RNA–Protein interactions for RNA: ENST00000368453.8

SHC1-205, Transcript of SHC adaptor protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHC1, Length 3,062 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-205ENST00000368453 C11orf52Q96A22 123 aa12.41□□□□□ -0.42
SHC1-205ENST00000368453 OOEPA6NGQ2 149 aa12.41□□□□□ -0.42
SHC1-205ENST00000368453 ALKBH6Q3KRA9 238 aa12.41□□□□□ -0.42
SHC1-205ENST00000368453 OR8B3Q8NGG8 313 aa12.41□□□□□ -0.42
SHC1-205ENST00000368453 SAP30LQ9HAJ7 183 aa12.41□□□□□ -0.42
SHC1-205ENST00000368453 LY96Q9Y6Y9 160 aa12.41□□□□□ -0.42
SHC1-205ENST00000368453 GFRA3O60609 400 aa12.4□□□□□ -0.42
SHC1-205ENST00000368453 COX6A1P12074 109 aa12.4□□□□□ -0.42
SHC1-205ENST00000368453 FOXF2Q12947 444 aa12.4□□□□□ -0.42
SHC1-205ENST00000368453 BVES-AS1Q5T3Y7 98 aa12.4□□□□□ -0.42
SHC1-205ENST00000368453 LINC00173Q6ZV60 143 aa12.4□□□□□ -0.42
SHC1-205ENST00000368453 SSX8Q7RTT4 187 aa12.4□□□□□ -0.42
SHC1-205ENST00000368453 OBP2BQ9NPH6 170 aa12.4□□□□□ -0.42
SHC1-205ENST00000368453 ISLRO14498 428 aa12.4□□□□□ -0.42
SHC1-205ENST00000368453 UQCRFS1P47985 274 aa12.4□□□□□ -0.42
SHC1-205ENST00000368453 HES3Q5TGS1 186 aa12.4□□□□□ -0.42
SHC1-205ENST00000368453 MRPL14Q6P1L8 145 aaKnown RBP12.4□□□□□ -0.42
SHC1-205ENST00000368453 IMMP1LQ96LU5 166 aa12.4□□□□□ -0.42
SHC1-205ENST00000368453 AP1S3Q96PC3 154 aa12.4□□□□□ -0.42
SHC1-205ENST00000368453 TMEM167BQ9NRX6 74 aa12.4□□□□□ -0.42
SHC1-205ENST00000368453 MRPL27Q9P0M9 148 aaKnown RBP12.4□□□□□ -0.42
SHC1-205ENST00000368453 AREGP15514 252 aa12.39□□□□□ -0.43
SHC1-205ENST00000368453 ARR3P36575 388 aa12.39□□□□□ -0.43
SHC1-205ENST00000368453 OR1C1Q15619 314 aa12.39□□□□□ -0.43
SHC1-205ENST00000368453 MOB3BQ86TA1 216 aa12.39□□□□□ -0.43
SHC1-205ENST00000368453 OR52E5Q8NH55 327 aa12.39□□□□□ -0.43
SHC1-205ENST00000368453 NABP2Q9BQ15 211 aa12.39□□□□□ -0.43
SHC1-205ENST00000368453 WDR54Q9H977 334 aa12.39□□□□□ -0.43
SHC1-205ENST00000368453 ICE1Q9Y2F5 2266 aa12.39□□□□□ -0.43
SHC1-205ENST00000368453 C2CD4DB7Z1M9 353 aa12.39□□□□□ -0.43
SHC1-205ENST00000368453 ARG2P78540 354 aa12.39□□□□□ -0.43
SHC1-205ENST00000368453 NAA38Q9BRA0 125 aaKnown RBP12.39□□□□□ -0.43
SHC1-205ENST00000368453 HES4Q9HCC6 221 aa12.39□□□□□ -0.43
SHC1-205ENST00000368453 TCF19Q9Y242 345 aa12.39□□□□□ -0.43
SHC1-205ENST00000368453 TRAV8-6A0A0B4J262 113 aa12.39□□□□□ -0.43
SHC1-205ENST00000368453 C2orf70A6NJV1 201 aa12.39□□□□□ -0.43
SHC1-205ENST00000368453 TCTAP57738 103 aa12.39□□□□□ -0.43
SHC1-205ENST00000368453 RHOGP84095 191 aa12.39□□□□□ -0.43
SHC1-205ENST00000368453 C12orf54Q6X4T0 127 aa12.39□□□□□ -0.43
SHC1-205ENST00000368453 Q8IYB0 196 aa12.39□□□□□ -0.43
SHC1-205ENST00000368453 CDX2Q99626 313 aaPredicted RBP12.39□□□□□ -0.43
SHC1-205ENST00000368453 GAGE10A6NGK3 116 aa12.38□□□□□ -0.43
SHC1-205ENST00000368453 GGTLC3B5MD39 225 aa12.38□□□□□ -0.43
SHC1-205ENST00000368453 MYOD1P15172 320 aa12.38□□□□□ -0.43
SHC1-205ENST00000368453 C3AR1Q16581 482 aa12.38□□□□□ -0.43
SHC1-205ENST00000368453 RPL39P5Q59GN2 51 aa12.38□□□□□ -0.43
SHC1-205ENST00000368453 OR13A1Q8NGR1 328 aa12.38□□□□□ -0.43
SHC1-205ENST00000368453 SMIM27A0A1W2PRY6 76 aa12.38□□□□□ -0.43
SHC1-205ENST00000368453 TBR1Q16650 682 aa12.38□□□□□ -0.43
SHC1-205ENST00000368453 NUP35Q8NFH5 326 aa12.38□□□□□ -0.43
SHC1-205ENST00000368453 SARAFQ96BY9 339 aa12.38□□□□□ -0.43
SHC1-205ENST00000368453 FNDC4Q9H6D8 234 aaPredicted RBP12.38□□□□□ -0.43
SHC1-205ENST00000368453 PRRC2CQ9Y520 2896 aaKnown RBP12.37□□□□□ -0.43
SHC1-205ENST00000368453 PPIAL4DF5H284 164 aa12.37□□□□□ -0.43
SHC1-205ENST00000368453 CORTO00230 105 aa12.37□□□□□ -0.43
SHC1-205ENST00000368453 LEPROTL1O95214 131 aa12.37□□□□□ -0.43
SHC1-205ENST00000368453 GDF5OSQ5U4N7 250 aa12.37□□□□□ -0.43
SHC1-205ENST00000368453 CHRDL1Q9BU40 450 aa12.37□□□□□ -0.43
SHC1-205ENST00000368453 TMEM140Q9NV12 185 aa12.37□□□□□ -0.43
SHC1-205ENST00000368453 DUSP13Q9UII6 198 aa12.37□□□□□ -0.43
SHC1-205ENST00000368453 PINLYPA6NC86 204 aa12.37□□□□□ -0.43
SHC1-205ENST00000368453 CELA3AP09093 270 aa12.37□□□□□ -0.43
SHC1-205ENST00000368453 ZNF137PP52743 207 aa12.37□□□□□ -0.43
SHC1-205ENST00000368453 DEFB125Q8N687 156 aa12.37□□□□□ -0.43
SHC1-205ENST00000368453 NCKAP5O14513 1909 aa12.37□□□□□ -0.43
SHC1-205ENST00000368453 SPINK14Q6IE38 97 aa12.36□□□□□ -0.43
SHC1-205ENST00000368453 SMIM12Q96EX1 92 aa12.36□□□□□ -0.43
SHC1-205ENST00000368453 C1orf159Q96HA4 380 aa12.36□□□□□ -0.43
SHC1-205ENST00000368453 S1PR3Q99500 378 aa12.36□□□□□ -0.43
SHC1-205ENST00000368453 ZNF430Q9H8G1 570 aaPredicted RBP12.36□□□□□ -0.43
SHC1-205ENST00000368453 HIGD1CA8MV81 97 aa12.36□□□□□ -0.43
SHC1-205ENST00000368453 SPINT2O43291 252 aa12.36□□□□□ -0.43
SHC1-205ENST00000368453 CSN3P07498 182 aa12.36□□□□□ -0.43
SHC1-205ENST00000368453 VDAC2P45880 294 aaPredicted RBP12.36□□□□□ -0.43
SHC1-205ENST00000368453 COQ2Q96H96 371 aa12.36□□□□□ -0.43
SHC1-205ENST00000368453 TMEM191AQ9H0A3 160 aa12.36□□□□□ -0.43
SHC1-205ENST00000368453 METRNQ9UJH8 293 aa12.36□□□□□ -0.43
SHC1-205ENST00000368453 TET2Q6N021 2002 aaPredicted RBP12.36□□□□□ -0.43
SHC1-205ENST00000368453 ZNF138P52744 262 aa12.36□□□□□ -0.43
SHC1-205ENST00000368453 ZNF146Q15072 292 aa12.36□□□□□ -0.43
SHC1-205ENST00000368453 FAM214BQ7L5A3 538 aa12.36□□□□□ -0.43
SHC1-205ENST00000368453 OR2V2Q96R30 315 aa12.36□□□□□ -0.43
SHC1-205ENST00000368453 ST20Q9HBF5 79 aa12.36□□□□□ -0.43
SHC1-205ENST00000368453 LSM4Q9Y4Z0 139 aaKnown RBP12.36□□□□□ -0.43
SHC1-205ENST00000368453 TRAV5A0A0B4J249 113 aa12.35□□□□□ -0.43
SHC1-205ENST00000368453 IGLV2-8P01709 118 aa12.35□□□□□ -0.43
SHC1-205ENST00000368453 CCL4P13236 92 aa12.35□□□□□ -0.43
SHC1-205ENST00000368453 DUTP33316 252 aaKnown RBP12.35□□□□□ -0.43
SHC1-205ENST00000368453 PPOXP50336 477 aa12.35□□□□□ -0.43
SHC1-205ENST00000368453 MLANAQ16655 118 aa12.35□□□□□ -0.43
SHC1-205ENST00000368453 C1orf185Q5T7R7 199 aa12.35□□□□□ -0.43
SHC1-205ENST00000368453 Q6ZR03 302 aa12.35□□□□□ -0.43
SHC1-205ENST00000368453 MDP1Q86V88 176 aa12.35□□□□□ -0.43
SHC1-205ENST00000368453 SNRNP40Q96DI7 357 aaKnown RBP12.35□□□□□ -0.43
SHC1-205ENST00000368453 ARFGEF3Q5TH69 2177 aa12.35□□□□□ -0.43
SHC1-205ENST00000368453 SYS1-DBNDD2H3BUS1 97 aa12.35□□□□□ -0.43
SHC1-205ENST00000368453 UBE2L3P68036 154 aaKnown RBP12.35□□□□□ -0.43
SHC1-205ENST00000368453 EIF4EBP1Q13541 118 aaPredicted RBP12.35□□□□□ -0.43
SHC1-205ENST00000368453 LEAP2Q969E1 77 aa12.35□□□□□ -0.43
SHC1-205ENST00000368453 ABCA1O95477 2261 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms