RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 GLYATL2Q8WU03 294 aa14.22□□□□□ -0.13
CHTOP-202ENST00000368687 PLEKHA3Q9HB20 300 aa14.22□□□□□ -0.13
CHTOP-202ENST00000368687 PEMTQ9UBM1 199 aa14.22□□□□□ -0.13
CHTOP-202ENST00000368687 F11RQ9Y624 299 aaKnown RBP14.22□□□□□ -0.13
CHTOP-202ENST00000368687 SORL1Q92673 2214 aa14.21□□□□□ -0.13
CHTOP-202ENST00000368687 GGCTO75223 188 aaKnown RBP14.21□□□□□ -0.13
CHTOP-202ENST00000368687 IGKV1-5P01602 117 aa14.21□□□□□ -0.13
CHTOP-202ENST00000368687 ERHP84090 104 aaKnown RBP14.21□□□□□ -0.13
CHTOP-202ENST00000368687 DEFA5Q01523 94 aa14.21□□□□□ -0.13
CHTOP-202ENST00000368687 ZNF114Q8NC26 417 aa14.21□□□□□ -0.13
CHTOP-202ENST00000368687 OR1P1Q8NH06 330 aa14.21□□□□□ -0.13
CHTOP-202ENST00000368687 MRAPQ8TCY5 172 aa14.21□□□□□ -0.13
CHTOP-202ENST00000368687 TMEM56-RWDD3S4R434 201 aa14.21□□□□□ -0.13
CHTOP-202ENST00000368687 DNAH3Q8TD57 4116 aa14.2□□□□□ -0.14
CHTOP-202ENST00000368687 CENPXA8MT69 81 aa14.2□□□□□ -0.14
CHTOP-202ENST00000368687 INS-IGF2F8WCM5 200 aa14.2□□□□□ -0.14
CHTOP-202ENST00000368687 KRTAP10-11P60412 298 aa14.2□□□□□ -0.14
CHTOP-202ENST00000368687 RBMS2Q15434 407 aaKnown RBP14.2□□□□□ -0.14
CHTOP-202ENST00000368687 TMEM128Q5BJH2 165 aa14.2□□□□□ -0.14
CHTOP-202ENST00000368687 SLC35G3Q8N808 338 aa14.2□□□□□ -0.14
CHTOP-202ENST00000368687 OR9G4Q8NGQ1 327 aa14.2□□□□□ -0.14
CHTOP-202ENST00000368687 C7orf50Q9BRJ6 194 aaKnown RBP14.2□□□□□ -0.14
CHTOP-202ENST00000368687 GAR1Q9NY12 217 aaKnown RBP14.2□□□□□ -0.14
CHTOP-202ENST00000368687 DBX1A6NMT0 343 aa14.19□□□□□ -0.14
CHTOP-202ENST00000368687 BMPR1BO00238 502 aa14.19□□□□□ -0.14
CHTOP-202ENST00000368687 NDUFB8O95169 186 aa14.19□□□□□ -0.14
CHTOP-202ENST00000368687 IFNA17P01571 189 aa14.19□□□□□ -0.14
CHTOP-202ENST00000368687 AKR1C4P17516 323 aa14.19□□□□□ -0.14
CHTOP-202ENST00000368687 SYNJ2BPP57105 145 aa14.19□□□□□ -0.14
CHTOP-202ENST00000368687 SLC25A24Q6NUK1 477 aa14.19□□□□□ -0.14
CHTOP-202ENST00000368687 ENY2Q9NPA8 101 aa14.19□□□□□ -0.14
CHTOP-202ENST00000368687 SIGLEC8Q9NYZ4 499 aa14.19□□□□□ -0.14
CHTOP-202ENST00000368687 A0A0B4J293 547 aa14.18□□□□□ -0.14
CHTOP-202ENST00000368687 TRBV12-3P01733 135 aa14.18□□□□□ -0.14
CHTOP-202ENST00000368687 ARL3P36405 182 aa14.18□□□□□ -0.14
CHTOP-202ENST00000368687 UBE2MP61081 183 aaKnown RBP14.18□□□□□ -0.14
CHTOP-202ENST00000368687 AARDQ4LEZ3 155 aa14.18□□□□□ -0.14
CHTOP-202ENST00000368687 TMEM268Q5VZI3 342 aa14.18□□□□□ -0.14
CHTOP-202ENST00000368687 C19orf35Q6ZS72 473 aa14.18□□□□□ -0.14
CHTOP-202ENST00000368687 OR2C3Q8N628 320 aa14.18□□□□□ -0.14
CHTOP-202ENST00000368687 OR52E5Q8NH55 327 aa14.18□□□□□ -0.14
CHTOP-202ENST00000368687 CCDC140Q96MF4 163 aa14.18□□□□□ -0.14
CHTOP-202ENST00000368687 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.18□□□□□ -0.14
CHTOP-202ENST00000368687 ZNF256Q9Y2P7 627 aaPredicted RBP14.18□□□□□ -0.14
CHTOP-202ENST00000368687 DUXBA0A1W2PPF3 345 aa14.17□□□□□ -0.14
CHTOP-202ENST00000368687 CORTO00230 105 aa14.17□□□□□ -0.14
CHTOP-202ENST00000368687 SNCAP37840 140 aa14.17□□□□□ -0.14
CHTOP-202ENST00000368687 SUB1P53999 127 aaKnown RBP eCLIP14.17□□□□□ -0.14
CHTOP-202ENST00000368687 TMEM187Q14656 261 aa14.17□□□□□ -0.14
CHTOP-202ENST00000368687 CNPY1Q3B7I2 92 aa14.17□□□□□ -0.14
CHTOP-202ENST00000368687 TMED4Q7Z7H5 227 aa14.17□□□□□ -0.14
CHTOP-202ENST00000368687 GPHB5Q86YW7 130 aa14.17□□□□□ -0.14
CHTOP-202ENST00000368687 SELENOHQ8IZQ5 122 aaKnown RBP14.17□□□□□ -0.14
CHTOP-202ENST00000368687 LGI3Q8N145 548 aa14.17□□□□□ -0.14
CHTOP-202ENST00000368687 ZNF502Q8TBZ5 544 aa14.17□□□□□ -0.14
CHTOP-202ENST00000368687 TMEM230Q96A57 120 aa14.17□□□□□ -0.14
CHTOP-202ENST00000368687 A0A0B4J2A0 478 aa14.16□□□□□ -0.14
CHTOP-202ENST00000368687 MFSD2BA6NFX1 497 aa14.16□□□□□ -0.14
CHTOP-202ENST00000368687 LGALS9O00182 355 aa14.16□□□□□ -0.14
CHTOP-202ENST00000368687 ST8SIA3O43173 380 aa14.16□□□□□ -0.14
CHTOP-202ENST00000368687 SPCS3P61009 180 aa14.16□□□□□ -0.14
CHTOP-202ENST00000368687 BAK1Q16611 211 aa14.16□□□□□ -0.14
CHTOP-202ENST00000368687 FAM106AQ4KMX7 169 aa14.16□□□□□ -0.14
CHTOP-202ENST00000368687 SPSB3Q6PJ21 355 aa14.16□□□□□ -0.14
CHTOP-202ENST00000368687 CLEC19AQ6UXS0 136 aa14.16□□□□□ -0.14
CHTOP-202ENST00000368687 BSCL2Q96G97 398 aaPredicted RBP14.16□□□□□ -0.14
CHTOP-202ENST00000368687 SHPKQ9UHJ6 478 aa14.16□□□□□ -0.14
CHTOP-202ENST00000368687 CLEC3BP05452 202 aa14.15□□□□□ -0.14
CHTOP-202ENST00000368687 IL7P13232 177 aa14.15□□□□□ -0.14
CHTOP-202ENST00000368687 HOXA1P49639 335 aaPredicted RBP14.15□□□□□ -0.14
CHTOP-202ENST00000368687 CENPSQ8N2Z9 138 aa14.15□□□□□ -0.14
CHTOP-202ENST00000368687 LHFPL5Q8TAF8 219 aa14.15□□□□□ -0.14
CHTOP-202ENST00000368687 S100ZQ8WXG8 99 aa14.15□□□□□ -0.14
CHTOP-202ENST00000368687 CCDC32Q9BV29 185 aa14.15□□□□□ -0.14
CHTOP-202ENST00000368687 BATF3Q9NR55 127 aa14.15□□□□□ -0.14
CHTOP-202ENST00000368687 C21orf62Q9NYP8 219 aa14.15□□□□□ -0.14
CHTOP-202ENST00000368687 DMRT1Q9Y5R6 373 aa14.15□□□□□ -0.14
CHTOP-202ENST00000368687 A6NHS1 94 aa14.14□□□□□ -0.15
CHTOP-202ENST00000368687 PPP5D1E7EU14 171 aa14.14□□□□□ -0.15
CHTOP-202ENST00000368687 K7EIL1 84 aa14.14□□□□□ -0.15
CHTOP-202ENST00000368687 IGLV1-51P01701 117 aa14.14□□□□□ -0.15
CHTOP-202ENST00000368687 SULT1A3P0DMM9 295 aa14.14□□□□□ -0.15
CHTOP-202ENST00000368687 SULT1A4P0DMN0 295 aa14.14□□□□□ -0.15
CHTOP-202ENST00000368687 SUPT4H1P63272 117 aaKnown RBP14.14□□□□□ -0.15
CHTOP-202ENST00000368687 IZUMO4Q1ZYL8 232 aa14.14□□□□□ -0.15
CHTOP-202ENST00000368687 PLET1Q6UQ28 207 aa14.14□□□□□ -0.15
CHTOP-202ENST00000368687 OR2K2Q8NGT1 345 aa14.14□□□□□ -0.15
CHTOP-202ENST00000368687 SDHCQ99643 169 aaPredicted RBP14.14□□□□□ -0.15
CHTOP-202ENST00000368687 TXN2Q99757 166 aa14.14□□□□□ -0.15
CHTOP-202ENST00000368687 PALMDQ9NP74 551 aa14.14□□□□□ -0.15
CHTOP-202ENST00000368687 CACNG5Q9UF02 275 aa14.14□□□□□ -0.15
CHTOP-202ENST00000368687 WI2-2373I1.2A0A1W2PRP0 233 aa14.13□□□□□ -0.15
CHTOP-202ENST00000368687 NDUFB6O95139 128 aa14.13□□□□□ -0.15
CHTOP-202ENST00000368687 IGHV3-23P01764 117 aa14.13□□□□□ -0.15
CHTOP-202ENST00000368687 VAMP1P23763 118 aa14.13□□□□□ -0.15
CHTOP-202ENST00000368687 FCGR2BP31994 310 aaPredicted RBP14.13□□□□□ -0.15
CHTOP-202ENST00000368687 GPR183P32249 361 aa14.13□□□□□ -0.15
CHTOP-202ENST00000368687 CCR6P51684 374 aa14.13□□□□□ -0.15
CHTOP-202ENST00000368687 LRTM2Q8N967 370 aa14.13□□□□□ -0.15
CHTOP-202ENST00000368687 SCARB1Q8WTV0 552 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms