RNA–Protein interactions for RNA: ENST00000367178.7

SCAF8-201, Transcript of SR-related CTD associated factor 8, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCAF8, Length 5,057 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-201ENST00000367178 RNASEH2CQ8TDP1 164 aaKnown RBP13.81□□□□□ -0.2
SCAF8-201ENST00000367178 COL4A6Q14031 1691 aa13.8□□□□□ -0.2
SCAF8-201ENST00000367178 FOXI3A8MTJ6 420 aaPredicted RBP13.8□□□□□ -0.2
SCAF8-201ENST00000367178 SAPCD1Q5SSQ6 148 aa13.8□□□□□ -0.2
SCAF8-201ENST00000367178 HIST1H2BAQ96A08 127 aa13.8□□□□□ -0.2
SCAF8-201ENST00000367178 IGKV1D-8A0A087WSZ0 117 aa13.8□□□□□ -0.2
SCAF8-201ENST00000367178 NPIPB6E9PJ23 425 aa13.8□□□□□ -0.2
SCAF8-201ENST00000367178 M0QZK8 103 aa13.8□□□□□ -0.2
SCAF8-201ENST00000367178 GGCTO75223 188 aaKnown RBP13.8□□□□□ -0.2
SCAF8-201ENST00000367178 TRAV14DV4A0A0A6YYC5 116 aa13.8□□□□□ -0.2
SCAF8-201ENST00000367178 UPK2O00526 184 aa13.8□□□□□ -0.2
SCAF8-201ENST00000367178 ZNF207O43670 478 aaKnown RBP13.8□□□□□ -0.2
SCAF8-201ENST00000367178 ELOVL1Q9BW60 279 aa13.8□□□□□ -0.2
SCAF8-201ENST00000367178 ZSWIM8A7E2V4 1837 aa13.8□□□□□ -0.2
SCAF8-201ENST00000367178 SRRM5B3KS81 715 aa13.8□□□□□ -0.2
SCAF8-201ENST00000367178 NBR2O15453 112 aa13.8□□□□□ -0.2
SCAF8-201ENST00000367178 CGAP01215 116 aa13.8□□□□□ -0.2
SCAF8-201ENST00000367178 GPX4P36969 197 aaPredicted RBP13.8□□□□□ -0.2
SCAF8-201ENST00000367178 SRSF6Q13247 344 aaKnown RBP13.8□□□□□ -0.2
SCAF8-201ENST00000367178 ZNF525Q8N782 197 aa13.8□□□□□ -0.2
SCAF8-201ENST00000367178 SFRP2Q96HF1 295 aa13.79□□□□□ -0.2
SCAF8-201ENST00000367178 NEU1Q99519 415 aa13.79□□□□□ -0.2
SCAF8-201ENST00000367178 DCAF16Q9NXF7 216 aa13.79□□□□□ -0.2
SCAF8-201ENST00000367178 ZFP30Q9Y2G7 519 aa13.79□□□□□ -0.2
SCAF8-201ENST00000367178 PF4P02776 101 aa13.79□□□□□ -0.2
SCAF8-201ENST00000367178 PSMB2P49721 201 aa13.79□□□□□ -0.2
SCAF8-201ENST00000367178 WNT10AQ9GZT5 417 aa13.79□□□□□ -0.2
SCAF8-201ENST00000367178 IGKV3-20P01619 116 aa13.79□□□□□ -0.2
SCAF8-201ENST00000367178 FAM53AQ6NSI3 398 aaPredicted RBP13.79□□□□□ -0.2
SCAF8-201ENST00000367178 C18orf12Q96KH6 178 aa13.79□□□□□ -0.2
SCAF8-201ENST00000367178 C19orf67A6NJJ6 358 aa13.78□□□□□ -0.2
SCAF8-201ENST00000367178 LBHQ53QV2 105 aaPredicted RBP13.78□□□□□ -0.2
SCAF8-201ENST00000367178 IGHV3-66A0A0C4DH42 116 aa13.78□□□□□ -0.2
SCAF8-201ENST00000367178 RBFOX2O43251 390 aaKnown RBP eCLIP13.78□□□□□ -0.2
SCAF8-201ENST00000367178 RPLP1P05386 114 aaKnown RBP13.78□□□□□ -0.2
SCAF8-201ENST00000367178 KIAA1644Q3SXP7 199 aa13.78□□□□□ -0.2
SCAF8-201ENST00000367178 WNK2Q9Y3S1 2297 aa13.78□□□□□ -0.2
SCAF8-201ENST00000367178 IGHV3OR16-8A0A075B7F1 116 aa13.78□□□□□ -0.2
SCAF8-201ENST00000367178 VENTXO95231 258 aa13.78□□□□□ -0.2
SCAF8-201ENST00000367178 MBNL2Q5VZF2 373 aaKnown RBP13.78□□□□□ -0.2
SCAF8-201ENST00000367178 ZNF502Q8TBZ5 544 aa13.78□□□□□ -0.2
SCAF8-201ENST00000367178 CREBBPQ92793 2442 aa13.77□□□□□ -0.2
SCAF8-201ENST00000367178 GATA2P23769 480 aaPredicted RBP13.77□□□□□ -0.2
SCAF8-201ENST00000367178 TMEM144Q7Z5S9 345 aa13.77□□□□□ -0.2
SCAF8-201ENST00000367178 OR52E5Q8NH55 327 aa13.77□□□□□ -0.2
SCAF8-201ENST00000367178 WFIKKN1Q96NZ8 548 aa13.77□□□□□ -0.2
SCAF8-201ENST00000367178 MAP1LC3AQ9H492 121 aa13.77□□□□□ -0.2
SCAF8-201ENST00000367178 SLC25A15Q9Y619 301 aa13.77□□□□□ -0.2
SCAF8-201ENST00000367178 RAMP3O60896 148 aa13.77□□□□□ -0.21
SCAF8-201ENST00000367178 SRIP30626 198 aa13.77□□□□□ -0.21
SCAF8-201ENST00000367178 LOC102724200A0A096LPH7 203 aaPredicted RBP13.77□□□□□ -0.21
SCAF8-201ENST00000367178 C15orf61A6NNL5 157 aa13.77□□□□□ -0.21
SCAF8-201ENST00000367178 B3GALT5-AS1P59052 145 aa13.77□□□□□ -0.21
SCAF8-201ENST00000367178 ZNF324BQ6AW86 544 aaPredicted RBP13.77□□□□□ -0.21
SCAF8-201ENST00000367178 OR1P1Q8NH06 330 aa13.77□□□□□ -0.21
SCAF8-201ENST00000367178 M0R3E3 92 aa13.77□□□□□ -0.21
SCAF8-201ENST00000367178 TRGC1P0CF51 173 aa13.77□□□□□ -0.21
SCAF8-201ENST00000367178 AREGP15514 252 aa13.77□□□□□ -0.21
SCAF8-201ENST00000367178 AMMECR1LQ6DCA0 310 aa13.77□□□□□ -0.21
SCAF8-201ENST00000367178 FAM159AQ6UWV7 190 aa13.77□□□□□ -0.21
SCAF8-201ENST00000367178 Q6ZS92 163 aa13.77□□□□□ -0.21
SCAF8-201ENST00000367178 TCF24Q7RTU0 167 aa13.77□□□□□ -0.21
SCAF8-201ENST00000367178 TEX45Q8NA69 505 aa13.77□□□□□ -0.21
SCAF8-201ENST00000367178 LEPROTL1O95214 131 aa13.76□□□□□ -0.21
SCAF8-201ENST00000367178 CD24P25063 80 aa13.76□□□□□ -0.21
SCAF8-201ENST00000367178 MPZP25189 248 aa13.76□□□□□ -0.21
SCAF8-201ENST00000367178 DUTP33316 252 aaKnown RBP13.76□□□□□ -0.21
SCAF8-201ENST00000367178 NMUP48645 174 aa13.76□□□□□ -0.21
SCAF8-201ENST00000367178 CLEC19AQ6UXS0 136 aa13.76□□□□□ -0.21
SCAF8-201ENST00000367178 MARVELD3Q96A59 401 aa13.76□□□□□ -0.21
SCAF8-201ENST00000367178 RNF126Q9BV68 326 aa13.76□□□□□ -0.21
SCAF8-201ENST00000367178 IGKV1-27A0A075B6S5 117 aa13.76□□□□□ -0.21
SCAF8-201ENST00000367178 RPL24P83731 157 aaKnown RBP13.76□□□□□ -0.21
SCAF8-201ENST00000367178 ZNF672Q499Z4 452 aaPredicted RBP13.76□□□□□ -0.21
SCAF8-201ENST00000367178 LY6G6FQ5SQ64 297 aa13.76□□□□□ -0.21
SCAF8-201ENST00000367178 USF3Q68DE3 2245 aa13.76□□□□□ -0.21
SCAF8-201ENST00000367178 OR1N2Q8NGR9 330 aa13.76□□□□□ -0.21
SCAF8-201ENST00000367178 PNRC2Q9NPJ4 139 aaKnown RBP13.76□□□□□ -0.21
SCAF8-201ENST00000367178 PLXNA3P51805 1871 aa13.76□□□□□ -0.21
SCAF8-201ENST00000367178 PCNX1Q96RV3 2341 aa13.76□□□□□ -0.21
SCAF8-201ENST00000367178 TCF21O43680 179 aa13.75□□□□□ -0.21
SCAF8-201ENST00000367178 SELLP14151 372 aa13.75□□□□□ -0.21
SCAF8-201ENST00000367178 BDP1A6H8Y1 2624 aa13.75□□□□□ -0.21
SCAF8-201ENST00000367178 C5orf52A6NGY3 159 aa13.75□□□□□ -0.21
SCAF8-201ENST00000367178 OR4C46A6NHA9 309 aa13.75□□□□□ -0.21
SCAF8-201ENST00000367178 TCTAP57738 103 aa13.75□□□□□ -0.21
SCAF8-201ENST00000367178 HEATR1Q9H583 2144 aaKnown RBP13.75□□□□□ -0.21
SCAF8-201ENST00000367178 IGHV3-11P01762 117 aa13.75□□□□□ -0.21
SCAF8-201ENST00000367178 RPUSD1Q9UJJ7 312 aaKnown RBP13.75□□□□□ -0.21
SCAF8-201ENST00000367178 CADP27708 2225 aa13.75□□□□□ -0.21
SCAF8-201ENST00000367178 MBD3L4A6NDZ8 208 aaPredicted RBP13.74□□□□□ -0.21
SCAF8-201ENST00000367178 MBD3L3A6NE82 208 aaPredicted RBP13.74□□□□□ -0.21
SCAF8-201ENST00000367178 MBD3L5A6NJ08 208 aaPredicted RBP13.74□□□□□ -0.21
SCAF8-201ENST00000367178 CRXO43186 299 aaPredicted RBP13.74□□□□□ -0.21
SCAF8-201ENST00000367178 FAM74A4Q5TZK3 123 aa13.74□□□□□ -0.21
SCAF8-201ENST00000367178 MIR17HGQ75NE6 70 aa13.74□□□□□ -0.21
SCAF8-201ENST00000367178 OR4X2Q8NGF9 303 aa13.74□□□□□ -0.21
SCAF8-201ENST00000367178 MBD3L2Q8NHZ7 208 aaPredicted RBP13.74□□□□□ -0.21
SCAF8-201ENST00000367178 C5orf63A6NC05 138 aa13.74□□□□□ -0.21
SCAF8-201ENST00000367178 IGHG3P01860 377 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms