091 150 aaKnown RBP9.68□□□□□ -0.86
VCL-202ENST00000372755 YPEL1O60688 119 aa9.68□□□□□ -0.86
VCL-202ENST00000372755 SRSF1Q07955 248 aaKnown RBP eCLIP9.68□□□□□ -0.862e-6■□□□□ 10.6
VCL-202ENST00000372755 ABHD17AQ96GS6 310 aa9.68□□□□□ -0.86
VCL-202ENST00000372755 YPEL2Q96QA6 119 aa9.68□□□□□ -0.86
VCL-202ENST00000372755 TRAV21A0A0B4J279 112 aa9.68□□□□□ -0.86
VCL-202ENST00000372755 SNAI2O43623 268 aa9.68□□□□□ -0.86
VCL-202ENST00000372755 IFITM2Q01629 132 aa9.68□□□□□ -0.86
VCL-202ENST00000372755 TMEM95Q3KNT9 176 aa9.68□□□□□ -0.86
VCL-202ENST00000372755 NXT2Q9NPJ8 142 aaKnown RBP9.68□□□□□ -0.86
VCL-202ENST00000372755 TRGV11A0A075B6L2 103 aa9.67□□□□□ -0.86
VCL-202ENST00000372755 MBD3L1Q8WWY6 194 aa9.67□□□□□ -0.86
VCL-202ENST00000372755 C5orf30Q96GV9 206 aa9.67□□□□□ -0.86
VCL-202ENST00000372755 PRDM13Q9H4Q3 707 aa9.67□□□□□ -0.86
VCL-202ENST00000372755 ZNF257Q9Y2Q1 563 aa9.67□□□□□ -0.86
VCL-202ENST00000372755 SAA2-SAA4A0A096LPE2 208 aa9.67□□□□□ -0.86
VCL-202ENST00000372755 HIGD1CA8MV81 97 aa9.67□□□□□ -0.86
VCL-202ENST00000372755 CRPP02741 224 aa9.67□□□□□ -0.86
VCL-202ENST00000372755 SAA2P0DJI9 122 aaPredicted RBP9.67□□□□□ -0.86
VCL-202ENST00000372755 PHLDA1Q8WV24 401 aaPredicted RBP9.67□□□□□ -0.86
VCL-202ENST00000372755 SHANK3Q9BYB0 1731 aa9.67□□□□□ -0.86
VCL-202ENST00000372755 COL18A1P39060 1754 aa9.67□□□□□ -0.86
VCL-202ENST00000372755 ZNF688P0C7X2 276 aa9.67□□□□□ -0.86
VCL-202ENST00000372755 RNF182Q8N6D2 247 aa9.67□□□□□ -0.86
VCL-202ENST00000372755 ZNF600Q6ZNG1 722 aa9.67□□□□□ -0.86
VCL-202ENST00000372755 LY75O60449 1722 aa9.67□□□□□ -0.86
VCL-202ENST00000372755 TRBV6-7A0A0A0MS04 114 aa9.66□□□□□ -0.86
VCL-202ENST00000372755 PGPEP1LA6NFU8 196 aa9.66□□□□□ -0.86
VCL-202ENST00000372755 C15orf61A6NNL5 157 aa9.66□□□□□ -0.86
VCL-202ENST00000372755 ZP1P60852 638 aa9.66□□□□□ -0.86
VCL-202ENST00000372755 OR2K2Q8NGT1 345 aa9.66□□□□□ -0.86
VCL-202ENST00000372755 TRAV14DV4A0A0A6YYC5 116 aa9.66□□□□□ -0.86
VCL-202ENST00000372755 LDLRAD4O15165 306 aa9.66□□□□□ -0.86
VCL-202ENST00000372755 CCL20P78556 96 aa9.66□□□□□ -0.86
VCL-202ENST00000372755 PAX2Q02962 417 aa9.66□□□□□ -0.86
VCL-202ENST00000372755 ST6GALNAC6Q969X2 333 aa9.66□□□□□ -0.86
VCL-202ENST00000372755 RNF125Q96EQ8 232 aa9.66□□□□□ -0.86
VCL-202ENST00000372755 SLC25A15Q9Y619 301 aa9.66□□□□□ -0.86
VCL-202ENST00000372755 LINC00271P0C7V0 271 aa9.66□□□□□ -0.86
VCL-202ENST00000372755 TMEM133Q9H2Q1 129 aa9.66□□□□□ -0.86
VCL-202ENST00000372755 IGHV3OR16-8A0A075B7F1 116 aa9.66□□□□□ -0.86
VCL-202ENST00000372755 IGKV1D-43A0A0B4J1Z2 117 aa9.66□□□□□ -0.86
VCL-202ENST00000372755 C18orf12Q96KH6 178 aa9.66□□□□□ -0.86
VCL-202ENST00000372755 CYSLTR1Q9Y271 337 aa9.66□□□□□ -0.86
VCL-202ENST00000372755 LAMB2P55268 1798 aa9.66□□□□□ -0.86
VCL-202ENST00000372755 CA1P00915 261 aaPredicted RBP9.66□□□□□ -0.86
VCL-202ENST00000372755 ORMDL2Q53FV1 153 aa9.66□□□□□ -0.86
VCL-202ENST00000372755 PPBPP02775 128 aa9.65□□□□□ -0.86
VCL-202ENST00000372755 PCP4P48539 62 aa9.65□□□□□ -0.86
VCL-202ENST00000372755 MYO7AQ13402 2215 aa9.65□□□□□ -0.86
VCL-202ENST00000372755 FOCADQ5VW36 1801 aa9.65□□□□□ -0.86
VCL-202ENST00000372755 TRGV4A0A0C4DH28 118 aa9.65□□□□□ -0.86
VCL-202ENST00000372755 PLPPR1Q8TBJ4 325 aa9.65□□□□□ -0.86
VCL-202ENST00000372755 VGLL1Q99990 258 aa9.65□□□□□ -0.86
VCL-202ENST00000372755 HBDP02042 147 aa9.65□□□□□ -0.86
VCL-202ENST00000372755 GATA2P23769 480 aaPredicted RBP9.65□□□□□ -0.86
VCL-202ENST00000372755 TCRBV4S1A1TA0A5B7 111 aa9.65□□□□□ -0.86
VCL-202ENST00000372755 LINC00614P0C842 121 aa9.65□□□□□ -0.86
VCL-202ENST00000372755 CDKN1AP38936 164 aa9.65□□□□□ -0.86
VCL-202ENST00000372755 C9orf106Q8NAJ2 232 aa9.65□□□□□ -0.86
VCL-202ENST00000372755 TMEM190Q8WZ59 177 aa9.65□□□□□ -0.86
VCL-202ENST00000372755 EPDR1Q9UM22 224 aa9.65□□□□□ -0.86
VCL-202ENST00000372755 SCN3AQ9NY46 2000 aa9.65□□□□□ -0.86
VCL-202ENST00000372755 DPM2O94777 84 aa9.65□□□□□ -0.87
VCL-202ENST00000372755 CMC4P56277 68 aaPredicted RBP9.65□□□□□ -0.87
VCL-202ENST00000372755 BRWD1Q9NSI6 2320 aa9.65□□□□□ -0.87
VCL-202ENST00000372755 LINC01549A6NIU2 74 aa9.64□□□□□ -0.87
VCL-202ENST00000372755 SLC25A2Q9BXI2 301 aa9.64□□□□□ -0.87
VCL-202ENST00000372755 TRIP11Q15643 1979 aa9.64□□□□□ -0.87
VCL-202ENST00000372755 A0A0G2JMM0 328 aa9.64□□□□□ -0.87
VCL-202ENST00000372755 A0A1W2PPB8 328 aa9.64□□□□□ -0.87
VCL-202ENST00000372755 A0A1W2PRS3 328 aa9.64□□□□□ -0.87
VCL-202ENST00000372755 FAM90A9PA6NNJ1 464 aa9.64□□□□□ -0.87
VCL-202ENST00000372755 KIR3DP1A8MWS1 328 aa9.64□□□□□ -0.87
VCL-202ENST00000372755 OVOL1O14753 267 aa9.64□□□□□ -0.87
VCL-202ENST00000372755 RPL23P62829 140 aaKnown RBP9.64□□□□□ -0.87
VCL-202ENST00000372755 TRAV8-2A0A0B4J237 113 aa9.64□□□□□ -0.87
VCL-202ENST00000372755 THBDP07204 575 aa9.64□□□□□ -0.87
VCL-202ENST00000372755 GNG5P63218 68 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms