RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 APOA2P02652 100 aa9.58□□□□□ -0.88
PDE6C-201ENST00000371447 C1QTNF9P0C862 333 aa9.58□□□□□ -0.88
PDE6C-201ENST00000371447 OR10J1P30954 320 aa9.58□□□□□ -0.88
PDE6C-201ENST00000371447 RPL23P62829 140 aaKnown RBP9.58□□□□□ -0.88
PDE6C-201ENST00000371447 TEPPQ6URK8 271 aa9.58□□□□□ -0.88
PDE6C-201ENST00000371447 MIR17HGQ75NE6 70 aa9.58□□□□□ -0.88
PDE6C-201ENST00000371447 TMEM37Q8WXS4 190 aa9.58□□□□□ -0.88
PDE6C-201ENST00000371447 FLYWCH2Q96CP2 140 aaKnown RBP9.58□□□□□ -0.88
PDE6C-201ENST00000371447 NEIL1Q96FI4 390 aaPredicted RBP9.58□□□□□ -0.88
PDE6C-201ENST00000371447 SMDT1Q9H4I9 107 aa9.58□□□□□ -0.88
PDE6C-201ENST00000371447 NPVFQ9HCQ7 196 aa9.58□□□□□ -0.88
PDE6C-201ENST00000371447 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.58□□□□□ -0.88
PDE6C-201ENST00000371447 SCO2A0A1W2PP80 73 aa9.57□□□□□ -0.88
PDE6C-201ENST00000371447 C5orf52A6NGY3 159 aa9.57□□□□□ -0.88
PDE6C-201ENST00000371447 SHISA9B4DS77 424 aa9.57□□□□□ -0.88
PDE6C-201ENST00000371447 AP4M1O00189 453 aa9.57□□□□□ -0.88
PDE6C-201ENST00000371447 KBTBD11O94819 623 aa9.57□□□□□ -0.88
PDE6C-201ENST00000371447 TCTEX1D1Q8N7M0 179 aa9.57□□□□□ -0.88
PDE6C-201ENST00000371447 ZNF114Q8NC26 417 aa9.57□□□□□ -0.88
PDE6C-201ENST00000371447 FRZBQ92765 325 aa9.57□□□□□ -0.88
PDE6C-201ENST00000371447 UHRF2Q96PU4 802 aa9.57□□□□□ -0.88
PDE6C-201ENST00000371447 OR5B12Q96R08 314 aa9.57□□□□□ -0.88
PDE6C-201ENST00000371447 GPR61Q9BZJ8 451 aa9.57□□□□□ -0.88
PDE6C-201ENST00000371447 ELOVL5Q9NYP7 299 aa9.57□□□□□ -0.88
PDE6C-201ENST00000371447 FAM208BQ5VWN6 2430 aa9.57□□□□□ -0.88
PDE6C-201ENST00000371447 TEX50A0A1B0GTY4 177 aa9.57□□□□□ -0.88
PDE6C-201ENST00000371447 CNTFRP26992 372 aa9.57□□□□□ -0.88
PDE6C-201ENST00000371447 PSG5Q15238 335 aa9.57□□□□□ -0.88
PDE6C-201ENST00000371447 SLC25A48Q6ZT89 311 aaKnown RBP9.57□□□□□ -0.88
PDE6C-201ENST00000371447 NUP37Q8NFH4 326 aa9.57□□□□□ -0.88
PDE6C-201ENST00000371447 FAM222BQ8WU58 562 aa9.57□□□□□ -0.88
PDE6C-201ENST00000371447 SGK494Q96LW2 274 aa9.57□□□□□ -0.88
PDE6C-201ENST00000371447 NGBQ9NPG2 151 aa9.57□□□□□ -0.88
PDE6C-201ENST00000371447 SIRT7Q9NRC8 400 aa9.57□□□□□ -0.88
PDE6C-201ENST00000371447 NAT8Q9UHE5 227 aa9.57□□□□□ -0.88
PDE6C-201ENST00000371447 LINC00312Q9Y6C7 94 aa9.57□□□□□ -0.88
PDE6C-201ENST00000371447 OPRK1P41145 380 aa9.57□□□□□ -0.88
PDE6C-201ENST00000371447 GALR1P47211 349 aa9.57□□□□□ -0.88
PDE6C-201ENST00000371447 PRSS8Q16651 343 aa9.57□□□□□ -0.88
PDE6C-201ENST00000371447 MUC15Q8N387 334 aa9.57□□□□□ -0.88
PDE6C-201ENST00000371447 TOLLIPQ9H0E2 274 aa9.57□□□□□ -0.88
PDE6C-201ENST00000371447 H3BTX0 84 aa9.56□□□□□ -0.88
PDE6C-201ENST00000371447 TRGC1P0CF51 173 aa9.56□□□□□ -0.88
PDE6C-201ENST00000371447 SSBP2P81877 361 aaPredicted RBP9.56□□□□□ -0.88
PDE6C-201ENST00000371447 ZNF439Q8NDP4 499 aa9.56□□□□□ -0.88
PDE6C-201ENST00000371447 PARD6GQ9BYG4 376 aaPredicted RBP9.56□□□□□ -0.88
PDE6C-201ENST00000371447 TUBA4BQ9H853 241 aa9.56□□□□□ -0.88
PDE6C-201ENST00000371447 RAB9BQ9NP90 201 aa9.56□□□□□ -0.88
PDE6C-201ENST00000371447 ONECUT1Q9UBC0 465 aa9.56□□□□□ -0.88
PDE6C-201ENST00000371447 HRNRQ86YZ3 2850 aaPredicted RBP9.56□□□□□ -0.88
PDE6C-201ENST00000371447 TRAV5A0A0B4J249 113 aa9.56□□□□□ -0.88
PDE6C-201ENST00000371447 HIST1H2BKO60814 126 aa9.56□□□□□ -0.88
PDE6C-201ENST00000371447 HIST1H2BJP06899 126 aa9.56□□□□□ -0.88
PDE6C-201ENST00000371447 HIST1H2BOP23527 126 aa9.56□□□□□ -0.88
PDE6C-201ENST00000371447 HIST1H2BBP33778 126 aa9.56□□□□□ -0.88
PDE6C-201ENST00000371447 HIST1H2BDP58876 126 aa9.56□□□□□ -0.88
PDE6C-201ENST00000371447 TAS2R60P59551 318 aa9.56□□□□□ -0.88
PDE6C-201ENST00000371447 HIST1H2BCP62807 126 aa9.56□□□□□ -0.88
PDE6C-201ENST00000371447 RAB31Q13636 194 aa9.56□□□□□ -0.88
PDE6C-201ENST00000371447 EFNB3Q15768 340 aa9.56□□□□□ -0.88
PDE6C-201ENST00000371447 HIST2H2BEQ16778 126 aa9.56□□□□□ -0.88
PDE6C-201ENST00000371447 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.56□□□□□ -0.88
PDE6C-201ENST00000371447 PRR31Q5SQ13 230 aa9.56□□□□□ -0.88
PDE6C-201ENST00000371447 Q8N7P7 452 aa9.56□□□□□ -0.88
PDE6C-201ENST00000371447 HIST1H2BHQ93079 126 aa9.56□□□□□ -0.88
PDE6C-201ENST00000371447 MISP3Q96FF7 219 aa9.56□□□□□ -0.88
PDE6C-201ENST00000371447 HIST1H2BNQ99877 126 aa9.56□□□□□ -0.88
PDE6C-201ENST00000371447 HIST1H2BMQ99879 126 aa9.56□□□□□ -0.88
PDE6C-201ENST00000371447 RPH3ALQ9UNE2 315 aa9.56□□□□□ -0.88
PDE6C-201ENST00000371447 TIMM9Q9Y5J7 89 aa9.56□□□□□ -0.88
PDE6C-201ENST00000371447 PKD1L2Q7Z442 2459 aa9.56□□□□□ -0.88
PDE6C-201ENST00000371447 MYO18BQ8IUG5 2567 aa9.56□□□□□ -0.88
PDE6C-201ENST00000371447 SLC35B1P78383 322 aa9.56□□□□□ -0.88
PDE6C-201ENST00000371447 SP5Q6BEB4 398 aaPredicted RBP9.56□□□□□ -0.88
PDE6C-201ENST00000371447 NHLRC2Q8NBF2 726 aa9.56□□□□□ -0.88
PDE6C-201ENST00000371447 OR10D4PQ8NGN7 298 aa9.56□□□□□ -0.88
PDE6C-201ENST00000371447 TMEM14BQ9NUH8 114 aa9.56□□□□□ -0.88
PDE6C-201ENST00000371447 IGKV1OR2-108A0A075B7D4 117 aa9.55□□□□□ -0.88
PDE6C-201ENST00000371447 UPK2O00526 184 aa9.55□□□□□ -0.88
PDE6C-201ENST00000371447 TOX4O94842 621 aa9.55□□□□□ -0.88
PDE6C-201ENST00000371447 FABP4P15090 132 aa9.55□□□□□ -0.88
PDE6C-201ENST00000371447 KIR2DS2P43631 304 aa9.55□□□□□ -0.88
PDE6C-201ENST00000371447 RPL8P62917 257 aaKnown RBP9.55□□□□□ -0.88
PDE6C-201ENST00000371447 PLGLAQ15195 96 aa9.55□□□□□ -0.88
PDE6C-201ENST00000371447 C1orf159Q96HA4 380 aa9.55□□□□□ -0.88
PDE6C-201ENST00000371447 GSX1Q9H4S2 264 aaPredicted RBP9.55□□□□□ -0.88
PDE6C-201ENST00000371447 YTHDF2Q9Y5A9 579 aaKnown RBP9.55□□□□□ -0.88
PDE6C-201ENST00000371447 HILPDAQ9Y5L2 63 aa9.55□□□□□ -0.88
PDE6C-201ENST00000371447 S4R3C0 116 aa9.55□□□□□ -0.88
PDE6C-201ENST00000371447 RBFOX2O43251 390 aaKnown RBP eCLIP9.55□□□□□ -0.88
PDE6C-201ENST00000371447 LOXP28300 417 aaPredicted RBP9.55□□□□□ -0.88
PDE6C-201ENST00000371447 CDPF1Q6NVV7 123 aa9.55□□□□□ -0.88
PDE6C-201ENST00000371447 PRNDQ9UKY0 176 aa9.55□□□□□ -0.88
PDE6C-201ENST00000371447 SLC17A3O00476 420 aa9.54□□□□□ -0.88
PDE6C-201ENST00000371447 OR5G3P0C626 314 aa9.54□□□□□ -0.88
PDE6C-201ENST00000371447 SMIM6P0DI80 62 aa9.54□□□□□ -0.88
PDE6C-201ENST00000371447 FOLR2P14207 255 aa9.54□□□□□ -0.88
PDE6C-201ENST00000371447 S100A2P29034 98 aa9.54□□□□□ -0.88
PDE6C-201ENST00000371447 ARF6P62330 175 aa9.54□□□□□ -0.88
PDE6C-201ENST00000371447 OR5I1Q13606 314 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms