RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 HLA-DQA1P01909 254 aa10.56□□□□□ -0.72
VAMP1-201ENST00000361716 MT-ND6P03923 174 aa10.56□□□□□ -0.72
VAMP1-201ENST00000361716 MIR17HGQ75NE6 70 aa10.56□□□□□ -0.72
VAMP1-201ENST00000361716 C18orf32Q8TCD1 76 aa10.56□□□□□ -0.72
VAMP1-201ENST00000361716 FAM168AQ92567 244 aa10.56□□□□□ -0.72
VAMP1-201ENST00000361716 LEAP2Q969E1 77 aa10.56□□□□□ -0.72
VAMP1-201ENST00000361716 GALMQ96C23 342 aa10.56□□□□□ -0.72
VAMP1-201ENST00000361716 SFXN3Q9BWM7 321 aa10.56□□□□□ -0.72
VAMP1-201ENST00000361716 CHRNA10Q9GZZ6 450 aa10.56□□□□□ -0.72
VAMP1-201ENST00000361716 NEURL1O76050 574 aa10.55□□□□□ -0.72
VAMP1-201ENST00000361716 TM4SF20Q53R12 229 aa10.55□□□□□ -0.72
VAMP1-201ENST00000361716 SPEM1Q8N4L4 309 aa10.55□□□□□ -0.72
VAMP1-201ENST00000361716 TMEM70Q9BUB7 260 aa10.55□□□□□ -0.72
VAMP1-201ENST00000361716 REPIN1Q9BWE0 567 aaKnown RBP10.55□□□□□ -0.72
VAMP1-201ENST00000361716 H3BUT2 72 aa10.55□□□□□ -0.72
VAMP1-201ENST00000361716 LINC00869P0C866 280 aa10.55□□□□□ -0.72
VAMP1-201ENST00000361716 SMAGPQ0VAQ4 97 aa10.55□□□□□ -0.72
VAMP1-201ENST00000361716 LRRC10Q5BKY1 277 aa10.55□□□□□ -0.72
VAMP1-201ENST00000361716 MUC15Q8N387 334 aa10.55□□□□□ -0.72
VAMP1-201ENST00000361716 TMEM45BQ96B21 275 aa10.55□□□□□ -0.72
VAMP1-201ENST00000361716 CLUHP3Q96NS8 147 aa10.55□□□□□ -0.72
VAMP1-201ENST00000361716 CEP295Q9C0D2 2601 aa10.55□□□□□ -0.72
VAMP1-201ENST00000361716 C7orf71A4D174 169 aa10.55□□□□□ -0.72
VAMP1-201ENST00000361716 MMP23AO75900 390 aa10.55□□□□□ -0.72
VAMP1-201ENST00000361716 OR10J3Q5JRS4 329 aa10.55□□□□□ -0.72
VAMP1-201ENST00000361716 TMEM251Q8N6I4 163 aa10.55□□□□□ -0.72
VAMP1-201ENST00000361716 DEFB108BQ8NET1 73 aa10.55□□□□□ -0.72
VAMP1-201ENST00000361716 TRIB1Q96RU8 372 aa10.55□□□□□ -0.72
VAMP1-201ENST00000361716 SF3B5Q9BWJ5 86 aaKnown RBP10.55□□□□□ -0.72
VAMP1-201ENST00000361716 GTSF1LQ9H1H1 148 aa10.55□□□□□ -0.72
VAMP1-201ENST00000361716 BOKQ9UMX3 212 aaPredicted RBP10.55□□□□□ -0.72
VAMP1-201ENST00000361716 CORTO00230 105 aa10.54□□□□□ -0.72
VAMP1-201ENST00000361716 AGFG2O95081 481 aa10.54□□□□□ -0.72
VAMP1-201ENST00000361716 IGLV2-14P01704 120 aa10.54□□□□□ -0.72
VAMP1-201ENST00000361716 RHOBP62745 196 aa10.54□□□□□ -0.72
VAMP1-201ENST00000361716 CX3CL1P78423 397 aa10.54□□□□□ -0.72
VAMP1-201ENST00000361716 TREML4Q6UXN2 200 aa10.54□□□□□ -0.72
VAMP1-201ENST00000361716 GGNQ86UU5 652 aa10.54□□□□□ -0.72
VAMP1-201ENST00000361716 OR1B1Q8NGR6 318 aa10.54□□□□□ -0.72
VAMP1-201ENST00000361716 B4GALT7Q9UBV7 327 aa10.54□□□□□ -0.72
VAMP1-201ENST00000361716 LAMTOR5O43504 91 aa10.54□□□□□ -0.72
VAMP1-201ENST00000361716 KLF7O75840 302 aaPredicted RBP10.54□□□□□ -0.72
VAMP1-201ENST00000361716 ESDP10768 282 aa10.54□□□□□ -0.72
VAMP1-201ENST00000361716 MRPL49Q13405 166 aaKnown RBP10.54□□□□□ -0.72
VAMP1-201ENST00000361716 BVES-AS1Q5T3Y7 98 aa10.54□□□□□ -0.72
VAMP1-201ENST00000361716 DCAF12Q5T6F0 453 aa10.54□□□□□ -0.72
VAMP1-201ENST00000361716 MRPL14Q6P1L8 145 aaKnown RBP10.54□□□□□ -0.72
VAMP1-201ENST00000361716 OR4F17Q8NGA8 305 aa10.54□□□□□ -0.72
VAMP1-201ENST00000361716 MGST2Q99735 147 aa10.54□□□□□ -0.72
VAMP1-201ENST00000361716 WDR83OSQ9Y284 106 aa10.54□□□□□ -0.72
VAMP1-201ENST00000361716 ZFHX4Q86UP3 3567 aa10.54□□□□□ -0.72
VAMP1-201ENST00000361716 INTS1Q8N201 2190 aaKnown RBP10.54□□□□□ -0.72
VAMP1-201ENST00000361716 IGLV3-32A0A0A0MS00 114 aa10.54□□□□□ -0.72
VAMP1-201ENST00000361716 PNKDQ8N490 385 aa10.54□□□□□ -0.72
VAMP1-201ENST00000361716 KCNE4Q8WWG9 221 aa10.54□□□□□ -0.72
VAMP1-201ENST00000361716 IMMP1LQ96LU5 166 aa10.54□□□□□ -0.72
VAMP1-201ENST00000361716 MGAQ8IWI9 3026 aa10.53□□□□□ -0.72
VAMP1-201ENST00000361716 C15orf62A8K5M9 175 aa10.53□□□□□ -0.72
VAMP1-201ENST00000361716 K7ESF4 209 aa10.53□□□□□ -0.72
VAMP1-201ENST00000361716 HAND1O96004 215 aa10.53□□□□□ -0.72
VAMP1-201ENST00000361716 STAG3L2P0CL84 134 aa10.53□□□□□ -0.72
VAMP1-201ENST00000361716 STAG3L3P0CL85 134 aa10.53□□□□□ -0.72
VAMP1-201ENST00000361716 RAB31Q13636 194 aa10.53□□□□□ -0.72
VAMP1-201ENST00000361716 SPATA12Q7Z6I5 190 aa10.53□□□□□ -0.72
VAMP1-201ENST00000361716 MDP1Q86V88 176 aa10.53□□□□□ -0.72
VAMP1-201ENST00000361716 SPSB4Q96A44 273 aa10.53□□□□□ -0.72
VAMP1-201ENST00000361716 ENY2Q9NPA8 101 aa10.53□□□□□ -0.72
VAMP1-201ENST00000361716 FAM90A26D6RGX4 464 aa10.53□□□□□ -0.72
VAMP1-201ENST00000361716 ZNF207O43670 478 aaKnown RBP10.53□□□□□ -0.72
VAMP1-201ENST00000361716 LEPROTL1O95214 131 aa10.53□□□□□ -0.72
VAMP1-201ENST00000361716 C12orf54Q6X4T0 127 aa10.53□□□□□ -0.72
VAMP1-201ENST00000361716 RTL8AQ9BWD3 113 aa10.53□□□□□ -0.72
VAMP1-201ENST00000361716 ZNF391Q9UJN7 358 aa10.53□□□□□ -0.72
VAMP1-201ENST00000361716 FAM231BA6NCW3 169 aa10.52□□□□□ -0.72
VAMP1-201ENST00000361716 IGHV3-48P01763 117 aa10.52□□□□□ -0.72
VAMP1-201ENST00000361716 HOXC12P31275 282 aa10.52□□□□□ -0.72
VAMP1-201ENST00000361716 EFNB3Q15768 340 aa10.52□□□□□ -0.72
VAMP1-201ENST00000361716 SCCPDHQ8NBX0 429 aa10.52□□□□□ -0.72
VAMP1-201ENST00000361716 GGTLC1Q9BX51 225 aa10.52□□□□□ -0.72
VAMP1-201ENST00000361716 C1QTNF5Q9BXJ0 243 aa10.52□□□□□ -0.72
VAMP1-201ENST00000361716 TRBV9A0A0B4J1U6 114 aa10.52□□□□□ -0.73
VAMP1-201ENST00000361716 C10orf142B7Z368 130 aa10.52□□□□□ -0.73
VAMP1-201ENST00000361716 TIMM8AO60220 97 aaPredicted RBP10.52□□□□□ -0.73
VAMP1-201ENST00000361716 OR9G9P0C7N8 305 aa10.52□□□□□ -0.73
VAMP1-201ENST00000361716 PLP1P60201 277 aa10.52□□□□□ -0.73
VAMP1-201ENST00000361716 RNPS1Q15287 305 aaKnown RBP10.52□□□□□ -0.73
VAMP1-201ENST00000361716 MORN2Q502X0 79 aa10.52□□□□□ -0.73
VAMP1-201ENST00000361716 SAMD13Q5VXD3 122 aa10.52□□□□□ -0.73
VAMP1-201ENST00000361716 PEF1Q9UBV8 284 aaKnown RBP10.52□□□□□ -0.73
VAMP1-201ENST00000361716 LRP4O75096 1905 aa10.52□□□□□ -0.73
VAMP1-201ENST00000361716 IGFBP2P18065 325 aa10.52□□□□□ -0.73
VAMP1-201ENST00000361716 SMIM21Q3B7S5 101 aa10.52□□□□□ -0.73
VAMP1-201ENST00000361716 FER1L6-AS1Q8NA97 138 aa10.52□□□□□ -0.73
VAMP1-201ENST00000361716 ACACAQ13085 2346 aa10.52□□□□□ -0.73
VAMP1-201ENST00000361716 TMEM265A0A087WTH1 108 aa10.51□□□□□ -0.73
VAMP1-201ENST00000361716 HBZP02008 142 aa10.51□□□□□ -0.73
VAMP1-201ENST00000361716 GPR12P47775 334 aa10.51□□□□□ -0.73
VAMP1-201ENST00000361716 ERVK-16P61578 105 aa10.51□□□□□ -0.73
VAMP1-201ENST00000361716 FOXL2NBQ6ZUU3 175 aa10.51□□□□□ -0.73
VAMP1-201ENST00000361716 LHFPL4Q7Z7J7 247 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms