RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 C15orf53Q8NAA6 179 aa10.3□□□□□ -0.76
VAMP4-202ENST00000367740 DUSP18Q8NEJ0 188 aa10.3□□□□□ -0.76
VAMP4-202ENST00000367740 PHYHIPQ92561 330 aa10.3□□□□□ -0.76
VAMP4-202ENST00000367740 SLC7A6OSQ96CW6 309 aaPredicted RBP10.3□□□□□ -0.76
VAMP4-202ENST00000367740 GRAMD2BQ96HH9 432 aa10.3□□□□□ -0.76
VAMP4-202ENST00000367740 GPHA2Q96T91 129 aa10.3□□□□□ -0.76
VAMP4-202ENST00000367740 KRTAP1-5Q9BYS1 174 aa10.3□□□□□ -0.76
VAMP4-202ENST00000367740 COMMD5Q9GZQ3 224 aa10.3□□□□□ -0.76
VAMP4-202ENST00000367740 F11RQ9Y624 299 aaKnown RBP10.3□□□□□ -0.76
VAMP4-202ENST00000367740 TMEM189A5PLL7 270 aa10.29□□□□□ -0.76
VAMP4-202ENST00000367740 HLA-DQB1P01920 261 aa10.29□□□□□ -0.76
VAMP4-202ENST00000367740 CD1AP06126 327 aa10.29□□□□□ -0.76
VAMP4-202ENST00000367740 ZNF705AQ6ZN79 300 aaPredicted RBP10.29□□□□□ -0.76
VAMP4-202ENST00000367740 OR56B1Q8NGI3 324 aa10.29□□□□□ -0.76
VAMP4-202ENST00000367740 NEU1Q99519 415 aa10.29□□□□□ -0.76
VAMP4-202ENST00000367740 NXF2Q9GZY0 626 aaKnown RBP10.29□□□□□ -0.76
VAMP4-202ENST00000367740 TAS2R8Q9NYW2 309 aa10.29□□□□□ -0.76
VAMP4-202ENST00000367740 XCL2Q9UBD3 114 aa10.29□□□□□ -0.76
VAMP4-202ENST00000367740 OR2W1Q9Y3N9 320 aa10.29□□□□□ -0.76
VAMP4-202ENST00000367740 TEX48A0A1B0GUV7 120 aa10.28□□□□□ -0.76
VAMP4-202ENST00000367740 ZNF705FA8MVS1 300 aaPredicted RBP10.28□□□□□ -0.76
VAMP4-202ENST00000367740 UPK2O00526 184 aa10.28□□□□□ -0.76
VAMP4-202ENST00000367740 ZNF705DP0CH99 300 aaPredicted RBP10.28□□□□□ -0.76
VAMP4-202ENST00000367740 ZNF705BP0CI00 300 aaPredicted RBP10.28□□□□□ -0.76
VAMP4-202ENST00000367740 OXA1LQ15070 435 aa10.28□□□□□ -0.76
VAMP4-202ENST00000367740 STXBP6Q8NFX7 210 aa10.28□□□□□ -0.76
VAMP4-202ENST00000367740 GFI1Q99684 422 aa10.28□□□□□ -0.76
VAMP4-202ENST00000367740 GINS3Q9BRX5 216 aa10.28□□□□□ -0.76
VAMP4-202ENST00000367740 C1QTNF4Q9BXJ3 329 aa10.28□□□□□ -0.76
VAMP4-202ENST00000367740 SLC22A5O76082 557 aa10.27□□□□□ -0.77
VAMP4-202ENST00000367740 SMR3BP02814 79 aaPredicted RBP10.27□□□□□ -0.77
VAMP4-202ENST00000367740 NFYAP23511 347 aaPredicted RBP10.27□□□□□ -0.77
VAMP4-202ENST00000367740 FUSP35637 526 aaKnown RBP eCLIP10.27□□□□□ -0.77
VAMP4-202ENST00000367740 ACSM3Q53FZ2 586 aa10.27□□□□□ -0.77
VAMP4-202ENST00000367740 THOC7Q6I9Y2 204 aaKnown RBP10.27□□□□□ -0.77
VAMP4-202ENST00000367740 Q6ZS49 121 aa10.27□□□□□ -0.77
VAMP4-202ENST00000367740 C17orf77Q96MU5 243 aa10.27□□□□□ -0.77
VAMP4-202ENST00000367740 LOC100130705A0A1B0GUX0 176 aa10.26□□□□□ -0.77
VAMP4-202ENST00000367740 IRGMA1A4Y4 181 aa10.26□□□□□ -0.77
VAMP4-202ENST00000367740 SLC17A2O00624 439 aa10.26□□□□□ -0.77
VAMP4-202ENST00000367740 FGF2P09038 288 aa10.26□□□□□ -0.77
VAMP4-202ENST00000367740 TRAPPC2P0DI81 140 aa10.26□□□□□ -0.77
VAMP4-202ENST00000367740 TRAPPC2BP0DI82 140 aa10.26□□□□□ -0.77
VAMP4-202ENST00000367740 FGF9P31371 208 aaPredicted RBP10.26□□□□□ -0.77
VAMP4-202ENST00000367740 TOMM20LQ6UXN7 152 aa10.26□□□□□ -0.77
VAMP4-202ENST00000367740 HSD17B13Q7Z5P4 300 aaPredicted RBP10.26□□□□□ -0.77
VAMP4-202ENST00000367740 CBR4Q8N4T8 237 aa10.26□□□□□ -0.77
VAMP4-202ENST00000367740 DCANP1Q8TF63 244 aa10.26□□□□□ -0.77
VAMP4-202ENST00000367740 RAB3CQ96E17 227 aa10.26□□□□□ -0.77
VAMP4-202ENST00000367740 TMEM80Q96HE8 168 aa10.26□□□□□ -0.77
VAMP4-202ENST00000367740 PLGRKTQ9HBL7 147 aa10.26□□□□□ -0.77
VAMP4-202ENST00000367740 TEX50A0A1B0GTY4 177 aa10.25□□□□□ -0.77
VAMP4-202ENST00000367740 MFNGO00587 321 aa10.25□□□□□ -0.77
VAMP4-202ENST00000367740 GNB3P16520 340 aa10.25□□□□□ -0.77
VAMP4-202ENST00000367740 CLDN12P56749 244 aa10.25□□□□□ -0.77
VAMP4-202ENST00000367740 POU2AF1Q16633 256 aa10.25□□□□□ -0.77
VAMP4-202ENST00000367740 SERTAD4-AS1Q5TG53 156 aa10.25□□□□□ -0.77
VAMP4-202ENST00000367740 Q6ZSN1 163 aa10.25□□□□□ -0.77
VAMP4-202ENST00000367740 ZNF503Q96F45 646 aa10.25□□□□□ -0.77
VAMP4-202ENST00000367740 RAB40CQ96S21 281 aa10.25□□□□□ -0.77
VAMP4-202ENST00000367740 TMEM140Q9NV12 185 aa10.25□□□□□ -0.77
VAMP4-202ENST00000367740 LINC00588Q9Y4M8 146 aa10.25□□□□□ -0.77
VAMP4-202ENST00000367740 RFNGQ9Y644 331 aa10.25□□□□□ -0.77
VAMP4-202ENST00000367740 SMIM9A6NGZ8 99 aa10.24□□□□□ -0.77
VAMP4-202ENST00000367740 TAS2R31P59538 309 aa10.24□□□□□ -0.77
VAMP4-202ENST00000367740 NUTF2P61970 127 aaKnown RBP10.24□□□□□ -0.77
VAMP4-202ENST00000367740 HSD17B12Q53GQ0 312 aa10.24□□□□□ -0.77
VAMP4-202ENST00000367740 SPAG16Q8N0X2 631 aa10.24□□□□□ -0.77
VAMP4-202ENST00000367740 CCDC197Q8NCU1 140 aa10.24□□□□□ -0.77
VAMP4-202ENST00000367740 LSM10Q969L4 123 aaKnown RBP10.24□□□□□ -0.77
VAMP4-202ENST00000367740 AIFM2Q9BRQ8 373 aa10.24□□□□□ -0.77
VAMP4-202ENST00000367740 CENPOQ9BU64 300 aa10.24□□□□□ -0.77
VAMP4-202ENST00000367740 NDUFA4L2Q9NRX3 87 aa10.24□□□□□ -0.77
VAMP4-202ENST00000367740 A0A075B6Q4 140 aa10.23□□□□□ -0.77
VAMP4-202ENST00000367740 I3L2K1 104 aa10.23□□□□□ -0.77
VAMP4-202ENST00000367740 TNFSF12O43508 249 aa10.23□□□□□ -0.77
VAMP4-202ENST00000367740 DENRO43583 198 aaKnown RBP10.23□□□□□ -0.77
VAMP4-202ENST00000367740 MFAP4P55083 255 aa10.23□□□□□ -0.77
VAMP4-202ENST00000367740 DLK1P80370 383 aa10.23□□□□□ -0.77
VAMP4-202ENST00000367740 RCN1Q15293 331 aa10.23□□□□□ -0.77
VAMP4-202ENST00000367740 PSMG4Q5JS54 123 aa10.23□□□□□ -0.77
VAMP4-202ENST00000367740 C1orf146Q5VVC0 180 aa10.23□□□□□ -0.77
VAMP4-202ENST00000367740 SYT8Q8NBV8 401 aa10.23□□□□□ -0.77
VAMP4-202ENST00000367740 SLC25A46Q96AG3 418 aa10.23□□□□□ -0.77
VAMP4-202ENST00000367740 TXN2Q99757 166 aa10.23□□□□□ -0.77
VAMP4-202ENST00000367740 DCSTAMPQ9H295 470 aa10.23□□□□□ -0.77
VAMP4-202ENST00000367740 TMEM231Q9H6L2 316 aa10.23□□□□□ -0.77
VAMP4-202ENST00000367740 PTTG2Q9NZH5 202 aa10.23□□□□□ -0.77
VAMP4-202ENST00000367740 IGHV3OR16-12A0A075B7B8 117 aa10.22□□□□□ -0.77
VAMP4-202ENST00000367740 EFCAB10A6NFE3 127 aa10.22□□□□□ -0.77
VAMP4-202ENST00000367740 KRTAP29-1A8MX34 341 aaPredicted RBP10.22□□□□□ -0.77
VAMP4-202ENST00000367740 RBFOX2O43251 390 aaKnown RBP eCLIP10.22□□□□□ -0.77
VAMP4-202ENST00000367740 IGHV3-48P01763 117 aa10.22□□□□□ -0.77
VAMP4-202ENST00000367740 NQO2P16083 231 aa10.22□□□□□ -0.77
VAMP4-202ENST00000367740 HIST1H1DP16402 221 aaKnown RBP10.22□□□□□ -0.77
VAMP4-202ENST00000367740 WNT4P56705 351 aa10.22□□□□□ -0.77
VAMP4-202ENST00000367740 RAB11BQ15907 218 aa10.22□□□□□ -0.77
VAMP4-202ENST00000367740 OR1L8Q8NGR8 309 aa10.22□□□□□ -0.77
VAMP4-202ENST00000367740 FAM3DQ96BQ1 224 aa10.22□□□□□ -0.77
VAMP4-202ENST00000367740 HINT2Q9BX68 163 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms