RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 BET1LQ9NYM9 111 aa11.2□□□□□ -0.62
SSR4-204ENST00000370087 COMMD3Q9UBI1 195 aa11.2□□□□□ -0.62
SSR4-204ENST00000370087 IGKV3-7A0A075B6H7 116 aa11.19□□□□□ -0.62
SSR4-204ENST00000370087 IGHV3-49A0A0A0MS15 119 aa11.19□□□□□ -0.62
SSR4-204ENST00000370087 NDUFA4O00483 81 aa11.19□□□□□ -0.62
SSR4-204ENST00000370087 TNFSF12O43508 249 aa11.19□□□□□ -0.62
SSR4-204ENST00000370087 RBMY1A1P0DJD3 496 aaKnown RBP11.19□□□□□ -0.62
SSR4-204ENST00000370087 RBMY1CP0DJD4 496 aa11.19□□□□□ -0.62
SSR4-204ENST00000370087 DTYMKP23919 212 aa11.19□□□□□ -0.62
SSR4-204ENST00000370087 RBMY1FQ15415 496 aaKnown RBP11.19□□□□□ -0.62
SSR4-204ENST00000370087 HACD4Q5VWC8 232 aa11.19□□□□□ -0.62
SSR4-204ENST00000370087 OR4A5Q8NH83 315 aa11.19□□□□□ -0.62
SSR4-204ENST00000370087 VN1R17PQ8TDU5 208 aa11.19□□□□□ -0.62
SSR4-204ENST00000370087 C6orf62Q9GZU0 229 aaPredicted RBP11.19□□□□□ -0.62
SSR4-204ENST00000370087 HRASLSQ9HDD0 168 aa11.19□□□□□ -0.62
SSR4-204ENST00000370087 IGHV4-4A0A075B6R2 117 aa11.18□□□□□ -0.62
SSR4-204ENST00000370087 TRAV18A0A075B6X5 111 aa11.18□□□□□ -0.62
SSR4-204ENST00000370087 HRASP01112 189 aa11.18□□□□□ -0.62
SSR4-204ENST00000370087 APOA1P02647 267 aa11.18□□□□□ -0.62
SSR4-204ENST00000370087 WT1-ASQ06250 92 aa11.18□□□□□ -0.62
SSR4-204ENST00000370087 TMEM69Q5SWH9 247 aa11.18□□□□□ -0.62
SSR4-204ENST00000370087 Q6ZTC4 211 aa11.18□□□□□ -0.62
SSR4-204ENST00000370087 ZNF575Q86XF7 245 aa11.18□□□□□ -0.62
SSR4-204ENST00000370087 SLC25A38Q96DW6 304 aa11.18□□□□□ -0.62
SSR4-204ENST00000370087 BSCL2Q96G97 398 aaPredicted RBP11.18□□□□□ -0.62
SSR4-204ENST00000370087 SMPXQ9UHP9 88 aa11.18□□□□□ -0.62
SSR4-204ENST00000370087 LRP1BQ9NZR2 4599 aa11.17□□□□□ -0.62
SSR4-204ENST00000370087 H3BMQ9 156 aa11.17□□□□□ -0.62
SSR4-204ENST00000370087 K7EMT4 169 aa11.17□□□□□ -0.62
SSR4-204ENST00000370087 ZNF701M0R085 212 aaPredicted RBP11.17□□□□□ -0.62
SSR4-204ENST00000370087 UPK2O00526 184 aa11.17□□□□□ -0.62
SSR4-204ENST00000370087 CHEK1O14757 476 aa11.17□□□□□ -0.62
SSR4-204ENST00000370087 GBGT1Q8N5D6 347 aa11.17□□□□□ -0.62
SSR4-204ENST00000370087 GDPD1Q8N9F7 314 aa11.17□□□□□ -0.62
SSR4-204ENST00000370087 NUDCD2Q8WVJ2 157 aa11.17□□□□□ -0.62
SSR4-204ENST00000370087 CCDC59Q9P031 241 aaKnown RBP11.17□□□□□ -0.62
SSR4-204ENST00000370087 NDUFA13Q9P0J0 144 aa11.17□□□□□ -0.62
SSR4-204ENST00000370087 IGHV4-28A0A0C4DH34 117 aa11.16□□□□□ -0.62
SSR4-204ENST00000370087 IGHV7-4-1A0A0J9YVY3 117 aa11.16□□□□□ -0.62
SSR4-204ENST00000370087 TMEM235A6NFC5 223 aa11.16□□□□□ -0.62
SSR4-204ENST00000370087 FAM25AB3EWG3 89 aa11.16□□□□□ -0.62
SSR4-204ENST00000370087 FAM25CB3EWG5 89 aa11.16□□□□□ -0.62
SSR4-204ENST00000370087 FAM25GB3EWG6 89 aa11.16□□□□□ -0.62
SSR4-204ENST00000370087 C11orf94C9JXX5 98 aa11.16□□□□□ -0.62
SSR4-204ENST00000370087 M0R2N4 97 aa11.16□□□□□ -0.62
SSR4-204ENST00000370087 RGS5O15539 181 aa11.16□□□□□ -0.62
SSR4-204ENST00000370087 SLC22A5O76082 557 aa11.16□□□□□ -0.62
SSR4-204ENST00000370087 GIG44P09565 113 aaPredicted RBP11.16□□□□□ -0.62
SSR4-204ENST00000370087 HLA-DMBP28068 263 aa11.16□□□□□ -0.62
SSR4-204ENST00000370087 CBX5P45973 191 aa11.16□□□□□ -0.62
SSR4-204ENST00000370087 TMEM187Q14656 261 aa11.16□□□□□ -0.62
SSR4-204ENST00000370087 SPCS2Q15005 226 aa11.16□□□□□ -0.62
SSR4-204ENST00000370087 FAM90A2PQ658T7 463 aa11.16□□□□□ -0.62
SSR4-204ENST00000370087 ZNF66Q6ZN08 573 aa11.16□□□□□ -0.62
SSR4-204ENST00000370087 SPAG16Q8N0X2 631 aa11.16□□□□□ -0.62
SSR4-204ENST00000370087 FAM24BQ8N5W8 94 aa11.16□□□□□ -0.62
SSR4-204ENST00000370087 UBAC2Q8NBM4 344 aa11.16□□□□□ -0.62
SSR4-204ENST00000370087 SCARB1Q8WTV0 552 aa11.16□□□□□ -0.62
SSR4-204ENST00000370087 C15orf40Q8WUR7 153 aa11.16□□□□□ -0.62
SSR4-204ENST00000370087 RHPN1-AS1Q9BWJ2 59 aa11.16□□□□□ -0.62
SSR4-204ENST00000370087 SCRT1Q9BWW7 348 aa11.16□□□□□ -0.62
SSR4-204ENST00000370087 QTRT1Q9BXR0 403 aaKnown RBP11.16□□□□□ -0.62
SSR4-204ENST00000370087 HRH4Q9H3N8 390 aa11.16□□□□□ -0.62
SSR4-204ENST00000370087 CCL28Q9NRJ3 127 aa11.16□□□□□ -0.62
SSR4-204ENST00000370087 THYN1Q9P016 225 aa11.16□□□□□ -0.62
SSR4-204ENST00000370087 RSL24D1Q9UHA3 163 aaKnown RBP11.16□□□□□ -0.62
SSR4-204ENST00000370087 IGHV3OR16-13A0A075B7E8 117 aa11.15□□□□□ -0.62
SSR4-204ENST00000370087 IGHV3-74A0A0B4J1X5 117 aa11.15□□□□□ -0.62
SSR4-204ENST00000370087 C15orf62A8K5M9 175 aa11.15□□□□□ -0.62
SSR4-204ENST00000370087 K7EIM0 57 aa11.15□□□□□ -0.62
SSR4-204ENST00000370087 SULT1C2O00338 296 aa11.15□□□□□ -0.62
SSR4-204ENST00000370087 SSX5O60225 188 aa11.15□□□□□ -0.62
SSR4-204ENST00000370087 CTXN2P0C2S0 81 aa11.15□□□□□ -0.62
SSR4-204ENST00000370087 OR13C7P0DN81 318 aa11.15□□□□□ -0.62
SSR4-204ENST00000370087 PTHLHP12272 177 aa11.15□□□□□ -0.62
SSR4-204ENST00000370087 LEMD1Q68G75 181 aa11.15□□□□□ -0.62
SSR4-204ENST00000370087 SLC25A24Q6NUK1 477 aa11.15□□□□□ -0.62
SSR4-204ENST00000370087 SPSB3Q6PJ21 355 aa11.15□□□□□ -0.62
SSR4-204ENST00000370087 TMEM116Q8NCL8 245 aa11.15□□□□□ -0.62
SSR4-204ENST00000370087 SRSF8Q9BRL6 282 aaKnown RBP11.15□□□□□ -0.62
SSR4-204ENST00000370087 AUNIPQ9H7T9 357 aa11.15□□□□□ -0.62
SSR4-204ENST00000370087 TMEM140Q9NV12 185 aa11.15□□□□□ -0.62
SSR4-204ENST00000370087 C21orf62Q9NYP8 219 aa11.15□□□□□ -0.62
SSR4-204ENST00000370087 AGRNO00468 2067 aa11.15□□□□□ -0.63
SSR4-204ENST00000370087 ELOA3CA0A087WX78 387 aaPredicted RBP11.14□□□□□ -0.63
SSR4-204ENST00000370087 HPGDSO60760 199 aa11.14□□□□□ -0.63
SSR4-204ENST00000370087 SERPINE2P07093 398 aa11.14□□□□□ -0.63
SSR4-204ENST00000370087 POU2AF1Q16633 256 aa11.14□□□□□ -0.63
SSR4-204ENST00000370087 CNIH2Q6PI25 160 aa11.14□□□□□ -0.63
SSR4-204ENST00000370087 DYNC2LI1Q8TCX1 351 aa11.14□□□□□ -0.63
SSR4-204ENST00000370087 SECTM1Q8WVN6 248 aa11.14□□□□□ -0.63
SSR4-204ENST00000370087 COMMD5Q9GZQ3 224 aa11.14□□□□□ -0.63
SSR4-204ENST00000370087 IFT46Q9NQC8 304 aa11.14□□□□□ -0.63
SSR4-204ENST00000370087 APOBP04114 4563 aaKnown RBP11.14□□□□□ -0.63
SSR4-204ENST00000370087 TRAV10A0A0B4J240 114 aa11.13□□□□□ -0.63
SSR4-204ENST00000370087 TEX50A0A1B0GTY4 177 aa11.13□□□□□ -0.63
SSR4-204ENST00000370087 C15orf61A6NNL5 157 aa11.13□□□□□ -0.63
SSR4-204ENST00000370087 EIF4EP06730 217 aaKnown RBP11.13□□□□□ -0.63
SSR4-204ENST00000370087 CTSGP08311 255 aa11.13□□□□□ -0.63
SSR4-204ENST00000370087 PRSS3P35030 304 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms