RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 ATG12O94817 140 aa12.52□□□□□ -0.41
PFDN4-201ENST00000371419 ZNF329Q86UD4 541 aa12.52□□□□□ -0.41
PFDN4-201ENST00000371419 DMBX1Q8NFW5 382 aa12.52□□□□□ -0.41
PFDN4-201ENST00000371419 OR4A5Q8NH83 315 aa12.52□□□□□ -0.41
PFDN4-201ENST00000371419 ZNF430Q9H8G1 570 aaPredicted RBP12.52□□□□□ -0.41
PFDN4-201ENST00000371419 BET1LQ9NYM9 111 aa12.52□□□□□ -0.41
PFDN4-201ENST00000371419 FBXO7Q9Y3I1 522 aa12.52□□□□□ -0.41
PFDN4-201ENST00000371419 WSB1Q9Y6I7 421 aa12.52□□□□□ -0.41
PFDN4-201ENST00000371419 TRAV41A0A0B4J266 112 aa12.51□□□□□ -0.41
PFDN4-201ENST00000371419 A0A1B0GU03 582 aa12.51□□□□□ -0.41
PFDN4-201ENST00000371419 MSGN1A6NI15 193 aa12.51□□□□□ -0.41
PFDN4-201ENST00000371419 MARCH11A6NNE9 402 aa12.51□□□□□ -0.41
PFDN4-201ENST00000371419 KRASP01116 189 aa12.51□□□□□ -0.41
PFDN4-201ENST00000371419 CD28P10747 220 aa12.51□□□□□ -0.41
PFDN4-201ENST00000371419 EGR2P11161 476 aaPredicted RBP12.51□□□□□ -0.41
PFDN4-201ENST00000371419 CRIP2P52943 208 aaPredicted RBP12.51□□□□□ -0.41
PFDN4-201ENST00000371419 SSBP2P81877 361 aaPredicted RBP12.51□□□□□ -0.41
PFDN4-201ENST00000371419 TMEM267Q0VDI3 215 aaPredicted RBP12.51□□□□□ -0.41
PFDN4-201ENST00000371419 TNXAQ16473 311 aa12.51□□□□□ -0.41
PFDN4-201ENST00000371419 C10orf99Q6UWK7 81 aa12.51□□□□□ -0.41
PFDN4-201ENST00000371419 OR4X2Q8NGF9 303 aa12.51□□□□□ -0.41
PFDN4-201ENST00000371419 SGMS2Q8NHU3 365 aa12.51□□□□□ -0.41
PFDN4-201ENST00000371419 RNASE11Q8TAA1 199 aaKnown RBP12.51□□□□□ -0.41
PFDN4-201ENST00000371419 LRRC20Q8TCA0 184 aa12.51□□□□□ -0.41
PFDN4-201ENST00000371419 FAM103A1Q9BTL3 118 aaKnown RBP12.51□□□□□ -0.41
PFDN4-201ENST00000371419 TMEM140Q9NV12 185 aa12.51□□□□□ -0.41
PFDN4-201ENST00000371419 G3V318 75 aa12.5□□□□□ -0.41
PFDN4-201ENST00000371419 CFHR3Q02985 330 aa12.5□□□□□ -0.41
PFDN4-201ENST00000371419 ECSCRQ19T08 205 aa12.5□□□□□ -0.41
PFDN4-201ENST00000371419 EIF5AL1Q6IS14 154 aaKnown RBP12.5□□□□□ -0.41
PFDN4-201ENST00000371419 TEX38Q6PEX7 206 aa12.5□□□□□ -0.41
PFDN4-201ENST00000371419 BAP18Q8IXM2 172 aa12.5□□□□□ -0.41
PFDN4-201ENST00000371419 COMMD1Q8N668 190 aa12.5□□□□□ -0.41
PFDN4-201ENST00000371419 CYTL1Q9NRR1 136 aa12.5□□□□□ -0.41
PFDN4-201ENST00000371419 MED9Q9NWA0 146 aa12.5□□□□□ -0.41
PFDN4-201ENST00000371419 RCL1Q9Y2P8 373 aaKnown RBP12.5□□□□□ -0.41
PFDN4-201ENST00000371419 IL6RP08887 468 aaPredicted RBP12.49□□□□□ -0.41
PFDN4-201ENST00000371419 NMBP08949 121 aa12.49□□□□□ -0.41
PFDN4-201ENST00000371419 PPIFP30405 207 aaKnown RBP12.49□□□□□ -0.41
PFDN4-201ENST00000371419 MAS1LP35410 378 aa12.49□□□□□ -0.41
PFDN4-201ENST00000371419 G6PCP35575 357 aa12.49□□□□□ -0.41
PFDN4-201ENST00000371419 RPL8P62917 257 aaKnown RBP12.49□□□□□ -0.41
PFDN4-201ENST00000371419 ID3Q02535 119 aa12.49□□□□□ -0.41
PFDN4-201ENST00000371419 AKIRIN2Q53H80 203 aa12.49□□□□□ -0.41
PFDN4-201ENST00000371419 LFNGQ8NES3 379 aa12.49□□□□□ -0.41
PFDN4-201ENST00000371419 CITED2Q99967 270 aaPredicted RBP12.49□□□□□ -0.41
PFDN4-201ENST00000371419 UPK2O00526 184 aa12.48□□□□□ -0.41
PFDN4-201ENST00000371419 JTBO76095 146 aa12.48□□□□□ -0.41
PFDN4-201ENST00000371419 IGKV1-39P01597 117 aa12.48□□□□□ -0.41
PFDN4-201ENST00000371419 IGHG4P01861 327 aa12.48□□□□□ -0.41
PFDN4-201ENST00000371419 IGKV1D-39P04432 117 aa12.48□□□□□ -0.41
PFDN4-201ENST00000371419 AKR1C2P52895 323 aa12.48□□□□□ -0.41
PFDN4-201ENST00000371419 VAMP2P63027 116 aa12.48□□□□□ -0.41
PFDN4-201ENST00000371419 C19orf54Q5BKX5 351 aa12.48□□□□□ -0.41
PFDN4-201ENST00000371419 TCTEX1D4Q5JR98 221 aa12.48□□□□□ -0.41
PFDN4-201ENST00000371419 UNQ5815/PRO19632Q6UWF5 114 aa12.48□□□□□ -0.41
PFDN4-201ENST00000371419 FAM219AQ8IW50 185 aa12.48□□□□□ -0.41
PFDN4-201ENST00000371419 SRSF12Q8WXF0 261 aaKnown RBP12.48□□□□□ -0.41
PFDN4-201ENST00000371419 GPR146Q96CH1 333 aa12.48□□□□□ -0.41
PFDN4-201ENST00000371419 SLC25A31Q9H0C2 315 aa12.48□□□□□ -0.41
PFDN4-201ENST00000371419 TRAV3A0A0B4J244 114 aa12.47□□□□□ -0.41
PFDN4-201ENST00000371419 TCRBV4S1A1TA0A5B7 111 aa12.47□□□□□ -0.41
PFDN4-201ENST00000371419 ANKRD34BA5PLL1 514 aa12.47□□□□□ -0.41
PFDN4-201ENST00000371419 WRBO00258 174 aa12.47□□□□□ -0.41
PFDN4-201ENST00000371419 PITX3O75364 302 aa12.47□□□□□ -0.41
PFDN4-201ENST00000371419 OPN1MWP04001 364 aa12.47□□□□□ -0.41
PFDN4-201ENST00000371419 ELANEP08246 267 aa12.47□□□□□ -0.41
PFDN4-201ENST00000371419 FGF2P09038 288 aa12.47□□□□□ -0.41
PFDN4-201ENST00000371419 OPN1MW2P0DN77 364 aa12.47□□□□□ -0.41
PFDN4-201ENST00000371419 OPN1MW3P0DN78 364 aa12.47□□□□□ -0.41
PFDN4-201ENST00000371419 FOXE3Q13461 319 aa12.47□□□□□ -0.41
PFDN4-201ENST00000371419 HIST2H2BDQ6DRA6 164 aa12.47□□□□□ -0.41
PFDN4-201ENST00000371419 TMEM68Q96MH6 324 aa12.47□□□□□ -0.41
PFDN4-201ENST00000371419 CITED4Q96RK1 184 aa12.47□□□□□ -0.41
PFDN4-201ENST00000371419 C11orf1Q9H5F2 150 aa12.47□□□□□ -0.41
PFDN4-201ENST00000371419 PFDN2Q9UHV9 154 aa12.47□□□□□ -0.41
PFDN4-201ENST00000371419 FOXA2Q9Y261 457 aaPredicted RBP12.47□□□□□ -0.41
PFDN4-201ENST00000371419 A0A1W2PN81 502 aa12.46□□□□□ -0.41
PFDN4-201ENST00000371419 CHRNA7P36544 502 aa12.46□□□□□ -0.41
PFDN4-201ENST00000371419 RPL27AP46776 148 aaKnown RBP12.46□□□□□ -0.41
PFDN4-201ENST00000371419 CXorf66Q5JRM2 361 aaPredicted RBP12.46□□□□□ -0.41
PFDN4-201ENST00000371419 C10orf55Q5SWW7 151 aa12.46□□□□□ -0.41
PFDN4-201ENST00000371419 H2BFWTQ7Z2G1 175 aa12.46□□□□□ -0.41
PFDN4-201ENST00000371419 COMMD7Q86VX2 200 aa12.46□□□□□ -0.41
PFDN4-201ENST00000371419 OR2C3Q8N628 320 aa12.46□□□□□ -0.41
PFDN4-201ENST00000371419 COA4Q9NYJ1 87 aa12.46□□□□□ -0.41
PFDN4-201ENST00000371419 TSSC4Q9Y5U2 329 aaPredicted RBP12.46□□□□□ -0.41
PFDN4-201ENST00000371419 TET2Q6N021 2002 aaPredicted RBP12.46□□□□□ -0.42
PFDN4-201ENST00000371419 BORCS7-ASMTA0A0B4J1R7 106 aa12.46□□□□□ -0.42
PFDN4-201ENST00000371419 FAM90A26D6RGX4 464 aa12.46□□□□□ -0.42
PFDN4-201ENST00000371419 IGLV1-40P01703 118 aa12.46□□□□□ -0.42
PFDN4-201ENST00000371419 PSMB8P28062 276 aa12.46□□□□□ -0.42
PFDN4-201ENST00000371419 POLR2GP62487 172 aaKnown RBP eCLIP12.46□□□□□ -0.42
PFDN4-201ENST00000371419 NDUFA11Q86Y39 141 aa12.46□□□□□ -0.42
PFDN4-201ENST00000371419 RNF152Q8N8N0 203 aa12.46□□□□□ -0.42
PFDN4-201ENST00000371419 RAB40CQ96S21 281 aa12.46□□□□□ -0.42
PFDN4-201ENST00000371419 COMMD5Q9GZQ3 224 aa12.46□□□□□ -0.42
PFDN4-201ENST00000371419 FBXL17Q9UF56 701 aa12.46□□□□□ -0.42
PFDN4-201ENST00000371419 A0A0G2JRQ6 117 aa12.45□□□□□ -0.42
PFDN4-201ENST00000371419 M0QZ24 198 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms