RNA–Protein interactions for RNA: ENST00000358438.6

POLR2J2-202, Transcript of RNA polymerase II subunit J2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J2, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2-202ENST00000358438 COMPP49747 757 aaPredicted RBP18.38■□□□□ 0.53
POLR2J2-202ENST00000358438 TRAT1Q6PIZ9 186 aa18.38■□□□□ 0.53
POLR2J2-202ENST00000358438 DEFB108BQ8NET1 73 aa18.38■□□□□ 0.53
POLR2J2-202ENST00000358438 SGMS2Q8NHU3 365 aa18.38■□□□□ 0.53
POLR2J2-202ENST00000358438 SFRP2Q96HF1 295 aa18.38■□□□□ 0.53
POLR2J2-202ENST00000358438 IGKV1-5P01602 117 aa18.37■□□□□ 0.53
POLR2J2-202ENST00000358438 CTRLP40313 264 aa18.37■□□□□ 0.53
POLR2J2-202ENST00000358438 LINC00310P59036 64 aa18.37■□□□□ 0.53
POLR2J2-202ENST00000358438 OR2D3Q8NGH3 330 aa18.37■□□□□ 0.53
POLR2J2-202ENST00000358438 OR51H1Q8NH63 302 aa18.37■□□□□ 0.53
POLR2J2-202ENST00000358438 VN1R17PQ8TDU5 208 aa18.37■□□□□ 0.53
POLR2J2-202ENST00000358438 DCTN5Q9BTE1 182 aa18.37■□□□□ 0.53
POLR2J2-202ENST00000358438 PATZ1Q9HBE1 687 aaKnown RBP18.37■□□□□ 0.53
POLR2J2-202ENST00000358438 ARFGEF3Q5TH69 2177 aa18.37■□□□□ 0.53
POLR2J2-202ENST00000358438 FFAR4Q5NUL3 377 aa18.37■□□□□ 0.53
POLR2J2-202ENST00000358438 LIN7CQ9NUP9 197 aaKnown RBP18.37■□□□□ 0.53
POLR2J2-202ENST00000358438 RBM7Q9Y580 266 aaKnown RBP18.37■□□□□ 0.53
POLR2J2-202ENST00000358438 TRBV9A0A0B4J1U6 114 aa18.36■□□□□ 0.53
POLR2J2-202ENST00000358438 IGLV2-14P01704 120 aa18.36■□□□□ 0.53
POLR2J2-202ENST00000358438 LOXP28300 417 aaPredicted RBP18.36■□□□□ 0.53
POLR2J2-202ENST00000358438 ZNF672Q499Z4 452 aaPredicted RBP18.36■□□□□ 0.53
POLR2J2-202ENST00000358438 GATAD1Q8WUU5 269 aa18.36■□□□□ 0.53
POLR2J2-202ENST00000358438 CFAP46Q8IYW2 2715 aa18.36■□□□□ 0.53
POLR2J2-202ENST00000358438 SERF1AO75920 110 aa18.35■□□□□ 0.53
POLR2J2-202ENST00000358438 TOMM40O96008 361 aa18.35■□□□□ 0.53
POLR2J2-202ENST00000358438 EDDM3BP56851 147 aa18.35■□□□□ 0.53
POLR2J2-202ENST00000358438 OR52L2PQ8NGH6 319 aa18.35■□□□□ 0.53
POLR2J2-202ENST00000358438 GAFA1Q96PS6 74 aa18.35■□□□□ 0.53
POLR2J2-202ENST00000358438 TMEM204Q9BSN7 226 aa18.35■□□□□ 0.53
POLR2J2-202ENST00000358438 ZNF586Q9NXT0 402 aa18.35■□□□□ 0.53
POLR2J2-202ENST00000358438 C17orf112F2Z3M2 114 aa18.35■□□□□ 0.53
POLR2J2-202ENST00000358438 C15orf65H3BRN8 121 aa18.35■□□□□ 0.53
POLR2J2-202ENST00000358438 SPINT2O43291 252 aa18.35■□□□□ 0.53
POLR2J2-202ENST00000358438 ZG16O60844 167 aa18.35■□□□□ 0.53
POLR2J2-202ENST00000358438 CDKN1AP38936 164 aa18.35■□□□□ 0.53
POLR2J2-202ENST00000358438 GNB1P62873 340 aa18.35■□□□□ 0.53
POLR2J2-202ENST00000358438 CR1LQ2VPA4 569 aa18.35■□□□□ 0.53
POLR2J2-202ENST00000358438 DUX4L9Q6RFH8 374 aaPredicted RBP18.35■□□□□ 0.53
POLR2J2-202ENST00000358438 ZNF788Q6ZQV5 615 aa18.35■□□□□ 0.53
POLR2J2-202ENST00000358438 MUC15Q8N387 334 aa18.35■□□□□ 0.53
POLR2J2-202ENST00000358438 ZNF808Q8N4W9 903 aaPredicted RBP18.35■□□□□ 0.53
POLR2J2-202ENST00000358438 RAB1CQ92928 201 aa18.35■□□□□ 0.53
POLR2J2-202ENST00000358438 NINJ1Q92982 152 aa18.35■□□□□ 0.53
POLR2J2-202ENST00000358438 CCL13Q99616 98 aa18.35■□□□□ 0.53
POLR2J2-202ENST00000358438 TFPI2P48307 235 aa18.34■□□□□ 0.53
POLR2J2-202ENST00000358438 PTTG1IPP53801 180 aa18.34■□□□□ 0.53
POLR2J2-202ENST00000358438 VWC2Q2TAL6 325 aa18.34■□□□□ 0.53
POLR2J2-202ENST00000358438 ZNF709Q8N972 641 aa18.34■□□□□ 0.53
POLR2J2-202ENST00000358438 RFESDQ8TAC1 157 aa18.34■□□□□ 0.53
POLR2J2-202ENST00000358438 CCL17Q92583 94 aa18.34■□□□□ 0.53
POLR2J2-202ENST00000358438 TMEM178BH3BS89 294 aa18.34■□□□□ 0.53
POLR2J2-202ENST00000358438 CLDN14O95500 239 aa18.34■□□□□ 0.53
POLR2J2-202ENST00000358438 SUMO1P63165 101 aaKnown RBP18.34■□□□□ 0.53
POLR2J2-202ENST00000358438 IZUMO4Q1ZYL8 232 aa18.34■□□□□ 0.53
POLR2J2-202ENST00000358438 SAMD10Q9BYL1 202 aa18.34■□□□□ 0.53
POLR2J2-202ENST00000358438 FAM234AQ9H0X4 552 aa18.34■□□□□ 0.53
POLR2J2-202ENST00000358438 GSX1Q9H4S2 264 aaPredicted RBP18.34■□□□□ 0.53
POLR2J2-202ENST00000358438 KCNS2Q9ULS6 477 aa18.34■□□□□ 0.53
POLR2J2-202ENST00000358438 TANC2Q9HCD6 1990 aa18.33■□□□□ 0.52
POLR2J2-202ENST00000358438 SAA2-SAA4A0A096LPE2 208 aa18.33■□□□□ 0.52
POLR2J2-202ENST00000358438 NDUFB8O95169 186 aa18.33■□□□□ 0.52
POLR2J2-202ENST00000358438 HTD2P86397 168 aa18.33■□□□□ 0.52
POLR2J2-202ENST00000358438 FAM53AQ6NSI3 398 aaPredicted RBP18.33■□□□□ 0.52
POLR2J2-202ENST00000358438 ZNF843Q8N446 348 aa18.33■□□□□ 0.52
POLR2J2-202ENST00000358438 FAM216BQ8N7L0 139 aa18.33■□□□□ 0.52
POLR2J2-202ENST00000358438 ITLN2Q8WWU7 325 aaPredicted RBP18.33■□□□□ 0.52
POLR2J2-202ENST00000358438 NCOR1P1Q9H4R4 102 aa18.33■□□□□ 0.52
POLR2J2-202ENST00000358438 TRAV38-1A0A0B4J264 116 aa18.32■□□□□ 0.52
POLR2J2-202ENST00000358438 GRIFINA4D1Z8 144 aa18.32■□□□□ 0.52
POLR2J2-202ENST00000358438 HMGB3O15347 200 aaKnown RBP18.32■□□□□ 0.52
POLR2J2-202ENST00000358438 REG1AP05451 166 aa18.32■□□□□ 0.52
POLR2J2-202ENST00000358438 OR5G3P0C626 314 aa18.32■□□□□ 0.52
POLR2J2-202ENST00000358438 CDC34P49427 236 aaPredicted RBP18.32■□□□□ 0.52
POLR2J2-202ENST00000358438 OR8G2PQ6IF36 304 aa18.32■□□□□ 0.52
POLR2J2-202ENST00000358438 SIGLECL1Q8N7X8 197 aa18.32■□□□□ 0.52
POLR2J2-202ENST00000358438 OR5T1Q8NG75 326 aa18.32■□□□□ 0.52
POLR2J2-202ENST00000358438 OR10G8Q8NGN5 311 aa18.32■□□□□ 0.52
POLR2J2-202ENST00000358438 RNASE8Q8TDE3 154 aaKnown RBP18.32■□□□□ 0.52
POLR2J2-202ENST00000358438 MRPL18Q9H0U6 180 aaKnown RBP18.32■□□□□ 0.52
POLR2J2-202ENST00000358438 HSPB7Q9UBY9 170 aa18.32■□□□□ 0.52
POLR2J2-202ENST00000358438 DSCAML1Q8TD84 2053 aa18.32■□□□□ 0.52
POLR2J2-202ENST00000358438 SPTBN1Q01082 2364 aaKnown RBP18.32■□□□□ 0.52
POLR2J2-202ENST00000358438 A0A1W2PN81 502 aa18.32■□□□□ 0.52
POLR2J2-202ENST00000358438 UBE2V1Q13404 147 aa18.32■□□□□ 0.52
POLR2J2-202ENST00000358438 MORN2Q502X0 79 aa18.32■□□□□ 0.52
POLR2J2-202ENST00000358438 BAGE3Q86Y29 109 aa18.32■□□□□ 0.52
POLR2J2-202ENST00000358438 BAGE2Q86Y30 109 aa18.32■□□□□ 0.52
POLR2J2-202ENST00000358438 KLHDC1Q8N7A1 406 aa18.32■□□□□ 0.52
POLR2J2-202ENST00000358438 Q8N976 141 aa18.32■□□□□ 0.52
POLR2J2-202ENST00000358438 IL36BQ9NZH7 164 aa18.32■□□□□ 0.52
POLR2J2-202ENST00000358438 LAMTOR2Q9Y2Q5 125 aa18.32■□□□□ 0.52
POLR2J2-202ENST00000358438 PPIAL4EA0A075B759 164 aa18.31■□□□□ 0.52
POLR2J2-202ENST00000358438 PPIAL4DF5H284 164 aa18.31■□□□□ 0.52
POLR2J2-202ENST00000358438 CLDN1O95832 211 aa18.31■□□□□ 0.52
POLR2J2-202ENST00000358438 PPIAL4FP0DN26 164 aa18.31■□□□□ 0.52
POLR2J2-202ENST00000358438 ZNF585BQ52M93 769 aa18.31■□□□□ 0.52
POLR2J2-202ENST00000358438 TCF23Q7RTU1 214 aa18.31■□□□□ 0.52
POLR2J2-202ENST00000358438 PPIAL4AQ9Y536 164 aa18.31■□□□□ 0.52
POLR2J2-202ENST00000358438 IGHV3-43A0A0B4J1X8 118 aa18.3■□□□□ 0.52
POLR2J2-202ENST00000358438 RNF212BA8MTL3 300 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms