RNA–Protein interactions for RNA: ENST00000358771.4

SIRPA-202, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-202ENST00000358771 APOBEC3AP31941 199 aaPredicted RBP11.73□□□□□ -0.53
SIRPA-202ENST00000358771 RPL23P62829 140 aaKnown RBP11.73□□□□□ -0.53
SIRPA-202ENST00000358771 PQLC2Q6ZP29 291 aa11.73□□□□□ -0.53
SIRPA-202ENST00000358771 CYP2G1PQ6ZSU1 146 aa11.73□□□□□ -0.53
SIRPA-202ENST00000358771 PNKDQ8N490 385 aa11.73□□□□□ -0.53
SIRPA-202ENST00000358771 PRSS33Q8NF86 280 aa11.73□□□□□ -0.53
SIRPA-202ENST00000358771 MBD3L1Q8WWY6 194 aa11.73□□□□□ -0.53
SIRPA-202ENST00000358771 DERL1Q9BUN8 251 aa11.73□□□□□ -0.53
SIRPA-202ENST00000358771 SEBOXQ9HB31 216 aaPredicted RBP11.73□□□□□ -0.53
SIRPA-202ENST00000358771 GAMTQ14353 236 aa11.73□□□□□ -0.53
SIRPA-202ENST00000358771 TBR1Q16650 682 aa11.73□□□□□ -0.53
SIRPA-202ENST00000358771 H0Y8G0 127 aa11.73□□□□□ -0.53
SIRPA-202ENST00000358771 SLC17A3O00476 420 aa11.73□□□□□ -0.53
SIRPA-202ENST00000358771 SMIM6P0DI80 62 aa11.73□□□□□ -0.53
SIRPA-202ENST00000358771 AGAP20933 346 aa11.73□□□□□ -0.53
SIRPA-202ENST00000358771 SPATA31B1PQ5VZV4 182 aa11.73□□□□□ -0.53
SIRPA-202ENST00000358771 GAFA1Q96PS6 74 aa11.73□□□□□ -0.53
SIRPA-202ENST00000358771 C1QTNF9P0C862 333 aa11.72□□□□□ -0.53
SIRPA-202ENST00000358771 ZNF726P1Q15940 193 aa11.72□□□□□ -0.53
SIRPA-202ENST00000358771 SSX7Q7RTT5 188 aa11.72□□□□□ -0.53
SIRPA-202ENST00000358771 TNRC6AQ8NDV7 1962 aaKnown RBP11.72□□□□□ -0.53
SIRPA-202ENST00000358771 PMCHP20382 165 aa11.72□□□□□ -0.53
SIRPA-202ENST00000358771 USF1P22415 310 aaPredicted RBP11.72□□□□□ -0.53
SIRPA-202ENST00000358771 RELBQ01201 579 aa11.72□□□□□ -0.53
SIRPA-202ENST00000358771 DAZAP2Q15038 168 aaPredicted RBP11.72□□□□□ -0.53
SIRPA-202ENST00000358771 FBXL15Q9H469 300 aa11.72□□□□□ -0.53
SIRPA-202ENST00000358771 SEPSECSQ9HD40 501 aaKnown RBP11.72□□□□□ -0.53
SIRPA-202ENST00000358771 TRBV23-1A0A0A0MS06 115 aa11.71□□□□□ -0.53
SIRPA-202ENST00000358771 IGHV3-35A0A0C4DH35 117 aa11.71□□□□□ -0.53
SIRPA-202ENST00000358771 PDPNQ86YL7 162 aa11.71□□□□□ -0.53
SIRPA-202ENST00000358771 CXorf65A6NEN9 183 aa11.71□□□□□ -0.53
SIRPA-202ENST00000358771 SNURFLB1AK76 121 aa11.71□□□□□ -0.53
SIRPA-202ENST00000358771 OR5I1Q13606 314 aa11.71□□□□□ -0.53
SIRPA-202ENST00000358771 Q56UQ5 140 aa11.71□□□□□ -0.53
SIRPA-202ENST00000358771 GFI1BQ5VTD9 330 aa11.71□□□□□ -0.53
SIRPA-202ENST00000358771 TMEM200BQ69YZ2 307 aa11.71□□□□□ -0.53
SIRPA-202ENST00000358771 PAXXQ9BUH6 204 aa11.71□□□□□ -0.53
SIRPA-202ENST00000358771 GGTLC1Q9BX51 225 aa11.71□□□□□ -0.53
SIRPA-202ENST00000358771 TUBA4BQ9H853 241 aa11.71□□□□□ -0.53
SIRPA-202ENST00000358771 TNFRSF19Q9NS68 423 aa11.71□□□□□ -0.53
SIRPA-202ENST00000358771 C15orf65H3BRN8 121 aa11.71□□□□□ -0.54
SIRPA-202ENST00000358771 TM4SF5O14894 197 aa11.71□□□□□ -0.54
SIRPA-202ENST00000358771 PAX6P26367 422 aa11.71□□□□□ -0.54
SIRPA-202ENST00000358771 HEPN1Q6WQI6 88 aa11.71□□□□□ -0.54
SIRPA-202ENST00000358771 KDF1Q8NAX2 398 aaPredicted RBP11.71□□□□□ -0.54
SIRPA-202ENST00000358771 OR1L4Q8NGR5 311 aa11.71□□□□□ -0.54
SIRPA-202ENST00000358771 B9A039 149 aa11.7□□□□□ -0.54
SIRPA-202ENST00000358771 DLL1O00548 723 aa11.7□□□□□ -0.54
SIRPA-202ENST00000358771 SCGB2A1O75556 95 aa11.7□□□□□ -0.54
SIRPA-202ENST00000358771 KIAA1644Q3SXP7 199 aa11.7□□□□□ -0.54
SIRPA-202ENST00000358771 IGFL2Q6UWQ7 119 aa11.7□□□□□ -0.54
SIRPA-202ENST00000358771 ZNF788Q6ZQV5 615 aa11.7□□□□□ -0.54
SIRPA-202ENST00000358771 OR8I2Q8N0Y5 310 aa11.7□□□□□ -0.54
SIRPA-202ENST00000358771 TMEM186Q96B77 213 aa11.7□□□□□ -0.54
SIRPA-202ENST00000358771 FRYQ5TBA9 3013 aa11.7□□□□□ -0.54
SIRPA-202ENST00000358771 GRIFINA4D1Z8 144 aa11.7□□□□□ -0.54
SIRPA-202ENST00000358771 UPK2O00526 184 aa11.7□□□□□ -0.54
SIRPA-202ENST00000358771 IGLV2-14P01704 120 aa11.7□□□□□ -0.54
SIRPA-202ENST00000358771 MC5RP33032 325 aa11.7□□□□□ -0.54
SIRPA-202ENST00000358771 CD81P60033 236 aa11.7□□□□□ -0.54
SIRPA-202ENST00000358771 KRTDAPP60985 99 aa11.7□□□□□ -0.54
SIRPA-202ENST00000358771 LY6DQ14210 128 aa11.7□□□□□ -0.54
SIRPA-202ENST00000358771 FAM90A2PQ658T7 463 aa11.7□□□□□ -0.54
SIRPA-202ENST00000358771 ETFRF1Q6IPR1 90 aa11.7□□□□□ -0.54
SIRPA-202ENST00000358771 DSPP15924 2871 aaKnown RBP11.7□□□□□ -0.54
SIRPA-202ENST00000358771 RBFOX2O43251 390 aaKnown RBP eCLIP11.7□□□□□ -0.54
SIRPA-202ENST00000358771 OSR1Q8TAX0 266 aaPredicted RBP11.7□□□□□ -0.54
SIRPA-202ENST00000358771 FAM222BQ8WU58 562 aa11.7□□□□□ -0.54
SIRPA-202ENST00000358771 AGMATQ9BSE5 352 aa11.7□□□□□ -0.54
SIRPA-202ENST00000358771 DNAJC4Q9NNZ3 241 aa11.7□□□□□ -0.54
SIRPA-202ENST00000358771 COL5A1P20908 1838 aaPredicted RBP11.7□□□□□ -0.54
SIRPA-202ENST00000358771 KIAA1549Q9HCM3 1950 aa11.7□□□□□ -0.54
SIRPA-202ENST00000358771 TRAV34A0A0B4J273 112 aa11.69□□□□□ -0.54
SIRPA-202ENST00000358771 NUBP1P53384 320 aa11.69□□□□□ -0.54
SIRPA-202ENST00000358771 RPEL1Q2QD12 228 aa11.69□□□□□ -0.54
SIRPA-202ENST00000358771 IGFL3Q6UXB1 125 aa11.69□□□□□ -0.54
SIRPA-202ENST00000358771 ZNF705AQ6ZN79 300 aaPredicted RBP11.69□□□□□ -0.54
SIRPA-202ENST00000358771 MGST2Q99735 147 aa11.69□□□□□ -0.54
SIRPA-202ENST00000358771 PITPNC1Q9UKF7 332 aa11.69□□□□□ -0.54
SIRPA-202ENST00000358771 PTPN13Q12923 2485 aa11.69□□□□□ -0.54
SIRPA-202ENST00000358771 CRISP2P16562 243 aa11.69□□□□□ -0.54
SIRPA-202ENST00000358771 EFNB3Q15768 340 aa11.69□□□□□ -0.54
SIRPA-202ENST00000358771 C22orf34Q6ZV56 151 aa11.69□□□□□ -0.54
SIRPA-202ENST00000358771 SSBP3Q9BWW4 388 aaPredicted RBP11.69□□□□□ -0.54
SIRPA-202ENST00000358771 HIST1H2BKO60814 126 aa11.69□□□□□ -0.54
SIRPA-202ENST00000358771 HIST1H2BJP06899 126 aa11.69□□□□□ -0.54
SIRPA-202ENST00000358771 C8orf88P0DMB2 117 aa11.69□□□□□ -0.54
SIRPA-202ENST00000358771 HIST1H2BOP23527 126 aa11.69□□□□□ -0.54
SIRPA-202ENST00000358771 HIST1H2BBP33778 126 aa11.69□□□□□ -0.54
SIRPA-202ENST00000358771 HIST1H2BDP58876 126 aa11.69□□□□□ -0.54
SIRPA-202ENST00000358771 HIST1H2BCP62807 126 aa11.69□□□□□ -0.54
SIRPA-202ENST00000358771 HIST2H2BEQ16778 126 aa11.69□□□□□ -0.54
SIRPA-202ENST00000358771 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.69□□□□□ -0.54
SIRPA-202ENST00000358771 HIST1H2BHQ93079 126 aa11.69□□□□□ -0.54
SIRPA-202ENST00000358771 MS4A10Q96PG2 267 aa11.69□□□□□ -0.54
SIRPA-202ENST00000358771 HIST1H2BNQ99877 126 aa11.69□□□□□ -0.54
SIRPA-202ENST00000358771 HIST1H2BMQ99879 126 aa11.69□□□□□ -0.54
SIRPA-202ENST00000358771 RASL11BQ9BPW5 248 aa11.69□□□□□ -0.54
SIRPA-202ENST00000358771 TMUB1Q9BVT8 246 aa11.69□□□□□ -0.54
SIRPA-202ENST00000358771 TMEM178BH3BS89 294 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms