RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 NMES1Q9C002 83 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 OR2J1Q9GZK6 312 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 CCDC90BQ9GZT6 254 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 TMEM222Q9H0R3 208 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 RNASE7Q9H1E1 156 aaKnown RBP3.08□□□□□ -1.92
MCF2-203ENST00000370576 SH3BGRL3Q9H299 93 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 SERTAD4Q9NUC0 356 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 TMEM100Q9NV29 134 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 C11orf21Q9P2W6 132 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 INSIG2Q9Y5U4 225 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 OTOGLQ3ZCN5 2332 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 PRR14LQ5THK1 2151 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 ANK2Q01484 3957 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 TRAV14DV4A0A0A6YYC5 116 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 A0A1B0GXF2 115 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 TCF21O43680 179 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 NRASP01111 189 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 SNRPCP09234 159 aaKnown RBP3.08□□□□□ -1.92
MCF2-203ENST00000370576 SLC2A2P11168 524 aaPredicted RBP3.08□□□□□ -1.92
MCF2-203ENST00000370576 ZNF823P16415 610 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 BCL3P20749 454 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 CHRNB4P30926 498 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 CAV3P56539 151 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 TAS2R19P59542 299 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 PPP1CBP62140 327 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 OPCMLQ14982 345 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 C1orf195Q5TG92 126 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 SLC35E4Q6ICL7 350 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 LINC00311Q8N616 119 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 TCTEX1D1Q8N7M0 179 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 LY6G5BQ8NDX9 201 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 MRPL30Q8TCC3 161 aaKnown RBP3.08□□□□□ -1.92
MCF2-203ENST00000370576 DDB2Q92466 427 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 S100A16Q96FQ6 103 aaKnown RBP3.08□□□□□ -1.92
MCF2-203ENST00000370576 C20orf85Q9H1P6 137 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 SPTBP11277 2137 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 CRYM-AS1A6NIL9 109 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 E5RGE8 158 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 C8orf87E5RJ46 101 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 H0YIZ8 118 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 REG1AP05451 166 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 CTSDP07339 412 aaPredicted RBP3.07□□□□□ -1.92
MCF2-203ENST00000370576 USF1P22415 310 aaPredicted RBP3.07□□□□□ -1.92
MCF2-203ENST00000370576 NR4A1P22736 598 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 BRS3P32247 399 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 GALR1P47211 349 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 SUMO2P61956 95 aaKnown RBP3.07□□□□□ -1.92
MCF2-203ENST00000370576 MEF2CQ06413 473 aaPredicted RBP3.07□□□□□ -1.92
MCF2-203ENST00000370576 PPP1R1AQ13522 171 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 OR5I1Q13606 314 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 TAF9Q16594 264 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 PIK3CD-AS1Q5SR53 167 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 ATP1A1-AS1Q5TC04 95 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 PLET1Q6UQ28 207 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 FAM231DQ6ZW35 169 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 TCF23Q7RTU1 214 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 VKORC1L1Q8N0U8 176 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 OR8G5Q8NG78 346 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 OR51E1Q8TCB6 317 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 TMED6Q8WW62 240 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 RDH5Q92781 318 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 CARD19Q96LW7 228 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 EMC6Q9BV81 110 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 TM2D2Q9BX73 214 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 ZNF580Q9UK33 172 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 NSG2Q9Y328 171 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 ZDBF2Q9HCK1 2354 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 ESPL1Q14674 2120 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 IGKV1-6A0A0C4DH72 117 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.07□□□□□ -1.92
MCF2-203ENST00000370576 TMEM189A5PLL7 270 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 IFITM10A6NMD0 228 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 SRRM5B3KS81 715 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 C11orf98E9PRG8 122 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 LINC01619G3V211 115 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 J3QT63 122 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 P0DMU3 169 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 FAM231AP0DMU4 169 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 FAM231CP0DMU5 169 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 SFTPDP35247 375 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 GLRXP35754 106 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 ZNF616Q08AN1 781 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 HERPUD1Q15011 391 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 RBMS2Q15434 407 aaKnown RBP3.07□□□□□ -1.92
MCF2-203ENST00000370576 CLEC12BQ2HXU8 276 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 PYY3Q5JQD4 70 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 PAPPA-AS1Q5QFB9 102 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 NCMAPQ5T1S8 102 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 ATAD3CQ5T2N8 411 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 RSBN1Q5VWQ0 802 aaPredicted RBP3.07□□□□□ -1.92
MCF2-203ENST00000370576 Q6ZRU5 148 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 MOB1BQ7L9L4 216 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 OR4C16Q8NGL9 310 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 URM1Q9BTM9 101 aaKnown RBP3.07□□□□□ -1.92
MCF2-203ENST00000370576 KCNJ16Q9NPI9 418 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 THYN1Q9P016 225 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 VSIG4Q9Y279 399 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 A0A1B0GW55 424 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 A0A1B0GW64 132 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 A8MXK9 166 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms